Header list of 2u2a.pdb file
Complete list - 16 202 Bytes
HEADER RNA 20-AUG-97 2U2A
TITLE STEM LOOP IIA FROM U2 SNRNA OF SACCHAROMYCES CEREVISIAE, NMR,
TITLE 2 MINIMIZED AVERAGE STRUCTURE
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: RNA (5'-
COMPND 3 R(P*GP*GP*UP*CP*AP*GP*UP*GP*UP*AP*AP*CP*AP*AP*CP*UP*GP*AP*CP*C)-3');
COMPND 4 CHAIN: A;
COMPND 5 FRAGMENT: STEM LOOP IIA;
COMPND 6 ENGINEERED: YES;
COMPND 7 MUTATION: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE;
SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST;
SOURCE 4 ORGANISM_TAXID: 4932;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: T7;
SOURCE 8 OTHER_DETAILS: MOLECULE TRANSCRIBED FROM A PARTIALLY SINGLE-STRANDED
SOURCE 9 DNA TEMPLATE USING T7 RNA POLYMERASE
KEYWDS PRE-MRNA SPLICING, U2SNRNA, U-TURN, RNA-PROTEIN INTERACTIONS,
KEYWDS 2 RIBONUCLEIC ACID, RNA
EXPDTA SOLUTION NMR
AUTHOR S.C.STALLINGS,P.B.MOORE
REVDAT 3 16-MAR-22 2U2A 1 REMARK
REVDAT 2 24-FEB-09 2U2A 1 VERSN
REVDAT 1 04-MAR-98 2U2A 0
JRNL AUTH S.C.STALLINGS,P.B.MOORE
JRNL TITL THE STRUCTURE OF AN ESSENTIAL SPLICING ELEMENT: STEM LOOP
JRNL TITL 2 IIA FROM YEAST U2 SNRNA.
JRNL REF STRUCTURE V. 5 1173 1997
JRNL REFN ISSN 0969-2126
JRNL PMID 9331416
JRNL DOI 10.1016/S0969-2126(97)00268-2
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH M.I.ZAVANELLI,M.ARES JUNIOR
REMARK 1 TITL EFFICIENT ASSOCIATION OF U2 SNRNPS WITH PRE-MRNA REQUIRES AN
REMARK 1 TITL 2 ESSENTIAL U2 RNA STRUCTURAL ELEMENT
REMARK 1 REF GENES DEV. V. 5 2521 1991
REMARK 1 REFN ISSN 0890-9369
REMARK 1 REFERENCE 2
REMARK 1 AUTH M.ARES JUNIOR,A.H.IGEL
REMARK 1 TITL LETHAL AND TEMPERATURE-SENSITIVE MUTATIONS AND THEIR
REMARK 1 TITL 2 SUPPRESSORS IDENTIFY AN ESSENTIAL STRUCTURAL ELEMENT IN U2
REMARK 1 TITL 3 SMALL NUCLEAR RNA
REMARK 1 REF GENES DEV. V. 4 2132 1990
REMARK 1 REFN ISSN 0890-9369
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : X-PLOR 3.851
REMARK 3 AUTHORS : BRUNGER
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT WAS DONE USING TORSION ANGLE
REMARK 3 MOLECULAR DYNAMICS. DETAILS OF THE PROTOCOL CAN BE FOUND IN THE
REMARK 3 STRUCTURE CITATION ABOVE.
REMARK 4
REMARK 4 2U2A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 100 THE DEPOSITION ID IS D_1000178716.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 303
REMARK 210 PH : 7.6
REMARK 210 IONIC STRENGTH : 75 MM
REMARK 210 PRESSURE : 1 ATM SOLVENT SYSTEM : 10MM
REMARK 210 KH2PO4, 50 MM KCL, 15 MM NACL,
REMARK 210 0.5 MM EDTA ATM
REMARK 210 SAMPLE CONTENTS : NULL
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY(D2O); NOESY(H2)); DQF
REMARK 210 -COSY; HP-COSY; HCP SPIN-ECHO
REMARK 210 DIFFERENCE; CH CT-HSQC; 3D HCCH-
REMARK 210 TOCSY; HCCH-COSY
REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ
REMARK 210 SPECTROMETER MODEL : OMEGA500; UNITY+600
REMARK 210 SPECTROMETER MANUFACTURER : GE; VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : FELIX95, XPLOR3.851
REMARK 210 METHOD USED : MOLECULAR DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 15
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1
REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATIONS
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O6 G A 1 H41 C A 20 1.47
REMARK 500 N1 A A 5 H3 U A 16 1.54
REMARK 500 H21 G A 1 O2 C A 20 1.58
REMARK 500 H21 G A 6 O2 C A 15 1.58
REMARK 500 H3 U A 3 N1 A A 18 1.59
REMARK 500 H1 G A 1 N3 C A 20 1.60
REMARK 500 O4 U A 7 H61 A A 14 1.60
REMARK 500 H21 G A 2 O2 C A 19 1.60
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1U2A RELATED DB: PDB
REMARK 900 MINIMIZED AVERAGE STRUCTURE
DBREF 2U2A A 1 20 PDB 2U2A 2U2A 1 20
SEQRES 1 A 20 G G U C A G U G U A A C A
SEQRES 2 A 20 A C U G A C C
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
Complete list - 16 202 Bytes