Header list of 2hr9.pdb file
Complete list - r 9 2 Bytes
HEADER APOPTOSIS, METAL BINDING PROTEIN 20-JUL-06 2HR9
TITLE SOLUTION STRUCTURE OF HUMAN TRANSLATIONALLY CONTROLLED TUMOR PROTEIN
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: TRANSLATIONALLY-CONTROLLED TUMOR PROTEIN;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: TCTP, P23, HISTAMINE-RELEASING FACTOR, HRF, FORTILIN;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: TPT1;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B
KEYWDS TUMOR PROTEIN, APOPTOSIS, METAL BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR Y.FENG,D.LIU,H.YAO,J.WANG
REVDAT 4 09-MAR-22 2HR9 1 REMARK SEQADV
REVDAT 3 24-FEB-09 2HR9 1 VERSN
REVDAT 2 06-NOV-07 2HR9 1 JRNL
REVDAT 1 08-AUG-06 2HR9 0
SPRSDE 08-AUG-06 2HR9 1Y41
JRNL AUTH Y.FENG,D.LIU,H.YAO,J.WANG
JRNL TITL SOLUTION STRUCTURE AND MAPPING OF A VERY WEAK
JRNL TITL 2 CALCIUM-BINDING SITE OF HUMAN TRANSLATIONALLY CONTROLLED
JRNL TITL 3 TUMOR PROTEIN BY NMR
JRNL REF ARCH.BIOCHEM.BIOPHYS. V. 48 57 2007
JRNL REFN ISSN 0003-9861
JRNL PMID 17897616
JRNL DOI 10.1016/J.ABB.2007.08.021
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : FELIX 98.0, CNS 1.1
REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE
REMARK 3 -KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE,
REMARK 3 SIMONSON,WARREN (CNS)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 2HR9 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-JUL-06.
REMARK 100 THE DEPOSITION ID IS D_1000038668.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 308
REMARK 210 PH : 7.8
REMARK 210 IONIC STRENGTH : 200MM
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 1-2MM TCTP U-15N,13C; 200MM
REMARK 210 POTASSIUM PHOSPHATE BUFFER; 10MM
REMARK 210 EDTA; 0.01% DSS; 0.01% NAN3; 90%
REMARK 210 H2O, 10% D2O
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C
REMARK 210 -SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ
REMARK 210 SPECTROMETER MODEL : DMX
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : XWINNMR 3.5, CNS 1.1, FELIX 98.0
REMARK 210 METHOD USED : SIMULATED ANNEALING
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST
REMARK 210 ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465 MODELS 1-20
REMARK 465 RES C SSSEQI
REMARK 465 HIS A 175
REMARK 465 HIS A 176
REMARK 465 HIS A 177
REMARK 465 HIS A 178
REMARK 465 HIS A 179
REMARK 465 HIS A 180
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 GLU A 12 94.84 -58.18
REMARK 500 1 LYS A 34 125.55 -174.56
REMARK 500 1 THR A 39 40.02 179.86
REMARK 500 1 ASN A 42 78.74 -65.93
REMARK 500 1 ILE A 43 112.89 -167.25
REMARK 500 1 ALA A 54 -46.26 -155.61
REMARK 500 1 THR A 62 113.03 63.53
REMARK 500 1 GLN A 106 -62.95 -105.18
REMARK 500 1 ARG A 152 -178.66 -55.56
REMARK 500 1 THR A 157 109.17 -56.95
REMARK 500 2 GLU A 12 89.84 -56.93
REMARK 500 2 ASP A 16 31.87 -95.76
REMARK 500 2 LYS A 34 123.23 -174.49
REMARK 500 2 GLU A 40 127.10 -176.97
REMARK 500 2 ILE A 48 92.40 52.28
REMARK 500 2 ASN A 51 89.29 60.34
REMARK 500 2 ALA A 52 38.16 -97.27
REMARK 500 2 GLU A 55 -47.25 -134.04
REMARK 500 2 GLU A 58 -54.68 -160.30
REMARK 500 2 GLU A 63 -60.46 -143.31
REMARK 500 2 THR A 65 -168.28 -78.57
REMARK 500 2 PHE A 83 149.94 -171.70
REMARK 500 2 GLN A 106 -62.30 -107.36
REMARK 500 2 ASN A 128 32.10 -142.93
REMARK 500 2 ARG A 152 -178.01 -66.66
REMARK 500 2 CYS A 172 -48.46 -139.72
REMARK 500 3 GLU A 12 94.07 -56.79
REMARK 500 3 ASP A 16 36.24 -95.52
REMARK 500 3 TYR A 18 -166.85 -109.41
REMARK 500 3 LYS A 34 125.89 -174.48
REMARK 500 3 THR A 39 -56.28 -136.65
REMARK 500 3 GLU A 40 61.83 62.55
REMARK 500 3 ASP A 45 -62.66 71.31
REMARK 500 3 ALA A 52 -43.03 -169.50
REMARK 500 3 SER A 64 -173.58 -177.19
REMARK 500 3 THR A 65 -43.81 -165.79
REMARK 500 3 PHE A 83 148.56 -171.66
REMARK 500 3 ARG A 152 -177.66 -66.71
REMARK 500 4 GLU A 12 104.06 -58.03
REMARK 500 4 LYS A 34 125.98 -174.46
REMARK 500 4 GLU A 40 160.41 59.67
REMARK 500 4 ILE A 43 133.38 69.30
REMARK 500 4 ALA A 54 33.10 -98.40
REMARK 500 4 PRO A 57 43.43 -86.07
REMARK 500 4 GLU A 58 113.34 60.62
REMARK 500 4 GLU A 60 -47.91 -130.43
REMARK 500 4 ASN A 128 31.68 -142.47
REMARK 500 4 CYS A 172 140.84 -171.27
REMARK 500 5 GLU A 12 96.84 -57.12
REMARK 500 5 GLU A 40 -73.86 66.15
REMARK 500
REMARK 500 THIS ENTRY HAS 265 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
DBREF 2HR9 A 1 172 UNP P13693 TCTP_HUMAN 1 172
SEQADV 2HR9 LEU A 173 UNP P13693 EXPRESSION TAG
SEQADV 2HR9 GLU A 174 UNP P13693 EXPRESSION TAG
SEQADV 2HR9 HIS A 175 UNP P13693 EXPRESSION TAG
SEQADV 2HR9 HIS A 176 UNP P13693 EXPRESSION TAG
SEQADV 2HR9 HIS A 177 UNP P13693 EXPRESSION TAG
SEQADV 2HR9 HIS A 178 UNP P13693 EXPRESSION TAG
SEQADV 2HR9 HIS A 179 UNP P13693 EXPRESSION TAG
SEQADV 2HR9 HIS A 180 UNP P13693 EXPRESSION TAG
SEQRES 1 A 180 MET ILE ILE TYR ARG ASP LEU ILE SER HIS ASP GLU MET
SEQRES 2 A 180 PHE SER ASP ILE TYR LYS ILE ARG GLU ILE ALA ASP GLY
SEQRES 3 A 180 LEU CYS LEU GLU VAL GLU GLY LYS MET VAL SER ARG THR
SEQRES 4 A 180 GLU GLY ASN ILE ASP ASP SER LEU ILE GLY GLY ASN ALA
SEQRES 5 A 180 SER ALA GLU GLY PRO GLU GLY GLU GLY THR GLU SER THR
SEQRES 6 A 180 VAL ILE THR GLY VAL ASP ILE VAL MET ASN HIS HIS LEU
SEQRES 7 A 180 GLN GLU THR SER PHE THR LYS GLU ALA TYR LYS LYS TYR
SEQRES 8 A 180 ILE LYS ASP TYR MET LYS SER ILE LYS GLY LYS LEU GLU
SEQRES 9 A 180 GLU GLN ARG PRO GLU ARG VAL LYS PRO PHE MET THR GLY
SEQRES 10 A 180 ALA ALA GLU GLN ILE LYS HIS ILE LEU ALA ASN PHE LYS
SEQRES 11 A 180 ASN TYR GLN PHE PHE ILE GLY GLU ASN MET ASN PRO ASP
SEQRES 12 A 180 GLY MET VAL ALA LEU LEU ASP TYR ARG GLU ASP GLY VAL
SEQRES 13 A 180 THR PRO TYR MET ILE PHE PHE LYS ASP GLY LEU GLU MET
SEQRES 14 A 180 GLU LYS CYS LEU GLU HIS HIS HIS HIS HIS HIS
HELIX 1 1 ASP A 71 HIS A 76 1 6
HELIX 2 2 THR A 84 ARG A 107 1 24
HELIX 3 3 ARG A 110 ALA A 127 1 18
SHEET 1 A 3 GLU A 12 SER A 15 0
SHEET 2 A 3 ILE A 2 ASP A 6 -1 N TYR A 4 O PHE A 14
SHEET 3 A 3 LEU A 167 LYS A 171 -1 O GLU A 168 N ARG A 5
SHEET 1 B 6 LYS A 19 ILE A 23 0
SHEET 2 B 6 CYS A 28 GLU A 32 -1 O GLU A 30 N ARG A 21
SHEET 3 B 6 PRO A 158 PHE A 163 -1 O PHE A 162 N LEU A 29
SHEET 4 B 6 ALA A 147 TYR A 151 -1 N ASP A 150 O TYR A 159
SHEET 5 B 6 GLN A 133 ILE A 136 -1 N PHE A 135 O ALA A 147
SHEET 6 B 6 GLN A 79 THR A 81 -1 N GLN A 79 O ILE A 136
SHEET 1 C 2 MET A 35 VAL A 36 0
SHEET 2 C 2 GLY A 69 VAL A 70 -1 O GLY A 69 N VAL A 36
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 9 2 Bytes