Header list of 2hm2.pdb file
Complete list - r 9 2 Bytes
HEADER APOPTOSIS 11-JUL-06 2HM2
TITLE SOLUTION STRUCTURE OF ASC2
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: PYRIN-ONLY PROTEIN 1;
COMPND 3 CHAIN: Q;
COMPND 4 FRAGMENT: PYRIN DOMAIN;
COMPND 5 SYNONYM: ASC2; PYRIN DOMAIN CONTAINING 1; PAAD-ONLY PROTEIN;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: POP1, PYDC1;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE-30
KEYWDS PYRIN DOMAIN, SIX HELIX BUNDLE, APOPTOSIS
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR A.NATARAJAN,R.GHOSE,J.M.HILL
REVDAT 5 09-MAR-22 2HM2 1 REMARK
REVDAT 4 24-FEB-09 2HM2 1 VERSN
REVDAT 3 12-DEC-06 2HM2 1 JRNL
REVDAT 2 28-NOV-06 2HM2 1 JRNL
REVDAT 1 25-JUL-06 2HM2 0
JRNL AUTH A.NATARAJAN,R.GHOSE,J.M.HILL
JRNL TITL STRUCTURE AND DYNAMICS OF ASC2, A PYRIN DOMAIN-ONLY PROTEIN
JRNL TITL 2 THAT REGULATES INFLAMMATORY SIGNALING
JRNL REF J.BIOL.CHEM. V. 281 31863 2006
JRNL REFN ISSN 0021-9258
JRNL PMID 16905547
JRNL DOI 10.1074/JBC.M605458200
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : XPLOR-NIH 2.11.2
REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA, CLORE
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL OF
REMARK 3 1778 NMR-DERIVED RESTRAINTS, INCLUDING 1338 NOES, 197 DIHEDRAL
REMARK 3 ANGLE RESTRAINTS, 73 3J(NH-HA) COUPLING CONSTANTS AND 170 13CA/
REMARK 3 CB SECONDARY SHIFT RESTRAINTS
REMARK 4
REMARK 4 2HM2 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUL-06.
REMARK 100 THE DEPOSITION ID IS D_1000038502.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 7.3
REMARK 210 IONIC STRENGTH : 10 MM SODIUM PHOSPHATE AND 140
REMARK 210 MM NACL
REMARK 210 PRESSURE : 1 ATM
REMARK 210 SAMPLE CONTENTS : 1 MM ASC2 U-15N,13C
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : VARIOUS DOUBLE AND TRIPLE
REMARK 210 RESONANCE EXPERIMENTS
REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ
REMARK 210 SPECTROMETER MODEL : AVANCE
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NULL
REMARK 210 METHOD USED : SIMULATED ANNEALING
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 50
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST
REMARK 210 RESTRAINT VIOLATIONS,STRUCTURES
REMARK 210 WITH THE LOWEST ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: Q
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 HZ3 LYS Q 24 O LEU Q 44 1.39
REMARK 500 O ALA Q 65 H VAL Q 69 1.47
REMARK 500 O ASP Q 48 H LEU Q 52 1.48
REMARK 500 O LYS Q 22 H LYS Q 26 1.50
REMARK 500 O ASP Q 54 H ALA Q 58 1.51
REMARK 500 O THR Q 53 H VAL Q 57 1.54
REMARK 500 O LYS Q 4 H ILE Q 8 1.55
REMARK 500 O LYS Q 26 HG1 THR Q 29 1.57
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 PRO Q 17 -37.29 -32.20
REMARK 500 1 GLU Q 34 -95.24 -32.86
REMARK 500 1 PRO Q 40 146.08 -39.95
REMARK 500 1 TYR Q 61 152.37 77.56
REMARK 500 1 ALA Q 88 48.26 -73.53
REMARK 500 2 THR Q 29 -50.76 -125.67
REMARK 500 2 PRO Q 31 147.52 -39.34
REMARK 500 2 ARG Q 33 -178.37 -69.36
REMARK 500 2 GLU Q 34 -94.10 25.29
REMARK 500 2 PRO Q 40 116.61 -37.77
REMARK 500 2 LEU Q 44 4.50 -68.34
REMARK 500 2 GLN Q 46 7.04 -49.70
REMARK 500 2 ILE Q 49 -16.63 -48.35
REMARK 500 2 TYR Q 61 147.77 80.54
REMARK 500 2 MET Q 78 64.33 -113.81
REMARK 500 2 GLN Q 86 -9.41 -58.18
REMARK 500 2 ALA Q 88 40.80 -73.93
REMARK 500 3 LEU Q 44 6.48 -69.30
REMARK 500 3 GLN Q 46 5.51 -45.55
REMARK 500 3 ILE Q 49 -19.13 -47.83
REMARK 500 3 TYR Q 61 152.63 76.90
REMARK 500 3 ALA Q 88 41.01 -73.32
REMARK 500 4 PRO Q 17 -39.21 -33.99
REMARK 500 4 GLU Q 34 92.68 -65.61
REMARK 500 4 PRO Q 40 125.36 -37.82
REMARK 500 4 LEU Q 44 6.81 -69.37
REMARK 500 4 GLN Q 46 12.20 -51.16
REMARK 500 4 TYR Q 61 152.90 77.73
REMARK 500 4 ALA Q 88 -81.66 -71.28
REMARK 500 5 ARG Q 33 -172.70 -69.27
REMARK 500 5 PRO Q 40 113.12 -38.52
REMARK 500 5 LEU Q 44 1.33 -64.81
REMARK 500 5 GLN Q 46 2.30 -47.99
REMARK 500 5 TYR Q 61 155.23 75.05
REMARK 500 5 MET Q 76 32.25 -86.37
REMARK 500 5 ALA Q 88 47.61 -72.28
REMARK 500 6 GLU Q 34 -88.92 -39.00
REMARK 500 6 PRO Q 40 112.65 -39.67
REMARK 500 6 GLN Q 46 11.34 -50.88
REMARK 500 6 ILE Q 49 -18.97 -48.69
REMARK 500 6 TYR Q 61 153.44 50.72
REMARK 500 6 ARG Q 77 40.85 70.64
REMARK 500 6 ALA Q 88 46.79 -73.53
REMARK 500 7 ARG Q 33 -179.43 -67.81
REMARK 500 7 GLU Q 34 -92.17 20.22
REMARK 500 7 ARG Q 38 170.62 -59.69
REMARK 500 7 PRO Q 40 108.87 -40.89
REMARK 500 7 GLN Q 46 8.19 -50.67
REMARK 500 7 ILE Q 49 -18.09 -47.91
REMARK 500 7 TYR Q 61 150.07 78.80
REMARK 500
REMARK 500 THIS ENTRY HAS 144 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
DBREF 2HM2 Q 1 89 UNP Q8WXC3 Q8WXC3_HUMAN 1 89
SEQRES 1 Q 89 MET GLY THR LYS ARG GLU ALA ILE LEU LYS VAL LEU GLU
SEQRES 2 Q 89 ASN LEU THR PRO GLU GLU LEU LYS LYS PHE LYS MET LYS
SEQRES 3 Q 89 LEU GLY THR VAL PRO LEU ARG GLU GLY PHE GLU ARG ILE
SEQRES 4 Q 89 PRO ARG GLY ALA LEU GLY GLN LEU ASP ILE VAL ASP LEU
SEQRES 5 Q 89 THR ASP LYS LEU VAL ALA SER TYR TYR GLU ASP TYR ALA
SEQRES 6 Q 89 ALA GLU LEU VAL VAL ALA VAL LEU ARG ASP MET ARG MET
SEQRES 7 Q 89 LEU GLU GLU ALA ALA ARG LEU GLN ARG ALA ALA
HELIX 1 1 THR Q 3 GLU Q 13 1 11
HELIX 2 2 THR Q 16 LEU Q 27 1 12
HELIX 3 3 PRO Q 40 LEU Q 44 5 5
HELIX 4 4 ASP Q 48 MET Q 76 1 29
HELIX 5 5 MET Q 78 ARG Q 87 1 10
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 9 2 Bytes