Header list of 2h3k.pdb file
Complete list - g 9 2 Bytes
HEADER PROTEIN BINDING 22-MAY-06 2H3K
TITLE SOLUTION STRUCTURE OF THE FIRST NEAT DOMAIN OF ISDH
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: HAPTOGLOBIN-BINDING SURFACE ANCHORED PROTEIN;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: FIRST NEAT DOMAIN, ISDH-N1;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS;
SOURCE 3 ORGANISM_TAXID: 282459;
SOURCE 4 STRAIN: MSSA476;
SOURCE 5 GENE: SA1552;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11A
KEYWDS NEAT DOMAIN, ISDH, HARA, PROTEIN BINDING
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR R.M.PILPA,E.A.FADEEV,V.A.VILLAREAL,M.A.WONG,M.PHILLIPS,R.T.CLUBB
REVDAT 5 14-JUN-23 2H3K 1 REMARK
REVDAT 4 19-FEB-20 2H3K 1 REMARK
REVDAT 3 13-JUL-11 2H3K 1 VERSN
REVDAT 2 24-FEB-09 2H3K 1 VERSN
REVDAT 1 22-AUG-06 2H3K 0
JRNL AUTH R.M.PILPA,E.A.FADEEV,V.A.VILLAREAL,M.L.WONG,M.PHILLIPS,
JRNL AUTH 2 R.T.CLUBB
JRNL TITL SOLUTION STRUCTURE OF THE NEAT (NEAR TRANSPORTER) DOMAIN
JRNL TITL 2 FROM ISDH/HARA: THE HUMAN HEMOGLOBIN RECEPTOR IN
JRNL TITL 3 STAPHYLOCOCCUS AUREUS.
JRNL REF J.MOL.BIOL. V. 360 435 2006
JRNL REFN ISSN 0022-2836
JRNL PMID 16762363
JRNL DOI 10.1016/J.JMB.2006.05.019
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : NMRPIPE 4.3.5
REMARK 3 AUTHORS : DELAGLIO
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: 1841 EXPERIMENTALLY DERIVED RESTRAINTS
REMARK 3 (1741 NOE-DERIVED DISTANCE CONSTRAINTS, 64 DIHEDRAL ANGLE
REMARK 3 RESTRAINTS, 40 HYDROGEN BOND RESTRAINTS)
REMARK 4
REMARK 4 2H3K COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JUN-06.
REMARK 100 THE DEPOSITION ID IS D_1000037885.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 295
REMARK 210 PH : 6.0
REMARK 210 IONIC STRENGTH : 100MM NACL
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : UNIFORM LABELING WITH 15N AT 1MM
REMARK 210 IN 50MM SODIUM PHOSPHATE PH 6.0
REMARK 210 AND 100MM NACL; UNIFORM LABELING
REMARK 210 WITH 13C/15N AT 1MM IN 50MM
REMARK 210 SODIUM PHOSPHATE PH 6.0 AND
REMARK 210 100MM NACL WITH 7% D2O; UNIFORM
REMARK 210 LABELING WITH 13C/15N AT 1MM IN
REMARK 210 50MM SODIUM PHOSPHATE PH 6.0 AND
REMARK 210 100MM NACL
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C
REMARK 210 -SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ
REMARK 210 SPECTROMETER MODEL : AVANCE
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRVIEW 5.2, XWINNMR 3.5
REMARK 210 METHOD USED : DISTANCE GEOMETRY
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 200
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH ACCEPTABLE
REMARK 210 COVALENT GEOMETRY,STRUCTURES
REMARK 210 WITH FAVORABLE NON-BOND ENERGY,
REMARK 210 STRUCTURES WITH THE LEAST
REMARK 210 RESTRAINT VIOLATIONS,STRUCTURES
REMARK 210 WITH THE LOWEST ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 H VAL A 27 O ALA A 50 1.59
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 GLU A 3 -149.47 -135.17
REMARK 500 1 ASN A 16 57.23 -160.33
REMARK 500 1 ASP A 20 70.36 -162.19
REMARK 500 1 ARG A 24 149.84 -178.61
REMARK 500 1 ASP A 33 70.43 -113.84
REMARK 500 1 LYS A 34 24.97 49.75
REMARK 500 1 ASN A 35 21.64 -153.55
REMARK 500 1 ASN A 36 26.22 49.58
REMARK 500 1 SER A 45 -78.92 -100.20
REMARK 500 1 LYS A 47 -63.93 -136.15
REMARK 500 1 THR A 55 -164.93 -102.43
REMARK 500 1 LYS A 57 -70.67 -88.59
REMARK 500 1 PHE A 74 118.96 -175.98
REMARK 500 1 ASN A 79 -71.11 66.69
REMARK 500 1 ASN A 80 37.46 -172.57
REMARK 500 1 ASP A 96 84.89 46.59
REMARK 500 1 HIS A 97 117.81 -162.61
REMARK 500 1 THR A 108 122.52 -36.53
REMARK 500 1 GLU A 123 -154.60 -101.48
REMARK 500 1 PHE A 134 162.02 -47.96
REMARK 500 2 GLU A 3 -149.58 -115.66
REMARK 500 2 ASN A 16 47.61 -161.52
REMARK 500 2 ASP A 33 -150.38 -75.42
REMARK 500 2 ASN A 35 20.52 -143.41
REMARK 500 2 THR A 38 108.06 -55.83
REMARK 500 2 TYR A 41 87.58 -65.68
REMARK 500 2 HIS A 42 -161.85 -111.10
REMARK 500 2 PHE A 43 -165.41 -118.44
REMARK 500 2 SER A 45 -80.91 -177.35
REMARK 500 2 LYS A 47 -50.68 -148.17
REMARK 500 2 LYS A 57 -77.28 -102.12
REMARK 500 2 THR A 67 62.96 -103.52
REMARK 500 2 PHE A 74 127.39 -176.73
REMARK 500 2 GLU A 75 92.51 -165.71
REMARK 500 2 GLN A 81 103.56 -175.53
REMARK 500 2 ASP A 96 84.96 45.53
REMARK 500 2 HIS A 97 113.50 -162.12
REMARK 500 2 ARG A 101 143.19 -173.73
REMARK 500 2 THR A 108 128.58 -36.40
REMARK 500 2 TYR A 129 114.61 -161.63
REMARK 500 2 ASN A 140 153.13 -49.59
REMARK 500 3 GLU A 3 -150.55 -131.22
REMARK 500 3 ASN A 16 93.75 63.75
REMARK 500 3 HIS A 19 41.44 -91.63
REMARK 500 3 ILE A 21 76.21 -117.19
REMARK 500 3 ASP A 33 -146.48 -73.18
REMARK 500 3 ASN A 35 25.06 -152.07
REMARK 500 3 SER A 45 -75.45 -177.34
REMARK 500 3 LYS A 47 -47.42 -154.25
REMARK 500 3 THR A 55 -162.67 -118.28
REMARK 500
REMARK 500 THIS ENTRY HAS 406 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 1 ARG A 24 0.32 SIDE CHAIN
REMARK 500 1 ARG A 86 0.31 SIDE CHAIN
REMARK 500 1 ARG A 101 0.28 SIDE CHAIN
REMARK 500 2 ARG A 24 0.29 SIDE CHAIN
REMARK 500 2 ARG A 86 0.28 SIDE CHAIN
REMARK 500 2 ARG A 101 0.18 SIDE CHAIN
REMARK 500 3 ARG A 24 0.31 SIDE CHAIN
REMARK 500 3 ARG A 86 0.25 SIDE CHAIN
REMARK 500 3 ARG A 101 0.24 SIDE CHAIN
REMARK 500 4 ARG A 24 0.29 SIDE CHAIN
REMARK 500 4 ARG A 86 0.16 SIDE CHAIN
REMARK 500 4 ARG A 101 0.32 SIDE CHAIN
REMARK 500 5 ARG A 24 0.32 SIDE CHAIN
REMARK 500 5 ARG A 86 0.18 SIDE CHAIN
REMARK 500 5 ARG A 101 0.23 SIDE CHAIN
REMARK 500 6 ARG A 24 0.28 SIDE CHAIN
REMARK 500 6 ARG A 86 0.29 SIDE CHAIN
REMARK 500 6 ARG A 101 0.14 SIDE CHAIN
REMARK 500 7 ARG A 24 0.28 SIDE CHAIN
REMARK 500 7 ARG A 86 0.32 SIDE CHAIN
REMARK 500 7 ARG A 101 0.26 SIDE CHAIN
REMARK 500 8 ARG A 24 0.14 SIDE CHAIN
REMARK 500 8 ARG A 86 0.21 SIDE CHAIN
REMARK 500 8 ARG A 101 0.17 SIDE CHAIN
REMARK 500 9 ARG A 24 0.27 SIDE CHAIN
REMARK 500 9 ARG A 86 0.21 SIDE CHAIN
REMARK 500 9 ARG A 101 0.24 SIDE CHAIN
REMARK 500 10 ARG A 24 0.30 SIDE CHAIN
REMARK 500 10 ARG A 86 0.31 SIDE CHAIN
REMARK 500 10 ARG A 101 0.29 SIDE CHAIN
REMARK 500 11 ARG A 24 0.28 SIDE CHAIN
REMARK 500 11 ARG A 86 0.24 SIDE CHAIN
REMARK 500 11 ARG A 101 0.30 SIDE CHAIN
REMARK 500 12 ARG A 24 0.30 SIDE CHAIN
REMARK 500 12 ARG A 86 0.27 SIDE CHAIN
REMARK 500 12 ARG A 101 0.26 SIDE CHAIN
REMARK 500 13 ARG A 24 0.32 SIDE CHAIN
REMARK 500 13 ARG A 86 0.32 SIDE CHAIN
REMARK 500 13 ARG A 101 0.23 SIDE CHAIN
REMARK 500 14 ARG A 24 0.32 SIDE CHAIN
REMARK 500 14 ARG A 86 0.31 SIDE CHAIN
REMARK 500 14 ARG A 101 0.25 SIDE CHAIN
REMARK 500 15 ARG A 24 0.31 SIDE CHAIN
REMARK 500 15 ARG A 86 0.23 SIDE CHAIN
REMARK 500 15 ARG A 101 0.14 SIDE CHAIN
REMARK 500 16 ARG A 24 0.30 SIDE CHAIN
REMARK 500 16 ARG A 86 0.31 SIDE CHAIN
REMARK 500 16 ARG A 101 0.21 SIDE CHAIN
REMARK 500 17 ARG A 24 0.23 SIDE CHAIN
REMARK 500 17 ARG A 86 0.32 SIDE CHAIN
REMARK 500
REMARK 500 THIS ENTRY HAS 60 PLANE DEVIATIONS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 6759 RELATED DB: BMRB
DBREF 2H3K A 1 144 UNP Q6G8J7 Q6G8J7_STAAS 86 229
SEQRES 1 A 144 ALA ASP GLU SER LEU LYS ASP ALA ILE LYS ASP PRO ALA
SEQRES 2 A 144 LEU GLU ASN LYS GLU HIS ASP ILE GLY PRO ARG GLU GLN
SEQRES 3 A 144 VAL ASN PHE GLN LEU LEU ASP LYS ASN ASN GLU THR GLN
SEQRES 4 A 144 TYR TYR HIS PHE PHE SER ILE LYS ASP PRO ALA ASP VAL
SEQRES 5 A 144 TYR TYR THR LYS LYS LYS ALA GLU VAL GLU LEU ASP ILE
SEQRES 6 A 144 ASN THR ALA SER THR TRP LYS LYS PHE GLU VAL TYR GLU
SEQRES 7 A 144 ASN ASN GLN LYS LEU PRO VAL ARG LEU VAL SER TYR SER
SEQRES 8 A 144 PRO VAL PRO GLU ASP HIS ALA TYR ILE ARG PHE PRO VAL
SEQRES 9 A 144 SER ASP GLY THR GLN GLU LEU LYS ILE VAL SER SER THR
SEQRES 10 A 144 GLN ILE ASP ASP GLY GLU GLU THR ASN TYR ASP TYR THR
SEQRES 11 A 144 LYS LEU VAL PHE ALA LYS PRO ILE TYR ASN ASP PRO SER
SEQRES 12 A 144 LEU
HELIX 1 1 SER A 4 ILE A 9 1 6
HELIX 2 2 THR A 67 TRP A 71 5 5
SHEET 1 A 5 GLN A 26 VAL A 27 0
SHEET 2 A 5 ALA A 50 VAL A 52 -1 O ALA A 50 N VAL A 27
SHEET 3 A 5 GLU A 60 ILE A 65 -1 O GLU A 62 N ASP A 51
SHEET 4 A 5 HIS A 97 PRO A 103 -1 O ALA A 98 N ILE A 65
SHEET 5 A 5 ARG A 86 SER A 91 -1 N SER A 89 O TYR A 99
SHEET 1 B 3 PHE A 29 LEU A 32 0
SHEET 2 B 3 THR A 125 PHE A 134 -1 O VAL A 133 N GLN A 30
SHEET 3 B 3 GLU A 110 THR A 117 -1 N SER A 115 O TYR A 127
SHEET 1 C 2 VAL A 76 GLU A 78 0
SHEET 2 C 2 GLN A 81 LEU A 83 -1 O LEU A 83 N VAL A 76
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - g 9 2 Bytes