Header list of 2g31.pdb file
Complete list - r 9 2 Bytes
HEADER SIGNALING PROTEIN 17-FEB-06 2G31
TITLE HUMAN NOGO-A FUNCTIONAL DOMAIN: NOGO60
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: RETICULON-4;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: C_TERMINAL DOMAIN;
COMPND 5 SYNONYM: NOGO_A, NEURITE OUTGROWTH INHIBITOR, NOGO PROTEIN, FOOCEN,
COMPND 6 NEUROENDOCRINE-SPECIFIC PROTEIN, NSP, NEUROENDOCRINE-SPECIFIC PROTEIN
COMPND 7 C HOMOLOG, RTN-X, RETICULON-5;
COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 TISSUE: BRAIN;
SOURCE 6 GENE: NOGO;
SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21;
SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693;
SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21;
SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET32A
KEYWDS NOGO, HELIX, SIGNALING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.F.LI,J.X.LIU,J.X.SONG
REVDAT 3 09-MAR-22 2G31 1 REMARK
REVDAT 2 24-FEB-09 2G31 1 VERSN
REVDAT 1 22-AUG-06 2G31 0
JRNL AUTH M.F.LI,J.X.LIU,J.X.SONG
JRNL TITL NOGO GOES IN THE PURE WATER: SOLUTION STRUCTURE OF NOGO-60
JRNL TITL 2 AND DESIGN OF THE STRUCTURED AND BUFFER-SOLUBLE NOGO-54 FOR
JRNL TITL 3 ENHANCING CNS REGENERATION
JRNL REF PROTEIN SCI. V. 15 1835 2006
JRNL REFN ISSN 0961-8368
JRNL PMID 16877707
JRNL DOI 10.1110/PS.062306906
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : DYANA CYANA 1.0.6
REMARK 3 AUTHORS : PETER GUNTERT
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 2G31 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-FEB-06.
REMARK 100 THE DEPOSITION ID IS D_1000036625.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 278
REMARK 210 PH : 4.0
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 90% H2O, 10% D2O
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 2D
REMARK 210 NOESY; 2D TOCSY
REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ
REMARK 210 SPECTROMETER MODEL : INOVA
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NULL
REMARK 210 METHOD USED : DISTANCE GEOMETRY
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 200
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O ASN A 46 H LYS A 50 1.57
REMARK 500 O ARG A 20 H GLU A 24 1.60
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 LYS A 4 58.18 -98.77
REMARK 500 1 ALA A 21 -70.29 -46.65
REMARK 500 1 HIS A 44 38.31 37.08
REMARK 500 1 LEU A 55 12.93 87.43
REMARK 500 1 PHE A 56 -43.85 -153.13
REMARK 500 1 VAL A 58 73.56 39.76
REMARK 500 1 ASP A 59 -55.08 78.94
REMARK 500 2 ILE A 2 46.19 -87.66
REMARK 500 2 LYS A 4 -141.36 -100.27
REMARK 500 2 ALA A 21 -70.25 -43.24
REMARK 500 2 HIS A 44 47.46 160.25
REMARK 500 2 GLU A 51 -32.43 -38.37
REMARK 500 2 LEU A 52 -64.53 -94.92
REMARK 500 2 LEU A 55 25.17 83.31
REMARK 500 2 PHE A 56 -44.52 -142.93
REMARK 500 2 VAL A 58 89.92 40.62
REMARK 500 2 ASP A 59 99.29 53.55
REMARK 500 3 LYS A 4 -141.26 -100.18
REMARK 500 3 VAL A 6 -53.48 -152.74
REMARK 500 3 LEU A 42 46.76 -85.10
REMARK 500 3 HIS A 44 35.39 35.57
REMARK 500 3 GLU A 51 -31.21 -39.06
REMARK 500 3 LEU A 52 -64.39 -94.98
REMARK 500 3 LEU A 55 23.56 88.34
REMARK 500 3 PHE A 56 -44.64 -142.71
REMARK 500 3 VAL A 58 63.01 39.01
REMARK 500 3 ASP A 59 -59.23 68.26
REMARK 500 4 LYS A 4 62.87 -100.37
REMARK 500 4 VAL A 6 -78.16 -123.62
REMARK 500 4 ALA A 21 -70.24 -56.23
REMARK 500 4 HIS A 44 45.12 160.91
REMARK 500 4 ARG A 53 -70.00 -55.93
REMARK 500 4 LEU A 55 23.65 88.59
REMARK 500 4 PHE A 56 -46.63 -169.19
REMARK 500 4 VAL A 58 89.98 41.81
REMARK 500 4 ASP A 59 95.11 48.61
REMARK 500 5 ILE A 2 56.94 -107.69
REMARK 500 5 TYR A 3 -43.11 -132.68
REMARK 500 5 LYS A 4 -141.09 -100.15
REMARK 500 5 PRO A 18 -72.39 -75.02
REMARK 500 5 HIS A 44 34.79 37.46
REMARK 500 5 ARG A 53 -69.19 -90.97
REMARK 500 5 LEU A 55 39.42 83.72
REMARK 500 5 PHE A 56 -43.35 -155.34
REMARK 500 5 VAL A 58 89.25 39.45
REMARK 500 5 ASP A 59 106.11 68.03
REMARK 500 6 VAL A 6 -49.32 -149.09
REMARK 500 6 HIS A 44 34.09 36.36
REMARK 500 6 GLU A 51 -29.26 -39.12
REMARK 500 6 LEU A 52 -65.01 -94.83
REMARK 500
REMARK 500 THIS ENTRY HAS 186 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
DBREF 2G31 A 1 60 UNP Q9NQC3 RTN4_HUMAN 1055 1114
SEQRES 1 A 60 ARG ILE TYR LYS GLY VAL ILE GLN ALA ILE GLN LYS SER
SEQRES 2 A 60 ASP GLU GLY HIS PRO PHE ARG ALA TYR LEU GLU SER GLU
SEQRES 3 A 60 VAL ALA ILE SER GLU GLU LEU VAL GLN LYS TYR SER ASN
SEQRES 4 A 60 SER ALA LEU GLY HIS VAL ASN CYS THR ILE LYS GLU LEU
SEQRES 5 A 60 ARG ARG LEU PHE LEU VAL ASP ASP
HELIX 1 1 GLN A 8 HIS A 17 1 10
HELIX 2 2 PHE A 19 ALA A 41 1 23
HELIX 3 3 LEU A 42 HIS A 44 5 3
HELIX 4 4 VAL A 45 ARG A 54 1 10
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 9 2 Bytes