Header list of 2g0u.pdb file
Complete list - r 9 2 Bytes
HEADER UNKNOWN FUNCTION 13-FEB-06 2G0U
TITLE SOLUTION STRUCTURE OF MONOMERIC BSAL, THE TYPE III SECRETION NEEDLE
TITLE 2 PROTEIN OF BURKHOLDERIA PSEUDOMALLEI
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: TYPE III SECRETION SYSTEM NEEDLE PROTEIN;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: BSALDELTA5;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI;
SOURCE 3 ORGANISM_TAXID: 28450;
SOURCE 4 STRAIN: E264;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS HELIX-TURN-HELIX, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR L.ZHANG,Y.WANG,W.L.PICKING,W.D.PICKING,R.N.DE GUZMAN
REVDAT 3 09-MAR-22 2G0U 1 REMARK SEQADV
REVDAT 2 24-FEB-09 2G0U 1 VERSN
REVDAT 1 23-MAY-06 2G0U 0
JRNL AUTH L.ZHANG,Y.WANG,W.L.PICKING,W.D.PICKING,R.N.DE GUZMAN
JRNL TITL SOLUTION STRUCTURE OF MONOMERIC BSAL, THE TYPE III SECRETION
JRNL TITL 2 NEEDLE PROTEIN OF BURKHOLDERIA PSEUDOMALLEI.
JRNL REF J.MOL.BIOL. V. 359 322 2006
JRNL REFN ISSN 0022-2836
JRNL PMID 16631790
JRNL DOI 10.1016/J.JMB.2006.03.028
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : NMRPIPE 2005, CYANA, AMBER 7
REMARK 3 AUTHORS : DELAGLIO, F., GRZESIEK, S., VUISTER, G.W., ZHU,
REMARK 3 G., PFEIFER, J., AND BAX, A. (NMRPIPE), GUNTERT,
REMARK 3 P. (CYANA), CASE, D.A., PEARLMAN, D.A., CALDWELL,
REMARK 3 J.W., CHEATHAM III, T.E., WANG, J., ROSS, W.S.,
REMARK 3 SIMMERLING, C.L., DARDEN, T.A., MERZ, K.M.,
REMARK 3 STANTON, R.V., CHENG, A.L., VINCENT, J.J., CROWLEY,
REMARK 3 M., TSUI, V., GOHLKE, H., RADMER, R.J., DUAN, Y.,
REMARK 3 PITERA, J., MASSOVA, I., SEIBEL, G.L., SINGH, U.C.,
REMARK 3 WEINER, P.K., AND KOLLMAN, P.A. (AMBER)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 2G0U COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-FEB-06.
REMARK 100 THE DEPOSITION ID IS D_1000036546.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 7.0
REMARK 210 IONIC STRENGTH : 20MM
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : NULL
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C
REMARK 210 -SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ
REMARK 210 SPECTROMETER MODEL : AVANCE; INOVA
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRVIEW 5.0.2
REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS SIMULATED
REMARK 210 ANNEALING MOLECULAR DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 200
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST
REMARK 210 RESTRAINT VIOLATIONS,STRUCTURES
REMARK 210 WITH THE LOWEST ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 3 ARG A 23 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES
REMARK 500 4 ARG A 23 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES
REMARK 500 10 ARG A 23 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES
REMARK 500 11 ARG A 23 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES
REMARK 500 17 ARG A 23 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES
REMARK 500 18 ARG A 23 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 LEU A 8 14.22 -144.85
REMARK 500 1 ALA A 10 28.75 -141.43
REMARK 500 1 GLU A 13 -40.90 -159.65
REMARK 500 1 ASP A 26 18.16 -144.09
REMARK 500 1 ASN A 46 86.80 -152.71
REMARK 500 1 HIS A 90 -50.10 -136.24
REMARK 500 2 TYR A 12 13.44 -61.15
REMARK 500 2 THR A 19 -164.42 -165.46
REMARK 500 2 ALA A 24 -44.02 -141.21
REMARK 500 2 LEU A 85 37.76 -76.72
REMARK 500 2 HIS A 88 23.75 -68.44
REMARK 500 3 PRO A 5 157.18 -48.59
REMARK 500 3 ASP A 26 2.93 -67.98
REMARK 500 3 ASN A 46 89.89 -151.23
REMARK 500 3 SER A 83 -8.71 -140.78
REMARK 500 5 LEU A 9 14.35 -66.52
REMARK 500 5 ASP A 26 -43.61 -139.73
REMARK 500 5 ASN A 46 86.49 -151.24
REMARK 500 6 TRP A 14 28.55 -66.09
REMARK 500 6 VAL A 29 -47.33 -146.62
REMARK 500 6 ILE A 84 -11.91 -145.18
REMARK 500 7 TRP A 14 28.55 -66.09
REMARK 500 7 VAL A 29 -47.33 -146.62
REMARK 500 7 ILE A 84 -11.91 -145.18
REMARK 500 8 ALA A 10 -6.28 -154.25
REMARK 500 8 SER A 15 109.92 -57.11
REMARK 500 8 THR A 19 29.52 -148.68
REMARK 500 8 ILE A 21 71.01 0.01
REMARK 500 9 LEU A 9 -2.39 -144.56
REMARK 500 9 ARG A 23 -20.59 -145.78
REMARK 500 9 SER A 76 19.55 -140.74
REMARK 500 9 SER A 83 -1.94 -142.50
REMARK 500 9 HIS A 91 -3.86 -147.58
REMARK 500 10 GLU A 13 -41.59 -154.00
REMARK 500 10 ASN A 46 89.89 -151.25
REMARK 500 11 HIS A 87 -49.39 -150.81
REMARK 500 11 HIS A 91 10.74 -150.19
REMARK 500 12 PRO A 7 108.37 -52.08
REMARK 500 12 TYR A 12 -7.93 -55.18
REMARK 500 12 TRP A 14 -24.63 -151.34
REMARK 500 12 ILE A 21 118.50 -25.73
REMARK 500 13 THR A 6 151.93 66.76
REMARK 500 13 ASP A 11 -44.77 -159.08
REMARK 500 13 SER A 83 31.09 -152.12
REMARK 500 13 HIS A 89 39.51 -73.64
REMARK 500 14 GLU A 13 -4.36 -142.51
REMARK 500 14 ASN A 46 87.77 -151.77
REMARK 500 14 ILE A 84 42.22 -77.72
REMARK 500 15 PRO A 7 -4.29 -58.74
REMARK 500 15 ALA A 10 22.92 -144.45
REMARK 500
REMARK 500 THIS ENTRY HAS 63 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 1 TYR A 56 0.10 SIDE CHAIN
REMARK 500 2 TYR A 56 0.09 SIDE CHAIN
REMARK 500 3 TYR A 56 0.10 SIDE CHAIN
REMARK 500 4 TYR A 56 0.08 SIDE CHAIN
REMARK 500 4 TYR A 63 0.06 SIDE CHAIN
REMARK 500 5 TYR A 56 0.09 SIDE CHAIN
REMARK 500 6 TYR A 56 0.10 SIDE CHAIN
REMARK 500 7 TYR A 56 0.10 SIDE CHAIN
REMARK 500 8 TYR A 56 0.07 SIDE CHAIN
REMARK 500 9 TYR A 56 0.08 SIDE CHAIN
REMARK 500 10 TYR A 56 0.08 SIDE CHAIN
REMARK 500 11 TYR A 56 0.09 SIDE CHAIN
REMARK 500 12 TYR A 56 0.08 SIDE CHAIN
REMARK 500 13 TYR A 56 0.07 SIDE CHAIN
REMARK 500 14 TYR A 56 0.08 SIDE CHAIN
REMARK 500 15 TYR A 56 0.08 SIDE CHAIN
REMARK 500 16 TYR A 56 0.10 SIDE CHAIN
REMARK 500 17 TYR A 56 0.08 SIDE CHAIN
REMARK 500 18 TYR A 56 0.08 SIDE CHAIN
REMARK 500 19 TYR A 56 0.09 SIDE CHAIN
REMARK 500 20 TYR A 56 0.10 SIDE CHAIN
REMARK 500
REMARK 500 REMARK: NULL
DBREF 2G0U A 1 84 UNP Q63K18 Q63K18_BURPS 1 84
SEQADV 2G0U ALA A 10 UNP Q63K18 THR 10 CONFLICT
SEQADV 2G0U ASP A 27 UNP Q63K18 THR 27 CONFLICT
SEQADV 2G0U LYS A 34 UNP Q63K18 GLN 34 CONFLICT
SEQADV 2G0U LEU A 85 UNP Q63K18 EXPRESSION TAG
SEQADV 2G0U GLU A 86 UNP Q63K18 EXPRESSION TAG
SEQADV 2G0U HIS A 87 UNP Q63K18 EXPRESSION TAG
SEQADV 2G0U HIS A 88 UNP Q63K18 EXPRESSION TAG
SEQADV 2G0U HIS A 89 UNP Q63K18 EXPRESSION TAG
SEQADV 2G0U HIS A 90 UNP Q63K18 EXPRESSION TAG
SEQADV 2G0U HIS A 91 UNP Q63K18 EXPRESSION TAG
SEQADV 2G0U HIS A 92 UNP Q63K18 EXPRESSION TAG
SEQRES 1 A 92 MET SER ASN PRO PRO THR PRO LEU LEU ALA ASP TYR GLU
SEQRES 2 A 92 TRP SER GLY TYR LEU THR GLY ILE GLY ARG ALA PHE ASP
SEQRES 3 A 92 ASP GLY VAL LYS ASP LEU ASN LYS GLN LEU GLN ASP ALA
SEQRES 4 A 92 GLN ALA ASN LEU THR LYS ASN PRO SER ASP PRO THR ALA
SEQRES 5 A 92 LEU ALA ASN TYR GLN MET ILE MET SER GLU TYR ASN LEU
SEQRES 6 A 92 TYR ARG ASN ALA GLN SER SER ALA VAL LYS SER MET LYS
SEQRES 7 A 92 ASP ILE ASP SER SER ILE LEU GLU HIS HIS HIS HIS HIS
SEQRES 8 A 92 HIS
HELIX 1 1 SER A 15 ARG A 23 1 9
HELIX 2 2 ALA A 24 ASP A 26 5 3
HELIX 3 3 VAL A 29 ASN A 46 1 18
HELIX 4 4 ASP A 49 SER A 76 1 28
HELIX 5 5 SER A 76 ASP A 81 1 6
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 9 2 Bytes