Header list of 2czp.pdb file
Complete list - 9 20 Bytes
HEADER TOXIN 14-JUL-05 2CZP
TITLE STRUCTURAL ANALYSIS OF MEMBRANE-BOUND MASTOPARAN-X BY SOLID-STATE NMR
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: MASTOPARAN X;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: MP-X;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: VESPA SIMILLIMA XANTHOPTERA;
SOURCE 3 ORGANISM_COMMON: JAPANESE YELLOW HORNET;
SOURCE 4 ORGANISM_TAXID: 7448;
SOURCE 5 STRAIN: XANTHOPTERA;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 STAR (DE3);
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PUBK19
KEYWDS MASTOPARAN X, MP-X, MEMBRANE BOUND, MAST CELL DEGRANULATION, VENOM,
KEYWDS 2 AMIDATION, TOXIN
EXPDTA SOLID-STATE NMR
NUMMDL 10
AUTHOR Y.TODOKORO,T.FUJIWARA,I.YUMEN,K.FUKUSHIMA,S.-W.KANG,J.-S.PARK,
AUTHOR 2 T.KOHNO,K.WAKAMATSU,H.AKUTSU
REVDAT 4 09-MAR-22 2CZP 1 REMARK LINK
REVDAT 3 24-FEB-09 2CZP 1 VERSN
REVDAT 2 08-AUG-06 2CZP 1 JRNL
REVDAT 1 04-JUL-06 2CZP 0
JRNL AUTH Y.TODOKORO,I.YUMEN,K.FUKUSHIMA,S.-W.KANG,J.-S.PARK,T.KOHNO,
JRNL AUTH 2 K.WAKAMATSU,H.AKUTSU,T.FUJIWARA
JRNL TITL STRUCTURE OF TIGHTLY MEMBRANE-BOUND MASTOPARAN-X, A
JRNL TITL 2 G-PROTEIN-ACTIVATING PEPTIDE, DETERMINED BY SOLID-STATE NMR.
JRNL REF BIOPHYS.J. V. 91 1368 2006
JRNL REFN ISSN 0006-3495
JRNL PMID 16714348
JRNL DOI 10.1529/BIOPHYSJ.106.082735
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : FELIX 2000, CYANA 1.0.6
REMARK 3 AUTHORS : ACCELRYS INC. (FELIX), GUENTERT (CYANA)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL OF
REMARK 3 31 RESTRAINTS, 5 DISTANCE RESTRAINTS DERIVED BY RR AND REDOR
REMARK 3 EXPERIMENTS AND 26 DIHEDRAL ANGLE RESTRAINTS PREDICTED BY TALOS.
REMARK 4
REMARK 4 2CZP COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-JUL-05.
REMARK 100 THE DEPOSITION ID IS D_1000024806.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 253; 283
REMARK 210 PH : 7.4; 7.4
REMARK 210 IONIC STRENGTH : NULL; NULL
REMARK 210 PRESSURE : AMBIENT; AMBIENT
REMARK 210 SAMPLE CONTENTS : 2MG OR 5MG UNIFORMLY 13C, 15N
REMARK 210 LABELED MP-X BOUND TO MEMBRANE:
REMARK 210 MOLAR RATIO MP-X:MEMBRANE=1:20;
REMARK 210 2MG SELECTIVELY 13C LABELED MP-X
REMARK 210 BOUND TO MEMBRANE: MOLAR RATIO
REMARK 210 MP-X:MEMBRANE=1:20; 2MG
REMARK 210 SELECTIVELY 13C, 15N LABELED MP-
REMARK 210 X BOUND TO MEMBRANE: MOLAR RATIO
REMARK 210 MP-X:MEMBRANE=1:20
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_N-CA-CO; 3D_NI-COI+1-CAI+1;
REMARK 210 2D_RFDR; 2D_SPCZ5; 2D_(CACB)I+1-
REMARK 210 (COCA)I; 2D_NI-(COCA)I+1; 2D_N-
REMARK 210 CA; 2D_NI-(COCACB)I+1; RR; REDOR
REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ
REMARK 210 SPECTROMETER MODEL : CMX
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : CYANA 1.0.6, TALOS
REMARK 210 2003.027.13.05
REMARK 210 METHOD USED : SIMULATED ANNEALING
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST
REMARK 210 ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE
REMARK 210 1H/13C/15N AND DOUBLE-RESONANCE 1H/13C PROBES WITH 4MM AND 3.2MM
REMARK 210 SPINNER MODULES.
REMARK 217
REMARK 217 SOLID STATE NMR STUDY
REMARK 217 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLID
REMARK 217 STATE NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 217 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 217 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O LYS A 11 HN1 NH2 A 15 1.53
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH2 A 15
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1A13 RELATED DB: PDB
REMARK 900 G PROTEIN-BOUND CONFORMATION OF MASTOPARAN-X
REMARK 900 RELATED ID: 1D7N RELATED DB: PDB
REMARK 900 SOLUTION STRUCTURE ANALYSIS OF THE MASTOPARAN WITH DETERGENTS
REMARK 900 RELATED ID: 6214 RELATED DB: BMRB
REMARK 900 SIGNAL ASSIGNMENTS AND CHEMICAL-SHIFT STRUCTURAL ANALYSIS OF
REMARK 900 UNIFORMLY 13C, 15N-LABELED PEPTIDE, MASTOPARAN-X, BY
REMARK 900 MULTIDIMENSIONAL SOLID-STATE NMR UNDER MAGIC-ANGLE SPINNING
DBREF 2CZP A 1 14 UNP P01515 MAST_VESXA 1 14
SEQRES 1 A 15 ILE ASN TRP LYS GLY ILE ALA ALA MET ALA LYS LYS LEU
SEQRES 2 A 15 LEU NH2
HET NH2 A 15 3
HETNAM NH2 AMINO GROUP
FORMUL 1 NH2 H2 N
HELIX 1 1 ASN A 2 LEU A 14 1 13
LINK C LEU A 14 N NH2 A 15 1555 1555 1.33
SITE 1 AC1 2 LYS A 11 LEU A 14
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - 9 20 Bytes