Header list of 2cuj.pdb file
Complete list - r 9 2 Bytes
HEADER TRANSCRIPTION 26-MAY-05 2CUJ
TITLE SOLUTION STRUCTURE OF SWIRM DOMAIN OF MOUSE TRANSCRIPTIONAL ADAPTOR 2-
TITLE 2 LIKE
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: TRANSCRIPTIONAL ADAPTOR 2-LIKE;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: SWIRM DOMAIN;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS;
SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE;
SOURCE 4 ORGANISM_TAXID: 10090;
SOURCE 5 GENE: TADA2L;
SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P041018-15;
SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS TRANSCRIPTIONAL REGULATION, NUCLEAR PROTEIN, ADA2, STRUCTURAL
KEYWDS 2 GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND
KEYWDS 3 FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS
KEYWDS 4 INITIATIVE, RSGI, TRANSCRIPTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.YONEYAMA,T.UMEHARA,M.SATO,N.TOCHIO,S.KOSHIBA,M.INOUE,A.TANAKA,
AUTHOR 2 T.KIGAWA,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE
AUTHOR 3 (RSGI)
REVDAT 5 09-MAR-22 2CUJ 1 REMARK SEQADV
REVDAT 4 24-FEB-09 2CUJ 1 VERSN
REVDAT 3 15-MAY-07 2CUJ 3 ATOM
REVDAT 2 15-MAY-07 2CUJ 1 JRNL
REVDAT 1 26-NOV-05 2CUJ 0
JRNL AUTH M.YONEYAMA,N.TOCHIO,T.UMEHARA,S.KOSHIBA,M.INOUE,T.YABUKI,
JRNL AUTH 2 M.AOKI,E.SEKI,T.MATSUDA,S.WATANABE,Y.TOMO,Y.NISHIMURA,
JRNL AUTH 3 T.HARADA,T.TERADA,M.SHIROUZU,Y.HAYASHIZAKI,O.OHARA,A.TANAKA,
JRNL AUTH 4 T.KIGAWA,S.YOKOYAMA
JRNL TITL STRUCTURAL AND FUNCTIONAL DIFFERENCES OF SWIRM DOMAIN
JRNL TITL 2 SUBTYPES
JRNL REF J.MOL.BIOL. V. 369 222 2007
JRNL REFN ISSN 0022-2836
JRNL PMID 17428495
JRNL DOI 10.1016/J.JMB.2007.03.027
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : XWINNMR 2.6, CYANA 2.0.17
REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 2CUJ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-MAY-05.
REMARK 100 THE DEPOSITION ID IS D_1000024634.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 296
REMARK 210 PH : 7.0
REMARK 210 IONIC STRENGTH : 120
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 1.36MM SWIRM DOMAIN U-15N, 13C;
REMARK 210 20MM D-TRIS-HCL2 (PH7.0), 100MM
REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; 10%
REMARK 210 D2O
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C
REMARK 210 -SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ
REMARK 210 SPECTROMETER MODEL : AVANCE
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4,
REMARK 210 KUJIRA 0.9295, CYANA 2.0.17
REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH
REMARK 210 THE LOWEST ENERGY, STRUCTURES
REMARK 210 WITH THE LEAST RESTRAINT
REMARK 210 VIOLATIONS
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 SER A 2 41.81 39.47
REMARK 500 1 THR A 33 103.67 -40.57
REMARK 500 1 LYS A 63 -72.48 -49.04
REMARK 500 1 GLN A 73 -67.34 -93.64
REMARK 500 1 ARG A 93 -38.36 -36.03
REMARK 500 2 VAL A 16 140.08 -171.54
REMARK 500 2 SER A 20 121.20 -173.29
REMARK 500 2 ASN A 21 120.37 -173.05
REMARK 500 2 PRO A 29 -174.42 -69.77
REMARK 500 2 THR A 33 107.15 -41.09
REMARK 500 2 LYS A 46 -34.66 -39.10
REMARK 500 3 SER A 5 43.02 -109.16
REMARK 500 3 SER A 22 106.07 -44.04
REMARK 500 3 ASN A 31 96.79 -67.06
REMARK 500 3 THR A 33 102.44 -39.10
REMARK 500 3 ASP A 88 122.04 -39.92
REMARK 500 4 ASP A 9 -63.23 -93.25
REMARK 500 4 SER A 13 142.52 -172.37
REMARK 500 4 ARG A 25 137.36 -173.92
REMARK 500 4 THR A 33 106.05 -34.03
REMARK 500 4 GLN A 73 -61.71 -127.51
REMARK 500 4 ALA A 79 -29.12 -38.41
REMARK 500 4 ASP A 88 112.62 -35.52
REMARK 500 5 LEU A 12 124.69 -175.20
REMARK 500 5 SER A 13 144.22 -36.60
REMARK 500 5 PRO A 14 94.07 -69.81
REMARK 500 5 ASN A 21 -57.79 -120.01
REMARK 500 5 THR A 33 105.27 -37.02
REMARK 500 5 GLN A 50 -63.98 -90.99
REMARK 500 5 ASN A 90 -18.89 -48.63
REMARK 500 6 ASP A 9 105.80 -162.83
REMARK 500 6 PRO A 14 95.50 -69.75
REMARK 500 6 THR A 33 104.57 -36.22
REMARK 500 7 PRO A 14 96.21 -69.74
REMARK 500 7 VAL A 16 134.39 -174.55
REMARK 500 7 ASN A 31 94.35 -62.08
REMARK 500 7 THR A 33 112.23 -35.72
REMARK 500 7 LYS A 46 -39.89 -38.29
REMARK 500 7 ARG A 93 -37.60 -38.07
REMARK 500 8 SER A 2 108.45 -169.08
REMARK 500 8 PRO A 14 96.96 -69.76
REMARK 500 8 VAL A 16 170.29 -46.08
REMARK 500 8 SER A 22 144.03 -173.28
REMARK 500 8 ARG A 25 134.54 -171.25
REMARK 500 8 SER A 26 130.64 -37.82
REMARK 500 8 ASN A 31 86.34 -60.91
REMARK 500 8 THR A 33 105.31 -36.06
REMARK 500 8 ASP A 88 125.00 -38.18
REMARK 500 9 THR A 33 103.95 -38.38
REMARK 500 9 GLN A 73 -60.21 -126.02
REMARK 500
REMARK 500 THIS ENTRY HAS 114 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: MMT008012850.1 RELATED DB: TARGETDB
DBREF 2CUJ A 8 108 UNP Q8BNK0 Q8BNK0_MOUSE 343 443
SEQADV 2CUJ GLY A 1 UNP Q8BNK0 CLONING ARTIFACT
SEQADV 2CUJ SER A 2 UNP Q8BNK0 CLONING ARTIFACT
SEQADV 2CUJ SER A 3 UNP Q8BNK0 CLONING ARTIFACT
SEQADV 2CUJ GLY A 4 UNP Q8BNK0 CLONING ARTIFACT
SEQADV 2CUJ SER A 5 UNP Q8BNK0 CLONING ARTIFACT
SEQADV 2CUJ SER A 6 UNP Q8BNK0 CLONING ARTIFACT
SEQADV 2CUJ GLY A 7 UNP Q8BNK0 CLONING ARTIFACT
SEQRES 1 A 108 GLY SER SER GLY SER SER GLY ILE ASP SER GLY LEU SER
SEQRES 2 A 108 PRO SER VAL LEU MET ALA SER ASN SER GLY ARG ARG SER
SEQRES 3 A 108 ALA PRO PRO LEU ASN LEU THR GLY LEU PRO GLY THR GLU
SEQRES 4 A 108 LYS LEU ASN GLU LYS GLU LYS GLU LEU CYS GLN VAL VAL
SEQRES 5 A 108 ARG LEU VAL PRO GLY ALA TYR LEU GLU TYR LYS SER ALA
SEQRES 6 A 108 LEU LEU ASN GLU CYS HIS LYS GLN GLY GLY LEU ARG LEU
SEQRES 7 A 108 ALA GLN ALA ARG ALA LEU ILE LYS ILE ASP VAL ASN LYS
SEQRES 8 A 108 THR ARG LYS ILE TYR ASP PHE LEU ILE ARG GLU GLY TYR
SEQRES 9 A 108 ILE THR LYS ALA
HELIX 1 1 ASN A 42 VAL A 52 1 11
HELIX 2 2 VAL A 55 GLN A 73 1 19
HELIX 3 3 ARG A 77 LYS A 86 1 10
HELIX 4 4 ASP A 88 ARG A 101 1 14
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 9 2 Bytes