Header list of 2cu7.pdb file
Complete list - r 9 2 Bytes
HEADER TRANSCRIPTION 25-MAY-05 2CU7
TITLE SOLUTION STRUCTURE OF THE SANT DOMAIN OF HUMAN KIAA1915 PROTEIN
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: KIAA1915 PROTEIN;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: SANT DOMAIN;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: KIAA1915;
SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P041018-13;
SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS NUCLEAR PROTEIN, SANT DOMAIN, DNA BINDING, REGULATION OF
KEYWDS 2 TRANSCRIPTION, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON
KEYWDS 3 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL
KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI, TRANSCRIPTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.YONEYAMA,T.UMEHARA,K.SAITO,N.TOCHIO,S.KOSHIBA,M.INOUE,A.TANAKA,
AUTHOR 2 T.KIGAWA,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE
AUTHOR 3 (RSGI)
REVDAT 6 09-MAR-22 2CU7 1 REMARK SEQADV
REVDAT 5 24-FEB-09 2CU7 1 VERSN
REVDAT 4 15-MAY-07 2CU7 3 ATOM
REVDAT 3 15-MAY-07 2CU7 1 JRNL
REVDAT 2 17-JAN-06 2CU7 1 JRNL TITLE
REVDAT 1 25-NOV-05 2CU7 0
JRNL AUTH M.YONEYAMA,N.TOCHIO,T.UMEHARA,S.KOSHIBA,M.INOUE,T.YABUKI,
JRNL AUTH 2 M.AOKI,E.SEKI,T.MATSUDA,S.WATANABE,Y.TOMO,Y.NISHIMURA,
JRNL AUTH 3 T.HARADA,T.TERADA,M.SHIROUZU,Y.HAYASHIZAKI,O.OHARA,A.TANAKA,
JRNL AUTH 4 T.KIGAWA,S.YOKOYAMA
JRNL TITL STRUCTURAL AND FUNCTIONAL DIFFERENCES OF SWIRM DOMAIN
JRNL TITL 2 SUBTYPES
JRNL REF J.MOL.BIOL. V. 369 222 2007
JRNL REFN ISSN 0022-2836
JRNL PMID 17428495
JRNL DOI 10.1016/J.JMB.2007.03.027
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : XWINNMR 2.6, CYANA 2.0.17
REMARK 3 AUTHORS : BRUKER (XWINNMR), GUENTERT, P. (CYANA)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 2CU7 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-MAY-05.
REMARK 100 THE DEPOSITION ID IS D_1000024623.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 4.5
REMARK 210 IONIC STRENGTH : 120
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 0.83MM SANT DOMAIN U-15N, 13C;
REMARK 210 20MM ACETATE BUFFER NA (PH4.5);
REMARK 210 100MM NACL; 1MM D-DTT; 0.02%
REMARK 210 NAN3; 10% D2O
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C
REMARK 210 -SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ
REMARK 210 SPECTROMETER MODEL : AVANCE
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4,
REMARK 210 KUJIRA 0.9295, CYANA 2.0.17
REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH
REMARK 210 THE LOWEST ENERGY, STRUCTURES
REMARK 210 WITH THE LEAST RESTRAINT
REMARK 210 VIOLATIONS
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 SER A 6 46.73 -80.34
REMARK 500 1 ARG A 29 31.08 -86.50
REMARK 500 1 LEU A 44 -70.46 -61.55
REMARK 500 1 CYS A 60 129.84 -38.71
REMARK 500 1 PRO A 67 2.88 -69.77
REMARK 500 2 ARG A 29 32.35 -85.03
REMARK 500 2 ALA A 50 -34.83 -38.26
REMARK 500 2 LYS A 57 173.46 -46.49
REMARK 500 2 VAL A 58 27.71 39.77
REMARK 500 2 LYS A 59 162.79 -41.21
REMARK 500 2 LEU A 62 42.61 -83.10
REMARK 500 2 ASN A 68 40.71 36.11
REMARK 500 2 THR A 71 99.19 -54.73
REMARK 500 3 TYR A 8 93.59 -67.30
REMARK 500 3 GLU A 65 134.47 -175.02
REMARK 500 4 SER A 2 95.75 -53.22
REMARK 500 4 SER A 5 42.45 -89.48
REMARK 500 4 VAL A 10 49.58 -93.72
REMARK 500 4 ARG A 29 31.38 -90.04
REMARK 500 4 LEU A 44 -70.64 -60.06
REMARK 500 4 PHE A 54 -29.84 -36.58
REMARK 500 4 LYS A 57 -175.03 -51.63
REMARK 500 4 VAL A 58 109.57 -33.97
REMARK 500 4 LYS A 59 138.07 -34.91
REMARK 500 4 PRO A 67 -178.76 -69.78
REMARK 500 5 SER A 6 42.79 -101.29
REMARK 500 5 ALA A 50 -39.38 -36.79
REMARK 500 5 LYS A 64 166.97 -46.06
REMARK 500 6 VAL A 10 54.18 -93.54
REMARK 500 6 ALA A 50 -36.78 -34.02
REMARK 500 6 LYS A 57 -177.88 -50.43
REMARK 500 6 VAL A 58 28.17 37.40
REMARK 500 6 LYS A 59 173.51 -50.04
REMARK 500 6 CYS A 60 90.22 -64.09
REMARK 500 7 SER A 6 163.88 -45.53
REMARK 500 7 LEU A 62 76.44 -103.65
REMARK 500 7 THR A 71 144.97 -172.80
REMARK 500 8 PHE A 54 -27.38 -38.29
REMARK 500 8 LYS A 57 160.39 -40.07
REMARK 500 9 SER A 5 36.25 71.27
REMARK 500 9 VAL A 43 -38.69 -38.70
REMARK 500 9 CYS A 60 48.54 39.17
REMARK 500 9 LEU A 62 32.83 -85.35
REMARK 500 9 GLN A 69 144.92 -38.57
REMARK 500 10 SER A 6 42.15 -95.55
REMARK 500 10 SER A 35 -37.62 -37.35
REMARK 500 10 ALA A 50 -39.75 -39.85
REMARK 500 10 CYS A 60 42.50 34.97
REMARK 500 10 LYS A 64 152.27 -37.85
REMARK 500 11 VAL A 10 51.01 -97.87
REMARK 500
REMARK 500 THIS ENTRY HAS 99 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: HSK002101882.1 RELATED DB: TARGETDB
DBREF 2CU7 A 8 72 UNP Q5VVJ2 Q5VVJ2_HUMAN 33 97
SEQADV 2CU7 GLY A 1 UNP Q5VVJ2 CLONING ARTIFACT
SEQADV 2CU7 SER A 2 UNP Q5VVJ2 CLONING ARTIFACT
SEQADV 2CU7 SER A 3 UNP Q5VVJ2 CLONING ARTIFACT
SEQADV 2CU7 GLY A 4 UNP Q5VVJ2 CLONING ARTIFACT
SEQADV 2CU7 SER A 5 UNP Q5VVJ2 CLONING ARTIFACT
SEQADV 2CU7 SER A 6 UNP Q5VVJ2 CLONING ARTIFACT
SEQADV 2CU7 GLY A 7 UNP Q5VVJ2 CLONING ARTIFACT
SEQRES 1 A 72 GLY SER SER GLY SER SER GLY TYR SER VAL LYS TRP THR
SEQRES 2 A 72 ILE GLU GLU LYS GLU LEU PHE GLU GLN GLY LEU ALA LYS
SEQRES 3 A 72 PHE GLY ARG ARG TRP THR LYS ILE SER LYS LEU ILE GLY
SEQRES 4 A 72 SER ARG THR VAL LEU GLN VAL LYS SER TYR ALA ARG GLN
SEQRES 5 A 72 TYR PHE LYS ASN LYS VAL LYS CYS GLY LEU ASP LYS GLU
SEQRES 6 A 72 THR PRO ASN GLN LYS THR GLY
HELIX 1 1 THR A 13 PHE A 27 1 15
HELIX 2 2 ARG A 30 GLY A 39 1 10
HELIX 3 3 THR A 42 VAL A 58 1 17
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 9 2 Bytes