Header list of 2cs4.pdb file
Complete list - r 9 2 Bytes
HEADER STRUCTURAL GENOMICS, SIGNALING PROTEIN 20-MAY-05 2CS4
TITLE SOLUTION STRUCTURE OF N-TERMINAL DOMAIN OF CHROMOSOME 12 OPEN READING
TITLE 2 FRAME 2
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: PROTEIN C12ORF2;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: RA DOMAIN;
COMPND 5 SYNONYM: CARCINOMA ASSOCIATED PROTEIN HOJ-1;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: C12ORF2;
SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P041129-07;
SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS GTP BINDING, UBIQUITIN FOLD, STRUCTURAL GENOMICS, NPPSFA, NATIONAL
KEYWDS 2 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN
KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, SIGNALING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS
AUTHOR 2 INITIATIVE (RSGI)
REVDAT 3 09-MAR-22 2CS4 1 REMARK SEQADV
REVDAT 2 24-FEB-09 2CS4 1 VERSN
REVDAT 1 20-NOV-05 2CS4 0
JRNL AUTH T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA
JRNL TITL SOLUTION STRUCTURE OF N-TERMINAL DOMAIN OF CHROMOSOME 12
JRNL TITL 2 OPEN READING FRAME 2
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : VNMR 6.1C, CYANA 2.0.17
REMARK 3 AUTHORS : VARIAN (VNMR), GUNTERT, P. (CYANA)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 2CS4 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-MAY-05.
REMARK 100 THE DEPOSITION ID IS D_1000024561.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 293
REMARK 210 PH : 7.0
REMARK 210 IONIC STRENGTH : 120MM
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 0.99MM RA DOMAIN U-13C, 15N;
REMARK 210 20MM TRISHCL, 100MM NACL, 1MM
REMARK 210 DTT, 0.02% NAN3
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C
REMARK 210 -SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ
REMARK 210 SPECTROMETER MODEL : INOVA
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5,
REMARK 210 KUJIRA 0.901, CYANA 2.0.17
REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH
REMARK 210 THE LOWEST ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 ARG A 43 150.26 -35.39
REMARK 500 1 ARG A 54 39.05 35.01
REMARK 500 1 TYR A 76 42.67 -108.79
REMARK 500 2 ARG A 43 142.78 -37.44
REMARK 500 2 ARG A 54 33.61 35.75
REMARK 500 3 GLU A 64 177.33 -59.41
REMARK 500 3 THR A 87 79.01 -113.70
REMARK 500 3 PRO A 92 93.29 -69.78
REMARK 500 3 SER A 94 -52.41 -125.91
REMARK 500 4 GLN A 31 -72.05 -63.78
REMARK 500 4 GLU A 32 -32.77 -35.00
REMARK 500 4 ARG A 43 108.10 -49.79
REMARK 500 4 ARG A 54 41.04 37.96
REMARK 500 4 ASP A 55 40.00 71.04
REMARK 500 4 PRO A 89 95.86 -69.77
REMARK 500 5 SER A 3 -53.14 -126.70
REMARK 500 5 SER A 5 -64.00 -96.68
REMARK 500 5 THR A 44 148.24 -34.27
REMARK 500 5 ARG A 46 118.81 -160.94
REMARK 500 5 ARG A 54 41.78 34.46
REMARK 500 5 TYR A 76 42.91 -108.24
REMARK 500 6 ARG A 54 42.77 36.17
REMARK 500 6 SER A 69 -33.00 -39.26
REMARK 500 6 ASN A 71 -34.37 -34.38
REMARK 500 6 PRO A 89 98.51 -69.78
REMARK 500 6 PRO A 92 -177.61 -69.73
REMARK 500 7 SER A 3 117.19 -166.84
REMARK 500 7 TRP A 13 106.39 -59.99
REMARK 500 7 ARG A 46 109.26 -58.28
REMARK 500 7 ARG A 54 42.00 34.36
REMARK 500 9 SER A 6 116.48 -34.92
REMARK 500 9 SER A 94 129.35 -170.16
REMARK 500 10 SER A 3 124.41 -38.89
REMARK 500 10 VAL A 33 -70.59 -86.34
REMARK 500 10 TYR A 76 43.91 -106.01
REMARK 500 10 PRO A 89 98.09 -69.76
REMARK 500 10 SER A 90 48.11 34.37
REMARK 500 11 ARG A 46 99.98 -60.51
REMARK 500 11 TYR A 76 42.66 -103.57
REMARK 500 11 PRO A 92 91.02 -69.76
REMARK 500 12 SER A 2 155.21 -48.47
REMARK 500 12 ASP A 15 30.95 71.19
REMARK 500 12 THR A 44 -70.74 -56.21
REMARK 500 12 THR A 87 118.54 -170.04
REMARK 500 12 SER A 94 105.15 -45.50
REMARK 500 13 THR A 28 104.95 -49.63
REMARK 500 13 ARG A 54 45.23 39.84
REMARK 500 14 VAL A 33 -72.58 -74.76
REMARK 500 15 ARG A 54 25.02 49.18
REMARK 500 15 ASP A 55 32.37 73.42
REMARK 500
REMARK 500 THIS ENTRY HAS 70 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: HSI002022477.1 RELATED DB: TARGETDB
DBREF 2CS4 A 8 89 UNP Q8NHQ8 RASF8_HUMAN 1 82
SEQADV 2CS4 GLY A 1 UNP Q8NHQ8 CLONING ARTIFACT
SEQADV 2CS4 SER A 2 UNP Q8NHQ8 CLONING ARTIFACT
SEQADV 2CS4 SER A 3 UNP Q8NHQ8 CLONING ARTIFACT
SEQADV 2CS4 GLY A 4 UNP Q8NHQ8 CLONING ARTIFACT
SEQADV 2CS4 SER A 5 UNP Q8NHQ8 CLONING ARTIFACT
SEQADV 2CS4 SER A 6 UNP Q8NHQ8 CLONING ARTIFACT
SEQADV 2CS4 GLY A 7 UNP Q8NHQ8 CLONING ARTIFACT
SEQADV 2CS4 SER A 90 UNP Q8NHQ8 CLONING ARTIFACT
SEQADV 2CS4 GLY A 91 UNP Q8NHQ8 CLONING ARTIFACT
SEQADV 2CS4 PRO A 92 UNP Q8NHQ8 CLONING ARTIFACT
SEQADV 2CS4 SER A 93 UNP Q8NHQ8 CLONING ARTIFACT
SEQADV 2CS4 SER A 94 UNP Q8NHQ8 CLONING ARTIFACT
SEQADV 2CS4 GLY A 95 UNP Q8NHQ8 CLONING ARTIFACT
SEQRES 1 A 95 GLY SER SER GLY SER SER GLY MET GLU LEU LYS VAL TRP
SEQRES 2 A 95 VAL ASP GLY VAL GLN ARG ILE VAL CYS GLY VAL THR GLU
SEQRES 3 A 95 VAL THR THR CYS GLN GLU VAL VAL ILE ALA LEU ALA GLN
SEQRES 4 A 95 ALA ILE GLY ARG THR GLY ARG TYR THR LEU ILE GLU LYS
SEQRES 5 A 95 TRP ARG ASP THR GLU ARG HIS LEU ALA PRO HIS GLU ASN
SEQRES 6 A 95 PRO ILE ILE SER LEU ASN LYS TRP GLY GLN TYR ALA SER
SEQRES 7 A 95 ASP VAL GLN LEU ILE LEU ARG ARG THR GLY PRO SER GLY
SEQRES 8 A 95 PRO SER SER GLY
HELIX 1 1 THR A 29 GLY A 42 1 14
HELIX 2 2 ASN A 65 LYS A 72 1 8
HELIX 3 3 TRP A 73 ALA A 77 5 5
SHEET 1 A 5 VAL A 17 ARG A 19 0
SHEET 2 A 5 VAL A 12 VAL A 14 -1 N VAL A 14 O VAL A 17
SHEET 3 A 5 GLN A 81 GLY A 88 1 O LEU A 82 N TRP A 13
SHEET 4 A 5 ARG A 46 TRP A 53 -1 N LYS A 52 O GLN A 81
SHEET 5 A 5 THR A 56 HIS A 59 -1 O ARG A 58 N GLU A 51
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 9 2 Bytes