Header list of 2cr4.pdb file
Complete list - r 9 2 Bytes
HEADER SIGNALING PROTEIN 20-MAY-05 2CR4
TITLE SOLUTION STRUCTURE OF THE SH2 DOMAIN OF HUMAN SH3BP2 PROTEIN
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: SH3 DOMAIN-BINDING PROTEIN 2;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: SH2 DOMAIN;
COMPND 5 SYNONYM: 3BP-2;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: SH3BP2;
SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040607-02;
SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS
KEYWDS SH2 DOMAIN, 3BP-2, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON
KEYWDS 2 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL
KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI, SIGNALING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR R.HATTA,T.TOMIZAWA,F.HAYASHI,M.YOSHIDA,S.YOKOYAMA,RIKEN STRUCTURAL
AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 3 09-MAR-22 2CR4 1 REMARK SEQADV
REVDAT 2 24-FEB-09 2CR4 1 VERSN
REVDAT 1 20-NOV-05 2CR4 0
JRNL AUTH R.HATTA,T.TOMIZAWA,F.HAYASHI,M.YOSHIDA,S.YOKOYAMA
JRNL TITL SOLUTION STRUCTURE OF THE SH2 DOMAIN OF HUMAN SH3BP2 PROTEIN
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : XWINNMR 2.6, CYANA 2.0.17
REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 2CR4 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-MAY-05.
REMARK 100 THE DEPOSITION ID IS D_1000024531.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 7.0
REMARK 210 IONIC STRENGTH : 120MM
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 1.23MM 13C, 15N-LABELED PROTEIN;
REMARK 210 20MM D-TRIS-HCL (PH7.0); 100MM
REMARK 210 NACL; 1MM DTT; 0.02% NAN3
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C
REMARK 210 -SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ
REMARK 210 SPECTROMETER MODEL : AVANCE
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVEIW 5.0.4,
REMARK 210 KUJIRA 0.9295, CYANA 2.0.17
REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES WITH
REMARK 210 THE LOWEST ENERGY,STRUCTURES
REMARK 210 WITH THE LEAST RESTRAINT
REMARK 210 VIOLATIONS
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 THR A 54 158.75 -49.08
REMARK 500 1 ASP A 79 28.62 49.71
REMARK 500 1 GLU A 87 -30.90 -39.06
REMARK 500 1 HIS A 101 -31.79 -36.60
REMARK 500 1 VAL A 104 146.63 -36.45
REMARK 500 1 ARG A 114 -61.73 -97.13
REMARK 500 2 TYR A 10 75.05 -118.67
REMARK 500 2 LYS A 12 40.68 -81.59
REMARK 500 2 LEU A 46 109.21 -52.97
REMARK 500 2 SER A 56 154.93 -37.29
REMARK 500 2 VAL A 91 -35.86 -34.39
REMARK 500 2 GLN A 109 -76.57 -80.30
REMARK 500 2 ARG A 114 -60.47 -96.11
REMARK 500 2 THR A 120 -74.57 -47.78
REMARK 500 2 SER A 121 119.73 -166.89
REMARK 500 3 ASN A 17 33.25 -84.11
REMARK 500 3 THR A 36 -19.96 -48.29
REMARK 500 3 SER A 53 39.21 -83.66
REMARK 500 3 GLU A 87 -37.56 -36.75
REMARK 500 3 HIS A 101 -32.63 -35.99
REMARK 500 3 VAL A 104 146.13 -34.94
REMARK 500 3 TYR A 119 171.67 -47.21
REMARK 500 4 SER A 5 108.98 -35.84
REMARK 500 4 TYR A 10 69.64 -108.48
REMARK 500 4 LYS A 12 32.75 -86.74
REMARK 500 4 ASN A 17 32.28 -85.17
REMARK 500 4 LEU A 46 104.67 -56.34
REMARK 500 4 SER A 53 74.37 -64.38
REMARK 500 4 LYS A 58 154.66 -48.74
REMARK 500 4 VAL A 91 -26.18 -38.67
REMARK 500 4 VAL A 104 144.01 -39.05
REMARK 500 5 ASP A 9 45.62 -103.60
REMARK 500 5 SER A 52 -64.78 -106.27
REMARK 500 5 GLU A 87 -30.88 -37.95
REMARK 500 5 VAL A 104 147.84 -38.28
REMARK 500 5 ARG A 114 -61.23 -94.53
REMARK 500 5 SER A 125 171.38 -53.73
REMARK 500 6 LEU A 46 104.88 -47.05
REMARK 500 6 SER A 52 67.49 -103.35
REMARK 500 6 GLU A 87 -32.09 -35.10
REMARK 500 6 VAL A 91 -38.92 -39.10
REMARK 500 6 ARG A 114 -60.27 -102.94
REMARK 500 7 SER A 5 -62.04 -98.21
REMARK 500 7 GLU A 8 140.09 -39.03
REMARK 500 7 LEU A 46 103.30 -48.50
REMARK 500 7 ASP A 79 26.51 49.06
REMARK 500 7 GLU A 87 -38.15 -34.31
REMARK 500 7 VAL A 91 -33.44 -35.34
REMARK 500 7 VAL A 104 155.66 -42.52
REMARK 500 7 ARG A 114 -63.29 -96.26
REMARK 500
REMARK 500 THIS ENTRY HAS 172 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: HSS001002513.1 RELATED DB: TARGETDB
DBREF 2CR4 A 8 120 UNP P78314 3BP2_HUMAN 446 558
SEQADV 2CR4 GLY A 1 UNP P78314 CLONING ARTIFACT
SEQADV 2CR4 SER A 2 UNP P78314 CLONING ARTIFACT
SEQADV 2CR4 SER A 3 UNP P78314 CLONING ARTIFACT
SEQADV 2CR4 GLY A 4 UNP P78314 CLONING ARTIFACT
SEQADV 2CR4 SER A 5 UNP P78314 CLONING ARTIFACT
SEQADV 2CR4 SER A 6 UNP P78314 CLONING ARTIFACT
SEQADV 2CR4 GLY A 7 UNP P78314 CLONING ARTIFACT
SEQADV 2CR4 SER A 121 UNP P78314 CLONING ARTIFACT
SEQADV 2CR4 GLY A 122 UNP P78314 CLONING ARTIFACT
SEQADV 2CR4 PRO A 123 UNP P78314 CLONING ARTIFACT
SEQADV 2CR4 SER A 124 UNP P78314 CLONING ARTIFACT
SEQADV 2CR4 SER A 125 UNP P78314 CLONING ARTIFACT
SEQADV 2CR4 GLY A 126 UNP P78314 CLONING ARTIFACT
SEQRES 1 A 126 GLY SER SER GLY SER SER GLY GLU ASP TYR GLU LYS VAL
SEQRES 2 A 126 PRO LEU PRO ASN SER VAL PHE VAL ASN THR THR GLU SER
SEQRES 3 A 126 CYS GLU VAL GLU ARG LEU PHE LYS ALA THR SER PRO ARG
SEQRES 4 A 126 GLY GLU PRO GLN ASP GLY LEU TYR CYS ILE ARG ASN SER
SEQRES 5 A 126 SER THR LYS SER GLY LYS VAL LEU VAL VAL TRP ASP GLU
SEQRES 6 A 126 THR SER ASN LYS VAL ARG ASN TYR ARG ILE PHE GLU LYS
SEQRES 7 A 126 ASP SER LYS PHE TYR LEU GLU GLY GLU VAL LEU PHE VAL
SEQRES 8 A 126 SER VAL GLY SER MET VAL GLU HIS TYR HIS THR HIS VAL
SEQRES 9 A 126 LEU PRO SER HIS GLN SER LEU LEU LEU ARG HIS PRO TYR
SEQRES 10 A 126 GLY TYR THR SER GLY PRO SER SER GLY
HELIX 1 1 GLU A 25 SER A 37 1 13
HELIX 2 2 SER A 92 HIS A 101 1 10
SHEET 1 A 3 TYR A 47 ASN A 51 0
SHEET 2 A 3 LYS A 58 VAL A 62 -1 O VAL A 59 N ARG A 50
SHEET 3 A 3 TYR A 73 ARG A 74 -1 O TYR A 73 N LEU A 60
SHEET 1 B 3 PHE A 76 LYS A 78 0
SHEET 2 B 3 LYS A 81 TYR A 83 -1 O LYS A 81 N LYS A 78
SHEET 3 B 3 LEU A 89 PHE A 90 -1 O PHE A 90 N PHE A 82
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 9 2 Bytes