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HEADER TRANSPORT PROTEIN 20-MAY-05 2CR0 TITLE SOLUTION STRUCTURE OF NUCLEAR MOVE DOMAIN OF NUCLEAR DISTRIBUTION GENE TITLE 2 C COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR MIGRATION PROTEIN NUDC; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NUCLEAR MOVE; COMPND 5 SYNONYM: NUCLEAR DISTRIBUTION PROTEIN C HOMOLOG, SILICA-INDUCED GENE COMPND 6 92 PROTEIN, SIG-92; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: RIKEN CDNA 2700033I24; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P030908-70; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS CS DOMAIN, BETA SANDWICH, STRUCTURAL GENOMICS, NPPSFA, NATIONAL KEYWDS 2 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, TRANSPORT PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2CR0 1 REMARK SEQADV REVDAT 2 24-FEB-09 2CR0 1 VERSN REVDAT 1 20-NOV-05 2CR0 0 JRNL AUTH T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF NUCLEAR MOVE DOMAIN OF NUCLEAR JRNL TITL 2 DISTRIBUTION GENE C JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 2.0.17 REMARK 3 AUTHORS : VARIAN (VNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CR0 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000024527. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.51MM PROTEIN U-13C,15N; 20MM REMARK 210 TRISHCL, 100MM NACL, 1MM DTT, REMARK 210 0.02% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.901, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES WITH REMARK 210 THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 13 31.26 36.90 REMARK 500 1 ALA A 27 -69.16 -94.16 REMARK 500 1 LYS A 75 91.61 -43.91 REMARK 500 1 SER A 79 154.23 -45.39 REMARK 500 1 ASP A 85 27.05 48.14 REMARK 500 1 ILE A 96 -30.96 -37.11 REMARK 500 1 ASN A 113 77.91 -59.65 REMARK 500 2 ASN A 13 38.02 36.38 REMARK 500 2 ARG A 36 70.63 -69.07 REMARK 500 2 LYS A 60 136.38 -39.90 REMARK 500 2 LYS A 75 92.26 -43.74 REMARK 500 2 SER A 79 156.85 -44.88 REMARK 500 2 LYS A 87 -43.25 -131.43 REMARK 500 3 ASN A 10 -75.09 -112.40 REMARK 500 3 ASN A 13 32.77 34.46 REMARK 500 3 LEU A 26 -28.44 -37.19 REMARK 500 3 ARG A 36 80.30 -63.46 REMARK 500 3 LYS A 75 93.10 -46.04 REMARK 500 3 LYS A 87 -31.94 -134.36 REMARK 500 3 MET A 99 32.29 -93.02 REMARK 500 3 THR A 107 -39.57 -33.35 REMARK 500 3 PRO A 118 98.69 -69.81 REMARK 500 4 SER A 3 42.06 -85.61 REMARK 500 4 ASN A 13 33.33 35.28 REMARK 500 4 ARG A 36 49.48 -79.85 REMARK 500 4 LYS A 75 95.68 -43.11 REMARK 500 4 SER A 79 152.90 -47.04 REMARK 500 4 SER A 80 147.30 -170.40 REMARK 500 5 LEU A 26 -28.44 -37.30 REMARK 500 5 ARG A 36 78.58 -60.84 REMARK 500 5 LYS A 60 -72.37 -31.61 REMARK 500 5 LYS A 75 90.74 -49.23 REMARK 500 5 ARG A 104 138.98 -171.73 REMARK 500 5 ASN A 113 96.10 -49.53 REMARK 500 6 SER A 5 -50.01 -125.73 REMARK 500 6 LEU A 11 48.47 -76.54 REMARK 500 6 LEU A 26 -29.86 -36.16 REMARK 500 6 ARG A 36 78.90 -62.84 REMARK 500 6 LYS A 75 95.86 -43.51 REMARK 500 6 SER A 79 153.33 -49.71 REMARK 500 6 MET A 99 32.58 -95.98 REMARK 500 6 PRO A 118 3.14 -69.80 REMARK 500 6 SER A 119 134.61 -33.50 REMARK 500 6 SER A 120 124.61 -36.66 REMARK 500 7 PRO A 9 97.99 -69.69 REMARK 500 7 ASN A 10 -174.88 -65.57 REMARK 500 7 LEU A 11 43.61 -79.55 REMARK 500 7 ALA A 27 -47.56 -133.11 REMARK 500 7 ARG A 36 46.95 -92.61 REMARK 500 7 LYS A 75 95.54 -45.20 REMARK 500 REMARK 500 THIS ENTRY HAS 152 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT007103799.2 RELATED DB: TARGETDB DBREF 2CR0 A 8 115 UNP O35685 NUDC_MOUSE 161 268 SEQADV 2CR0 GLY A 1 UNP O35685 CLONING ARTIFACT SEQADV 2CR0 SER A 2 UNP O35685 CLONING ARTIFACT SEQADV 2CR0 SER A 3 UNP O35685 CLONING ARTIFACT SEQADV 2CR0 GLY A 4 UNP O35685 CLONING ARTIFACT SEQADV 2CR0 SER A 5 UNP O35685 CLONING ARTIFACT SEQADV 2CR0 SER A 6 UNP O35685 CLONING ARTIFACT SEQADV 2CR0 GLY A 7 UNP O35685 CLONING ARTIFACT SEQADV 2CR0 SER A 116 UNP O35685 CLONING ARTIFACT SEQADV 2CR0 GLY A 117 UNP O35685 CLONING ARTIFACT SEQADV 2CR0 PRO A 118 UNP O35685 CLONING ARTIFACT SEQADV 2CR0 SER A 119 UNP O35685 CLONING ARTIFACT SEQADV 2CR0 SER A 120 UNP O35685 CLONING ARTIFACT SEQADV 2CR0 GLY A 121 UNP O35685 CLONING ARTIFACT SEQRES 1 A 121 GLY SER SER GLY SER SER GLY LYS PRO ASN LEU GLY ASN SEQRES 2 A 121 GLY ALA ASP LEU PRO ASN TYR ARG TRP THR GLN THR LEU SEQRES 3 A 121 ALA GLU LEU ASP LEU ALA VAL PRO PHE ARG VAL SER PHE SEQRES 4 A 121 ARG LEU LYS GLY LYS ASP VAL VAL VAL ASP ILE GLN ARG SEQRES 5 A 121 ARG HIS LEU ARG VAL GLY LEU LYS GLY GLN PRO PRO VAL SEQRES 6 A 121 VAL ASP GLY GLU LEU TYR ASN GLU VAL LYS VAL GLU GLU SEQRES 7 A 121 SER SER TRP LEU ILE GLU ASP GLY LYS VAL VAL THR VAL SEQRES 8 A 121 HIS LEU GLU LYS ILE ASN LYS MET GLU TRP TRP ASN ARG SEQRES 9 A 121 LEU VAL THR SER ASP PRO GLU ILE ASN THR LYS SER GLY SEQRES 10 A 121 PRO SER SER GLY SHEET 1 A 5 ALA A 15 ASP A 16 0 SHEET 2 A 5 ARG A 21 GLN A 24 -1 O TRP A 22 N ALA A 15 SHEET 3 A 5 GLU A 28 PRO A 34 -1 O ASP A 30 N THR A 23 SHEET 4 A 5 VAL A 88 GLU A 94 -1 O LEU A 93 N LEU A 29 SHEET 5 A 5 SER A 80 GLU A 84 -1 N SER A 80 O HIS A 92 SHEET 1 B 3 ASP A 49 ILE A 50 0 SHEET 2 B 3 HIS A 54 VAL A 57 -1 O ARG A 56 N ASP A 49 SHEET 3 B 3 VAL A 66 GLU A 69 -1 O VAL A 66 N VAL A 57 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1
Complete list - r 9 2 Bytes