Header list of 2cqr.pdb file
Complete list - r 9 2 Bytes
HEADER MEMBRANE PROTEIN 20-MAY-05 2CQR
TITLE SOLUTION STRUCTURE OF RSGI RUH-043, A MYB DNA-BINDING DOMAIN IN HUMAN
TITLE 2 CDNA
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: DNAJ HOMOLOG SUBFAMILY C MEMBER 1;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: MYB DNA-BINDING DOMAIN;
COMPND 5 SYNONYM: RSGI RUH-043;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: AY225122;
SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P041115-02;
SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS MEMBRANE PROTEIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON
KEYWDS 2 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL
KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR Y.DOI-KATAYAMA,H.HIROTA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL
AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 3 09-MAR-22 2CQR 1 REMARK SEQADV
REVDAT 2 24-FEB-09 2CQR 1 VERSN
REVDAT 1 20-NOV-05 2CQR 0
JRNL AUTH Y.DOI-KATAYAMA,H.HIROTA,F.HAYASHI,S.YOKOYAMA
JRNL TITL SOLUTION STRUCTURE OF RSGI RUH-043, A MYB DNA-BINDING DOMAIN
JRNL TITL 2 IN HUMAN CDNA
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : VNMR 6.1C, CYANA 2.0.17
REMARK 3 AUTHORS : VARIAN (VNMR), GUNTERT, P. (CYANA)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 2CQR COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-MAY-05.
REMARK 100 THE DEPOSITION ID IS D_1000024518.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 7.0
REMARK 210 IONIC STRENGTH : 120MM NACL
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 1.57MM MYB DNA-BINDING DOMAIN U
REMARK 210 -15N, 13C; 20MM D-TRIS-HCL;
REMARK 210 100MM NACL; 1MM D-DTT; 0.02%
REMARK 210 NAN3; 90% H2O, 10% D2O
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C
REMARK 210 -SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ
REMARK 210 SPECTROMETER MODEL : INOVA
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4,
REMARK 210 KUJIRA 0.9295, CYANA 2.0.17
REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH
REMARK 210 THE LOWEST ENERGY, STRUCTURES
REMARK 210 WITH THE LEAST RESTRAINT
REMARK 210 VIOLATIONS
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 SER A 3 98.23 -57.75
REMARK 500 1 GLU A 12 115.12 -173.73
REMARK 500 1 GLN A 23 -33.14 -38.64
REMARK 500 1 PRO A 52 3.13 -69.77
REMARK 500 1 SER A 68 41.54 -96.83
REMARK 500 2 GLU A 12 -44.42 -131.19
REMARK 500 2 GLU A 19 158.30 -38.45
REMARK 500 2 PRO A 37 -165.88 -69.77
REMARK 500 2 SER A 41 31.39 -85.11
REMARK 500 2 PRO A 52 3.24 -69.78
REMARK 500 3 SER A 8 149.21 -36.04
REMARK 500 3 SER A 16 112.22 -38.12
REMARK 500 3 PRO A 37 -177.98 -69.77
REMARK 500 3 ARG A 38 -73.05 -43.78
REMARK 500 3 SER A 40 47.64 -92.78
REMARK 500 3 SER A 41 25.30 39.95
REMARK 500 3 PRO A 52 3.26 -69.76
REMARK 500 3 SER A 68 41.23 -85.37
REMARK 500 3 SER A 71 87.92 -59.15
REMARK 500 3 SER A 72 109.44 -47.51
REMARK 500 4 GLU A 12 142.30 -174.81
REMARK 500 4 ARG A 38 -175.99 -60.82
REMARK 500 4 SER A 40 37.22 36.54
REMARK 500 4 PRO A 52 3.14 -69.74
REMARK 500 4 SER A 68 43.60 -93.84
REMARK 500 5 GLU A 12 138.52 -175.03
REMARK 500 5 SER A 16 35.56 -83.77
REMARK 500 5 SER A 40 45.73 -78.63
REMARK 500 5 PRO A 52 3.22 -69.80
REMARK 500 6 SER A 16 126.89 -39.98
REMARK 500 6 PRO A 37 -163.62 -69.77
REMARK 500 6 SER A 41 32.02 -85.42
REMARK 500 6 PRO A 52 3.16 -69.74
REMARK 500 6 SER A 68 46.35 -82.53
REMARK 500 7 GLU A 12 -77.39 -103.78
REMARK 500 7 ARG A 13 -65.15 -102.17
REMARK 500 7 ALA A 14 -71.37 -102.28
REMARK 500 7 LEU A 33 -31.37 -36.12
REMARK 500 7 ASP A 45 -39.36 -35.62
REMARK 500 7 PRO A 52 3.16 -69.81
REMARK 500 7 SER A 68 44.49 -90.06
REMARK 500 7 SER A 71 123.20 -173.54
REMARK 500 8 SER A 3 119.61 -38.30
REMARK 500 8 ARG A 10 148.20 -173.85
REMARK 500 8 GLU A 18 44.90 -108.34
REMARK 500 8 GLU A 19 150.51 -34.56
REMARK 500 8 PRO A 20 -176.52 -69.76
REMARK 500 8 ARG A 38 -179.76 -59.31
REMARK 500 8 SER A 40 46.01 -90.68
REMARK 500 8 PRO A 52 3.10 -69.73
REMARK 500
REMARK 500 THIS ENTRY HAS 122 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: HSI002023161.2 RELATED DB: TARGETDB
DBREF 2CQR A 8 67 UNP Q96KC8 DNJC1_HUMAN 484 543
SEQADV 2CQR GLY A 1 UNP Q96KC8 CLONING ARTIFACT
SEQADV 2CQR SER A 2 UNP Q96KC8 CLONING ARTIFACT
SEQADV 2CQR SER A 3 UNP Q96KC8 CLONING ARTIFACT
SEQADV 2CQR GLY A 4 UNP Q96KC8 CLONING ARTIFACT
SEQADV 2CQR SER A 5 UNP Q96KC8 CLONING ARTIFACT
SEQADV 2CQR SER A 6 UNP Q96KC8 CLONING ARTIFACT
SEQADV 2CQR GLY A 7 UNP Q96KC8 CLONING ARTIFACT
SEQADV 2CQR CYS A 43 UNP Q96KC8 ARG 519 SEE REMARK 999
SEQADV 2CQR SER A 68 UNP Q96KC8 CLONING ARTIFACT
SEQADV 2CQR GLY A 69 UNP Q96KC8 CLONING ARTIFACT
SEQADV 2CQR PRO A 70 UNP Q96KC8 CLONING ARTIFACT
SEQADV 2CQR SER A 71 UNP Q96KC8 CLONING ARTIFACT
SEQADV 2CQR SER A 72 UNP Q96KC8 CLONING ARTIFACT
SEQADV 2CQR GLY A 73 UNP Q96KC8 CLONING ARTIFACT
SEQRES 1 A 73 GLY SER SER GLY SER SER GLY SER LEU ARG LYS GLU ARG
SEQRES 2 A 73 ALA ARG SER ALA GLU GLU PRO TRP THR GLN ASN GLN GLN
SEQRES 3 A 73 LYS LEU LEU GLU LEU ALA LEU GLN GLN TYR PRO ARG GLY
SEQRES 4 A 73 SER SER ASP CYS TRP ASP LYS ILE ALA ARG CYS VAL PRO
SEQRES 5 A 73 SER LYS SER LYS GLU ASP CYS ILE ALA ARG TYR LYS LEU
SEQRES 6 A 73 LEU VAL SER GLY PRO SER SER GLY
HELIX 1 1 GLN A 23 GLN A 35 1 13
HELIX 2 2 CYS A 43 ARG A 49 1 7
HELIX 3 3 LYS A 56 SER A 68 1 13
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 9 2 Bytes