Header list of 2cpz.pdb file
Complete list - r 9 2 Bytes
HEADER TRANSCRIPTION 19-MAY-05 2CPZ TITLE SOLUTION STRUCTURE OF RNA BINDING DOMAIN 3 IN CUG TRIPLET REPEAT RNA- TITLE 2 BINDING PROTEIN 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CUG TRIPLET REPEAT RNA-BINDING PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RNA RECOGNITION MOTIF; COMPND 5 SYNONYM: CUG-BP1, RNA-BINDING PROTEIN BRUNOL-2, DEADENYLATION FACTOR COMPND 6 CUG-BP, 50 KDA NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN, EDEN-BP; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CUGBP1; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040329-21; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS RRM DOMAIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 2 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.TSUDA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2CPZ 1 REMARK SEQADV REVDAT 2 24-FEB-09 2CPZ 1 VERSN REVDAT 1 19-NOV-05 2CPZ 0 JRNL AUTH K.TSUDA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RNA BINDING DOMAIN 3 IN CUG TRIPLET JRNL TITL 2 REPEAT RNA-BINDING PROTEIN 1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CPZ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000024490. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.37MM 13C/15N-PROTEIN, 20MM D REMARK 210 -TRIS-HCL (PH 7.0), 100MM NACL, REMARK 210 1MM D-DTT, 0.02% NAN3, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9297, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH REMARK 210 THE LOWEST ENERGY, STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 381 41.95 -101.64 REMARK 500 1 LEU A 383 109.48 -47.12 REMARK 500 1 GLN A 385 41.29 -93.91 REMARK 500 1 GLN A 394 36.47 -88.57 REMARK 500 1 ALA A 430 107.53 -160.72 REMARK 500 1 SER A 441 136.75 -35.90 REMARK 500 1 ASN A 463 104.34 -45.27 REMARK 500 1 LYS A 477 112.79 -34.37 REMARK 500 1 ARG A 478 158.53 -48.69 REMARK 500 1 SER A 485 83.42 -64.42 REMARK 500 1 SER A 489 41.66 39.08 REMARK 500 2 ALA A 391 98.33 -54.57 REMARK 500 2 GLN A 394 33.79 -96.04 REMARK 500 2 GLU A 399 97.60 -54.16 REMARK 500 2 LEU A 403 110.38 -160.12 REMARK 500 2 SER A 441 105.87 -38.37 REMARK 500 2 LYS A 442 -174.49 -52.02 REMARK 500 2 ALA A 458 -70.52 -64.02 REMARK 500 2 ASN A 463 99.69 -35.98 REMARK 500 2 PRO A 487 29.54 -79.96 REMARK 500 3 ALA A 390 78.25 -102.11 REMARK 500 3 GLN A 394 30.82 -86.20 REMARK 500 3 PRO A 409 -171.25 -50.46 REMARK 500 3 ASN A 439 33.79 72.66 REMARK 500 3 LYS A 442 -175.49 -53.72 REMARK 500 3 ASN A 463 107.56 -55.97 REMARK 500 3 LYS A 477 104.01 -39.54 REMARK 500 3 LYS A 480 44.77 -84.59 REMARK 500 3 ASP A 482 129.06 -170.48 REMARK 500 3 SER A 485 48.55 -85.70 REMARK 500 3 PRO A 487 104.32 -46.09 REMARK 500 4 ALA A 390 78.84 -104.94 REMARK 500 4 ALA A 430 119.49 -160.91 REMARK 500 4 ASN A 463 100.26 -42.55 REMARK 500 4 LYS A 480 42.17 -105.10 REMARK 500 4 SER A 489 50.00 35.31 REMARK 500 5 GLU A 399 102.51 -53.41 REMARK 500 5 HIS A 407 54.44 73.47 REMARK 500 5 PRO A 409 -179.04 -47.73 REMARK 500 5 ALA A 430 110.29 -161.30 REMARK 500 5 ASN A 439 31.96 71.66 REMARK 500 5 LYS A 442 -174.96 -55.36 REMARK 500 5 LYS A 477 -70.82 -32.38 REMARK 500 5 ASP A 482 130.56 -170.88 REMARK 500 5 SER A 483 170.34 -54.70 REMARK 500 5 LYS A 484 -54.50 -124.64 REMARK 500 6 SER A 381 165.89 -46.20 REMARK 500 6 GLN A 385 41.06 -85.67 REMARK 500 6 SER A 387 43.50 -82.25 REMARK 500 6 ILE A 388 133.65 -39.27 REMARK 500 REMARK 500 THIS ENTRY HAS 194 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSS001001546 RELATED DB: TARGETDB DBREF 2CPZ A 383 484 UNP Q92879 CUGB1_HUMAN 383 484 SEQADV 2CPZ GLY A 376 UNP Q92879 CLONING ARTIFACT SEQADV 2CPZ SER A 377 UNP Q92879 CLONING ARTIFACT SEQADV 2CPZ SER A 378 UNP Q92879 CLONING ARTIFACT SEQADV 2CPZ GLY A 379 UNP Q92879 CLONING ARTIFACT SEQADV 2CPZ SER A 380 UNP Q92879 CLONING ARTIFACT SEQADV 2CPZ SER A 381 UNP Q92879 CLONING ARTIFACT SEQADV 2CPZ GLY A 382 UNP Q92879 CLONING ARTIFACT SEQADV 2CPZ SER A 485 UNP Q92879 CLONING ARTIFACT SEQADV 2CPZ GLY A 486 UNP Q92879 CLONING ARTIFACT SEQADV 2CPZ PRO A 487 UNP Q92879 CLONING ARTIFACT SEQADV 2CPZ SER A 488 UNP Q92879 CLONING ARTIFACT SEQADV 2CPZ SER A 489 UNP Q92879 CLONING ARTIFACT SEQADV 2CPZ GLY A 490 UNP Q92879 CLONING ARTIFACT SEQRES 1 A 115 GLY SER SER GLY SER SER GLY LEU THR GLN GLN SER ILE SEQRES 2 A 115 GLY ALA ALA GLY SER GLN LYS GLU GLY PRO GLU GLY ALA SEQRES 3 A 115 ASN LEU PHE ILE TYR HIS LEU PRO GLN GLU PHE GLY ASP SEQRES 4 A 115 GLN ASP LEU LEU GLN MET PHE MET PRO PHE GLY ASN VAL SEQRES 5 A 115 VAL SER ALA LYS VAL PHE ILE ASP LYS GLN THR ASN LEU SEQRES 6 A 115 SER LYS CYS PHE GLY PHE VAL SER TYR ASP ASN PRO VAL SEQRES 7 A 115 SER ALA GLN ALA ALA ILE GLN SER MET ASN GLY PHE GLN SEQRES 8 A 115 ILE GLY MET LYS ARG LEU LYS VAL GLN LEU LYS ARG SER SEQRES 9 A 115 LYS ASN ASP SER LYS SER GLY PRO SER SER GLY HELIX 1 1 GLY A 413 MET A 422 1 10 HELIX 2 2 PRO A 423 GLY A 425 5 3 HELIX 3 3 ASN A 451 ASN A 463 1 13 SHEET 1 A 4 SER A 429 ILE A 434 0 SHEET 2 A 4 SER A 441 SER A 448 -1 O LYS A 442 N PHE A 433 SHEET 3 A 4 LEU A 403 TYR A 406 -1 N LEU A 403 O VAL A 447 SHEET 4 A 4 LYS A 473 GLN A 475 -1 O LYS A 473 N TYR A 406 SHEET 1 B 2 GLN A 466 ILE A 467 0 SHEET 2 B 2 LYS A 470 ARG A 471 -1 O LYS A 470 N ILE A 467 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1
Complete list - r 9 2 Bytes