Header list of 2cpc.pdb file
Complete list - r 9 2 Bytes
HEADER IMMUNE SYSTEM 19-MAY-05 2CPC TITLE SOLUTION STRUCTURE OF RSGI RUH-030, AN IG LIKE DOMAIN FROM HUMAN CDNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: KIAA0657 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: IG LIKE DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: P040202-73; SOURCE 7 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS (E.COLI) KEYWDS IMMUNOGLOBULIN DOMAIN, IG DOMAIN, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, KEYWDS 3 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, IMMUNE SYSTEM EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.Z.M.RUHUL MOMEN,H.ONUKI,H.HIROTA,F.HAYASHI,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2CPC 1 REMARK SEQADV REVDAT 2 24-FEB-09 2CPC 1 VERSN REVDAT 1 19-NOV-05 2CPC 0 JRNL AUTH A.Z.M.RUHUL MOMEN,H.ONUKI,H.HIROTA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RSGI RUH-030, AN IG LIKE DOMAIN FROM JRNL TITL 2 HUMAN CDNA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C REMARK 3 AUTHORS : VARIAN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CPC COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000024475. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.66MM IG DOMAIN U 15N, 13C; REMARK 210 20MM D-TRIS-HCL(PH 7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMEVIEW 5.0.4, REMARK 210 KIJIRA 0.9295, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES WITH REMARK 210 THE LOWEST ENERGY,STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 9 88.70 -63.02 REMARK 500 1 SER A 11 -61.41 -99.28 REMARK 500 1 SER A 18 64.10 -104.57 REMARK 500 1 PRO A 57 4.03 -69.76 REMARK 500 1 ALA A 74 107.76 -167.72 REMARK 500 1 ASP A 88 -72.42 -135.02 REMARK 500 1 ARG A 104 -46.74 -134.30 REMARK 500 1 ILE A 105 105.33 -55.92 REMARK 500 1 SER A 111 100.26 -56.54 REMARK 500 2 SER A 18 64.94 -104.99 REMARK 500 2 GLU A 55 147.50 -38.44 REMARK 500 2 PRO A 57 3.11 -69.70 REMARK 500 2 ASP A 65 -71.40 -50.06 REMARK 500 2 ALA A 74 110.57 -166.96 REMARK 500 2 ILE A 87 -76.59 -112.85 REMARK 500 2 ASP A 88 -71.68 -113.06 REMARK 500 2 TYR A 107 39.25 -95.95 REMARK 500 3 THR A 8 41.68 -89.82 REMARK 500 3 SER A 11 -61.89 -91.98 REMARK 500 3 ILE A 14 92.26 -64.86 REMARK 500 3 SER A 18 65.57 -106.79 REMARK 500 3 TRP A 41 40.81 -81.96 REMARK 500 3 PRO A 57 5.01 -69.79 REMARK 500 3 ALA A 74 105.01 -163.89 REMARK 500 3 ASP A 88 -72.26 -134.98 REMARK 500 3 ARG A 104 -58.69 -130.77 REMARK 500 4 SER A 2 106.02 -51.56 REMARK 500 4 SER A 12 110.17 -34.97 REMARK 500 4 SER A 18 63.74 -102.67 REMARK 500 4 ASP A 49 40.34 72.28 REMARK 500 4 PRO A 57 1.49 -69.71 REMARK 500 4 ALA A 74 105.45 -160.34 REMARK 500 4 ILE A 87 -61.09 -109.64 REMARK 500 4 ASP A 88 -71.89 -133.93 REMARK 500 5 SER A 3 164.37 -47.38 REMARK 500 5 SER A 12 105.86 -34.56 REMARK 500 5 SER A 18 65.04 -104.89 REMARK 500 5 TRP A 41 33.04 -82.71 REMARK 500 5 ASP A 49 36.11 72.57 REMARK 500 5 PRO A 57 2.99 -69.78 REMARK 500 5 ALA A 74 105.60 -160.45 REMARK 500 5 ASP A 88 -72.55 -135.02 REMARK 500 5 ARG A 104 -44.45 -130.19 REMARK 500 6 SER A 12 114.42 -165.24 REMARK 500 6 TYR A 16 145.37 -173.23 REMARK 500 6 SER A 18 64.47 -105.97 REMARK 500 6 ASP A 49 35.80 71.27 REMARK 500 6 PRO A 57 1.42 -69.80 REMARK 500 6 ASP A 88 -72.95 -135.04 REMARK 500 6 PRO A 110 99.48 -69.79 REMARK 500 REMARK 500 THIS ENTRY HAS 182 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002100640.1 RELATED DB: TARGETDB DBREF 2CPC A 8 107 UNP O75147 O75147_HUMAN 729 828 SEQADV 2CPC GLY A 1 UNP O75147 CLONING ARTIFACT SEQADV 2CPC SER A 2 UNP O75147 CLONING ARTIFACT SEQADV 2CPC SER A 3 UNP O75147 CLONING ARTIFACT SEQADV 2CPC GLY A 4 UNP O75147 CLONING ARTIFACT SEQADV 2CPC SER A 5 UNP O75147 CLONING ARTIFACT SEQADV 2CPC SER A 6 UNP O75147 CLONING ARTIFACT SEQADV 2CPC GLY A 7 UNP O75147 CLONING ARTIFACT SEQADV 2CPC SER A 108 UNP O75147 CLONING ARTIFACT SEQADV 2CPC GLY A 109 UNP O75147 CLONING ARTIFACT SEQADV 2CPC PRO A 110 UNP O75147 CLONING ARTIFACT SEQADV 2CPC SER A 111 UNP O75147 CLONING ARTIFACT SEQADV 2CPC SER A 112 UNP O75147 CLONING ARTIFACT SEQADV 2CPC GLY A 113 UNP O75147 CLONING ARTIFACT SEQRES 1 A 113 GLY SER SER GLY SER SER GLY THR ASP VAL SER SER TRP SEQRES 2 A 113 ILE VAL TYR PRO SER GLY LYS VAL TYR VAL ALA ALA VAL SEQRES 3 A 113 ARG LEU GLU ARG VAL VAL LEU THR CYS GLU LEU CYS ARG SEQRES 4 A 113 PRO TRP ALA GLU VAL ARG TRP THR LYS ASP GLY GLU GLU SEQRES 5 A 113 VAL VAL GLU SER PRO ALA LEU LEU LEU GLN LYS GLU ASP SEQRES 6 A 113 THR VAL ARG ARG LEU VAL LEU PRO ALA VAL GLN LEU GLU SEQRES 7 A 113 ASP SER GLY GLU TYR LEU CYS GLU ILE ASP ASP GLU SER SEQRES 8 A 113 ALA SER PHE THR VAL THR VAL THR GLU PRO PRO VAL ARG SEQRES 9 A 113 ILE ILE TYR SER GLY PRO SER SER GLY SHEET 1 A 4 ILE A 14 TYR A 16 0 SHEET 2 A 4 VAL A 31 LEU A 37 -1 O GLU A 36 N TYR A 16 SHEET 3 A 4 VAL A 67 LEU A 72 -1 O ARG A 68 N CYS A 35 SHEET 4 A 4 LEU A 60 LYS A 63 -1 N GLN A 62 O ARG A 69 SHEET 1 B 5 VAL A 21 VAL A 26 0 SHEET 2 B 5 SER A 91 THR A 99 1 O THR A 95 N VAL A 21 SHEET 3 B 5 GLY A 81 GLU A 86 -1 N CYS A 85 O ALA A 92 SHEET 4 B 5 ARG A 45 LYS A 48 -1 N THR A 47 O LEU A 84 SHEET 5 B 5 GLU A 51 GLU A 52 -1 O GLU A 51 N LYS A 48 CISPEP 1 TYR A 16 PRO A 17 1 -0.06 CISPEP 2 TYR A 16 PRO A 17 2 -0.07 CISPEP 3 TYR A 16 PRO A 17 3 -0.03 CISPEP 4 TYR A 16 PRO A 17 4 -0.09 CISPEP 5 TYR A 16 PRO A 17 5 -0.12 CISPEP 6 TYR A 16 PRO A 17 6 -0.05 CISPEP 7 TYR A 16 PRO A 17 7 -0.06 CISPEP 8 TYR A 16 PRO A 17 8 -0.03 CISPEP 9 TYR A 16 PRO A 17 9 -0.07 CISPEP 10 TYR A 16 PRO A 17 10 -0.03 CISPEP 11 TYR A 16 PRO A 17 11 -0.07 CISPEP 12 TYR A 16 PRO A 17 12 -0.03 CISPEP 13 TYR A 16 PRO A 17 13 -0.01 CISPEP 14 TYR A 16 PRO A 17 14 -0.01 CISPEP 15 TYR A 16 PRO A 17 15 -0.12 CISPEP 16 TYR A 16 PRO A 17 16 -0.05 CISPEP 17 TYR A 16 PRO A 17 17 -0.01 CISPEP 18 TYR A 16 PRO A 17 18 -0.08 CISPEP 19 TYR A 16 PRO A 17 19 -0.15 CISPEP 20 TYR A 16 PRO A 17 20 -0.07 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1
Complete list - r 9 2 Bytes