Header list of 2c55.pdb file
Complete list - 25 201 Bytes
HEADER VIRAL PROTEIN 25-OCT-05 2C55
TITLE SOLUTION STRUCTURE OF THE HUMAN IMMUNODEFICIENCY VIRUS TYPE
TITLE 2 1 P6 PROTEIN
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: PROTEIN P6;
COMPND 3 CHAIN: A;
COMPND 4 OTHER_DETAILS: P6 SEQUENCE DERIVED FROM THE ISOLATE HIV-
COMPND 5 1NL4-3
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES;
SOURCE 3 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1;
SOURCE 4 ORGANISM_COMMON: HIV-1;
SOURCE 5 ORGANISM_TAXID: 11676;
SOURCE 6 OTHER_DETAILS: P6 SEQUENCE DERIVED FROM THE ISOLATE HIV-
SOURCE 7 1NL4-3
KEYWDS P6, HIV-1, P6-GAG, AIDS, CORE PROTEIN, LIPOPROTEIN,
KEYWDS 2 MEMBRANE, METAL-BINDING, MYRISTATE, PHOSPHORYLATION,
KEYWDS 3 POLYPROTEIN, RNA-BINDING, VIRAL NUCLEOPROTEIN, ZINC, ZINC-
KEYWDS 4 FINGER, VIRAL PROTEIN
EXPDTA SOLUTION NMR
MDLTYP MINIMIZED AVERAGE
AUTHOR T.FOSSEN,V.WRAY,K.BRUNS,J.RACHMAT,P.HENKLEIN,U.TESSMER,
AUTHOR 2 A.MACZUREK,P.KLINGER,U.SCHUBERT
REVDAT 3 24-FEB-09 2C55 1 VERSN
REVDAT 2 04-JAN-06 2C55 1 JRNL
REVDAT 1 02-NOV-05 2C55 0
JRNL AUTH T.FOSSEN,V.WRAY,K.BRUNS,J.RACHMAT,P.HENKLEIN,
JRNL AUTH 2 U.TESSMER,A.MACZUREK,P.KLINGER,U.SCHUBERT
JRNL TITL SOLUTION STRUCTURE OF THE HUMAN IMMUNODEFICIENCY
JRNL TITL 2 VIRUS TYPE 1 P6 PROTEIN.
JRNL REF J.BIOL.CHEM. V. 280 42515 2005
JRNL REFN ISSN 0021-9258
JRNL PMID 16234236
JRNL DOI 10.1074/JBC.M507375200
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : CNS 1.0
REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS, GROSSE-
REMARK 3 KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ,
REMARK 3 RICE,SIMONSON,WARREN
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT DETAILS CAN BE FOUND IN
REMARK 3 THE JRNL CITATION ABOVE
REMARK 4
REMARK 4 2C55 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-OCT-05.
REMARK 100 THE PDBE ID CODE IS EBI-26163.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 300.0
REMARK 210 PH : 3.0
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : 1.0
REMARK 210 SAMPLE CONTENTS : 50% WATER/50% TFE-D2
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY, TOCSY; COSY
REMARK 210 SPECTROMETER FIELD STRENGTH : 600
REMARK 210 SPECTROMETER MODEL : DMX
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : CNS 1.0
REMARK 210 METHOD USED : NULL
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 104
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1
REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATION
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL
REMARK 210
REMARK 210 REMARK: NONE
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 400
REMARK 400 COMPOUND
REMARK 400 PARTICIPATES IN BUDDING OF THE ASSEMBLED PARTICLE BY
REMARK 400 INTERACTING WITH TSG101
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 ARG A 16 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 SER A 3 -169.25 -103.10
REMARK 500 ALA A 9 132.59 63.31
REMARK 500 PRO A 10 87.61 -21.75
REMARK 500 PRO A 11 58.48 -93.27
REMARK 500 THR A 21 40.48 -97.67
REMARK 500 LYS A 27 160.70 59.94
REMARK 500 GLN A 28 173.44 58.54
REMARK 500 ASP A 32 33.35 -140.48
REMARK 500 LYS A 33 -54.54 -135.00
REMARK 500 SER A 47 39.05 -145.83
REMARK 500 SER A 50 88.39 -63.63
REMARK 500
REMARK 500 REMARK: NULL
REMARK 999
REMARK 999 SEQUENCE
REMARK 999 P6 SEQUENCE DERIVED FROM THE ISOLATE HIV-1NL4-3
DBREF 2C55 A 1 52 UNP P12493 GAG_HV1N5 448 499
SEQRES 1 A 52 LEU GLN SER ARG PRO GLU PRO THR ALA PRO PRO GLU GLU
SEQRES 2 A 52 SER PHE ARG PHE GLY GLU GLU THR THR THR PRO SER GLN
SEQRES 3 A 52 LYS GLN GLU PRO ILE ASP LYS GLU LEU TYR PRO LEU ALA
SEQRES 4 A 52 SER LEU ARG SER LEU PHE GLY SER ASP PRO SER SER GLN
HELIX 1 1 PHE A 17 THR A 21 5 5
HELIX 2 2 LEU A 38 SER A 43 5 6
HELIX 3 3 SER A 43 SER A 47 5 5
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
Complete list - 25 201 Bytes