Header list of 2aqe.pdb file
Complete list - r 9 2 Bytes
HEADER TRANSCRIPTION 17-AUG-05 2AQE
TITLE STRUCTURAL AND FUNCTIONAL ANALYSIS OF ADA2 ALPHA SWIRM DOMAIN
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: TRANSCRIPTIONAL ADAPTOR 2, ADA2 ALPHA;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: SWIRM DOMAIN, RESIDUES 355-443;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS;
SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE;
SOURCE 4 ORGANISM_TAXID: 10090;
SOURCE 5 GENE: TADA21;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET32A
KEYWDS HELIX-TURN-HELIX, TRANSCRIPTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR C.QIAN,Q.ZHANG,L.ZENG,M.-M.ZHOU
REVDAT 3 09-MAR-22 2AQE 1 REMARK SEQADV
REVDAT 2 24-FEB-09 2AQE 1 VERSN
REVDAT 1 13-DEC-05 2AQE 0
JRNL AUTH C.QIAN,Q.ZHANG,S.D.LI,L.ZENG,M.J.WALSH,M.-M.ZHOU
JRNL TITL STRUCTURE AND CHROMOSOMAL DNA BINDING OF THE SWIRM DOMAIN
JRNL REF NAT.STRUCT.MOL.BIOL. V. 12 1078 2005
JRNL REFN ISSN 1545-9993
JRNL PMID 16299514
JRNL DOI 10.1038/NSMB1022
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : NMRPIPE, CNS 1.1, ARIA 1.2
REMARK 3 AUTHORS : BAX, A. (NMRPIPE), BRUNGER ET AL (CNS), NIGLES, M.
REMARK 3 (ARIA)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 2AQE COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-SEP-05.
REMARK 100 THE DEPOSITION ID IS D_1000034190.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 293
REMARK 210 PH : 6.5
REMARK 210 IONIC STRENGTH : 100 MM NACL
REMARK 210 PRESSURE : 1 ATM
REMARK 210 SAMPLE CONTENTS : 1MM ADA2 ALPHA SWIRM DOMAIN, U
REMARK 210 -15N,13C, 50MM PHOSPHATE BUFFER,
REMARK 210 100MM NACL, PH 6.5, 90% H2O, 10%
REMARK 210 D2O; 1MM ADA2 ALPHA SWIRM DOMAIN,
REMARK 210 U-15N, 13C, 50MM PHOSPHATE
REMARK 210 BUFFER, 100MM NACL, PH 6.5, 100%
REMARK 210 D2O
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N
REMARK 210 -SEPARATED_NOESY; HNHA; HNCACB;
REMARK 210 HN(CO)CACB
REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 500 MHZ
REMARK 210 SPECTROMETER MODEL : DRX
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRVIEW 5.0
REMARK 210 METHOD USED : SIMULATED ANNEALING TORSION
REMARK 210 ANGLE DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST
REMARK 210 ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O ASN A 24 H LYS A 28 1.55
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 PRO A 11 -158.27 -72.35
REMARK 500 1 LEU A 12 -79.83 -135.20
REMARK 500 1 ARG A 35 91.25 -29.02
REMARK 500 1 PRO A 38 -71.18 -62.27
REMARK 500 1 LEU A 66 -72.02 -90.52
REMARK 500 1 LYS A 68 -134.03 42.24
REMARK 500 1 ILE A 69 -33.13 -149.45
REMARK 500 1 ASP A 70 -91.36 -109.42
REMARK 500 1 VAL A 71 -45.34 -175.61
REMARK 500 1 ILE A 82 -77.81 -51.10
REMARK 500 1 TYR A 86 -75.12 -120.62
REMARK 500 1 ILE A 87 -147.84 -103.43
REMARK 500 2 ASN A 3 -72.18 -128.37
REMARK 500 2 ARG A 7 96.99 52.97
REMARK 500 2 SER A 8 -145.78 -170.08
REMARK 500 2 ALA A 9 168.19 -47.49
REMARK 500 2 PRO A 10 106.68 -46.84
REMARK 500 2 LEU A 12 -78.53 -89.60
REMARK 500 2 ASN A 13 18.07 -144.69
REMARK 500 2 ARG A 35 92.42 -31.56
REMARK 500 2 LEU A 36 -152.75 -126.16
REMARK 500 2 LEU A 66 -77.25 -90.33
REMARK 500 2 LYS A 68 -153.36 46.87
REMARK 500 2 ILE A 69 -34.35 -137.36
REMARK 500 2 ASP A 70 -162.09 -108.26
REMARK 500 3 LEU A 12 -73.34 -121.64
REMARK 500 3 ASN A 13 -42.25 -144.47
REMARK 500 3 PRO A 18 -80.10 -59.14
REMARK 500 3 ARG A 35 94.18 -29.07
REMARK 500 3 ARG A 59 168.07 -49.07
REMARK 500 3 LEU A 66 -70.47 -90.90
REMARK 500 3 LYS A 68 -125.61 38.98
REMARK 500 3 ILE A 69 -7.76 -156.90
REMARK 500 3 ASP A 70 -89.90 -135.95
REMARK 500 3 VAL A 71 -44.12 -172.07
REMARK 500 3 TYR A 86 -43.60 -152.18
REMARK 500 3 ILE A 87 -155.31 -140.74
REMARK 500 4 SER A 2 88.66 -168.64
REMARK 500 4 ASN A 3 -60.10 -127.65
REMARK 500 4 ARG A 7 -170.20 53.86
REMARK 500 4 PRO A 10 107.86 -59.21
REMARK 500 4 LEU A 12 -84.33 -85.43
REMARK 500 4 ASN A 24 172.27 -48.18
REMARK 500 4 ARG A 35 91.57 -30.50
REMARK 500 4 LEU A 66 -83.77 -72.98
REMARK 500 4 LYS A 68 -154.70 51.53
REMARK 500 4 ILE A 69 -32.77 -143.11
REMARK 500 4 ASP A 70 -90.97 -100.47
REMARK 500 4 VAL A 71 -47.21 -176.74
REMARK 500 4 TYR A 86 -50.06 -149.47
REMARK 500
REMARK 500 THIS ENTRY HAS 272 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 2AQF RELATED DB: PDB
REMARK 900 NMR STRUCTURE OF ADA2 ALPHA SWIRM DOMAIN
DBREF 2AQE A 2 90 UNP Q8BNK0 Q8BNK0_MOUSE 355 443
SEQADV 2AQE GLY A 1 UNP Q8BNK0 CLONING ARTIFACT
SEQRES 1 A 90 GLY SER ASN SER GLY ARG ARG SER ALA PRO PRO LEU ASN
SEQRES 2 A 90 LEU THR GLY LEU PRO GLY THR GLU LYS LEU ASN GLU LYS
SEQRES 3 A 90 GLU LYS GLU LEU CYS GLN VAL VAL ARG LEU VAL PRO GLY
SEQRES 4 A 90 ALA TYR LEU GLU TYR LYS SER ALA LEU LEU ASN GLU CYS
SEQRES 5 A 90 HIS LYS GLN GLY GLY LEU ARG LEU ALA GLN ALA ARG ALA
SEQRES 6 A 90 LEU ILE LYS ILE ASP VAL ASN LYS THR ARG LYS ILE TYR
SEQRES 7 A 90 ASP PHE LEU ILE ARG GLU GLY TYR ILE THR LYS ALA
HELIX 1 1 ASN A 24 VAL A 34 1 11
HELIX 2 2 VAL A 37 GLY A 56 1 20
HELIX 3 3 ARG A 59 ALA A 65 1 7
HELIX 4 4 VAL A 71 GLU A 84 1 14
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 9 2 Bytes