Header list of 1xpw.pdb file
Complete list - r 2 2 Bytes
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 09-OCT-04 1XPW
TITLE SOLUTION NMR STRUCTURE OF HUMAN PROTEIN HSPCO34. NORTHEAST STRUCTURAL
TITLE 2 GENOMICS TARGET HR1958
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: LOC51668 PROTEIN;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: HSPC034;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: PP25;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (LAMDA DE3) PMGK;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET14
KEYWDS GENE PP25, LOCUS LOC51668, C1ORF41, HOMO SAPIENS, NESGC CLUSTER ID
KEYWDS 2 3237, TARGET HR1958, STRUCTURAL GENOMICS, APC10-RELATED PROTEIN,
KEYWDS 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, PROTEIN STRUCTURE
KEYWDS 4 INITIATIVE, PSI, JELLYROLL, BETA-SANDWICH, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR T.A.RAMELOT,R.XIAO,L.C.MA,T.B.ACTON,G.T.MONTELIONE,M.A.KENNEDY,
AUTHOR 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG)
REVDAT 6 02-MAR-22 1XPW 1 REMARK SEQADV
REVDAT 5 09-JUN-09 1XPW 1 JRNL
REVDAT 4 24-FEB-09 1XPW 1 VERSN
REVDAT 3 12-JUL-05 1XPW 1 REMARK MASTER
REVDAT 2 25-JAN-05 1XPW 1 AUTHOR REMARK
REVDAT 1 09-NOV-04 1XPW 0
JRNL AUTH T.A.RAMELOT,S.RAMAN,A.P.KUZIN,R.XIAO,L.C.MA,T.B.ACTON,
JRNL AUTH 2 J.F.HUNT,G.T.MONTELIONE,D.BAKER,M.A.KENNEDY
JRNL TITL IMPROVING NMR PROTEIN STRUCTURE QUALITY BY ROSETTA
JRNL TITL 2 REFINEMENT: A MOLECULAR REPLACEMENT STUDY.
JRNL REF PROTEINS V. 75 147 2009
JRNL REFN ISSN 0887-3585
JRNL PMID 18816799
JRNL DOI 10.1002/PROT.22229
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : NMRPIPE NMRPIPE.LINUX, CNS 1.1
REMARK 3 AUTHORS : DELAGLIO (NMRPIPE), BRUNGER (CNS)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: THE UNSTRUCTURED 10 RESIDUE N-TERMINAL
REMARK 3 HIS TAG (MGHHHHHHSH) WAS NOT INCLUDED IN THE STRUCTURE
REMARK 3 CALCULATION.
REMARK 4
REMARK 4 1XPW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-OCT-04.
REMARK 100 THE DEPOSITION ID IS D_1000030626.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 6.5
REMARK 210 IONIC STRENGTH : 100 MM NACL
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 1 MM U-15N,13C PROTEIN, 20 MM
REMARK 210 MES, 100 MM NACL, 10 MM DTT, 5
REMARK 210 MM CACL2, 0.02% NAN3, 95% H2O, 5%
REMARK 210 D2O; 1 MM U-15N,13C PROTEIN, 20
REMARK 210 MM MES, 100 MM NACL, 10 MM DTT,
REMARK 210 5 MM CACL2, 0.02% NAN3, 100% D2O;
REMARK 210 1 MM U-15N,5%-13C PROTEIN, 20
REMARK 210 MM MES, 100 MM NACL, 10 MM DTT,
REMARK 210 5 MM CACL2, 0.02% NAN3, 95% H2O,
REMARK 210 5% D2O
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C
REMARK 210 -SEPARATED_NOESY; HNHA; 13C_HSQC;
REMARK 210 4D_13C-SEPARATED_NOESY; H/D
REMARK 210 EXCHANGE
REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 750 MHZ; 600 MHZ
REMARK 210 SPECTROMETER MODEL : INOVA; UNITY
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : FELIX 98, AUTOSTRUCTURE 2.1.0, X
REMARK 210 -PLOR XPLOR-NIH-2.0.6, SPARKY
REMARK 210 3.106
REMARK 210 METHOD USED : XPLOR SIMULATED ANNEALING, CNS
REMARK 210 WATER REFINEMENT
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 25
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST
REMARK 210 RESTRAINT VIOLATIONS
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 400
REMARK 400 COMPOUND
REMARK 400 THIS PROTEIN HAS STOICHIOMETRIC CALCIUM BOUND. CALCIUM
REMARK 400 COORDINATION COULD NOT BE DETERMINED, BUT IS CONSISTENT
REMARK 400 WITH PDB ENTRY 1TVG
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465 MODELS 1-20
REMARK 465 RES C SSSEQI
REMARK 465 MET A -9
REMARK 465 GLY A -8
REMARK 465 HIS A -7
REMARK 465 HIS A -6
REMARK 465 HIS A -5
REMARK 465 HIS A -4
REMARK 465 HIS A -3
REMARK 465 HIS A -2
REMARK 465 SER A -1
REMARK 465 HIS A 0
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 HZ3 LYS A 3 OE1 GLU A 60 1.59
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 ARG A 2 -170.91 61.58
REMARK 500 1 LYS A 3 70.82 53.15
REMARK 500 1 HIS A 25 74.61 -111.04
REMARK 500 1 PHE A 68 -23.55 73.38
REMARK 500 1 PRO A 82 46.11 -70.10
REMARK 500 1 ASP A 84 84.48 57.25
REMARK 500 1 TRP A 88 -68.93 -96.16
REMARK 500 1 HIS A 95 106.67 -57.05
REMARK 500 2 ARG A 2 23.48 -167.35
REMARK 500 2 LEU A 17 90.28 70.34
REMARK 500 2 ILE A 31 -87.13 -107.96
REMARK 500 2 ASP A 32 -46.14 69.27
REMARK 500 2 THR A 42 36.36 -89.52
REMARK 500 2 PHE A 68 -96.75 65.48
REMARK 500 2 VAL A 69 -168.28 55.90
REMARK 500 2 GLN A 70 -68.32 177.44
REMARK 500 2 PRO A 82 34.43 -77.99
REMARK 500 2 ASP A 84 98.15 61.55
REMARK 500 2 TRP A 88 -79.46 -130.83
REMARK 500 2 LEU A 141 54.22 -93.58
REMARK 500 3 LEU A 17 131.85 73.97
REMARK 500 3 PHE A 68 -93.25 69.32
REMARK 500 3 VAL A 69 -158.42 52.65
REMARK 500 3 GLN A 70 -72.76 177.53
REMARK 500 3 LYS A 80 -49.29 71.81
REMARK 500 3 TRP A 88 -74.11 -100.75
REMARK 500 3 VAL A 138 -71.89 -89.84
REMARK 500 3 LEU A 141 46.29 -93.85
REMARK 500 4 LYS A 3 89.43 70.46
REMARK 500 4 LEU A 17 80.11 62.14
REMARK 500 4 ASP A 32 -67.82 -101.26
REMARK 500 4 HIS A 54 -2.51 67.59
REMARK 500 4 GLN A 70 -88.17 -113.20
REMARK 500 4 PRO A 82 44.67 -75.39
REMARK 500 4 ASP A 84 87.53 64.91
REMARK 500 4 TRP A 88 -73.43 -75.46
REMARK 500 4 ASN A 140 -164.70 -78.78
REMARK 500 4 SER A 142 -49.95 -154.09
REMARK 500 5 ARG A 2 124.56 68.79
REMARK 500 5 LEU A 17 -89.98 73.20
REMARK 500 5 ALA A 18 92.99 55.45
REMARK 500 5 ILE A 31 -86.57 -118.90
REMARK 500 5 ASP A 32 -51.16 68.70
REMARK 500 5 HIS A 54 -5.62 69.35
REMARK 500 5 PHE A 68 -25.90 77.14
REMARK 500 5 GLN A 70 -63.65 -120.23
REMARK 500 5 PRO A 82 38.01 -78.14
REMARK 500 5 ASP A 84 80.45 64.15
REMARK 500 5 TRP A 88 -72.80 -92.96
REMARK 500 5 SER A 130 142.10 -171.11
REMARK 500
REMARK 500 THIS ENTRY HAS 182 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1TVG RELATED DB: PDB
REMARK 900 X-RAY CRYSTAL STRUCTURE OF IDENTICAL PROTEIN
REMARK 900 RELATED ID: HR1958 RELATED DB: TARGETDB
DBREF 1XPW A 1 143 UNP Q9Y547 Q9Y547_HUMAN 1 144
SEQADV 1XPW MET A -9 UNP Q9Y547 EXPRESSION TAG
SEQADV 1XPW GLY A -8 UNP Q9Y547 EXPRESSION TAG
SEQADV 1XPW HIS A -7 UNP Q9Y547 EXPRESSION TAG
SEQADV 1XPW HIS A -6 UNP Q9Y547 EXPRESSION TAG
SEQADV 1XPW HIS A -5 UNP Q9Y547 EXPRESSION TAG
SEQADV 1XPW HIS A -4 UNP Q9Y547 EXPRESSION TAG
SEQADV 1XPW HIS A -3 UNP Q9Y547 EXPRESSION TAG
SEQADV 1XPW HIS A -2 UNP Q9Y547 EXPRESSION TAG
SEQADV 1XPW SER A -1 UNP Q9Y547 EXPRESSION TAG
SEQADV 1XPW HIS A 0 UNP Q9Y547 EXPRESSION TAG
SEQADV 1XPW A UNP Q9Y547 ASP 109 DELETION
SEQRES 1 A 153 MET GLY HIS HIS HIS HIS HIS HIS SER HIS MET ARG LYS
SEQRES 2 A 153 ILE ASP LEU CYS LEU SER SER GLU GLY SER GLU VAL ILE
SEQRES 3 A 153 LEU ALA THR SER SER ASP GLU LYS HIS PRO PRO GLU ASN
SEQRES 4 A 153 ILE ILE ASP GLY ASN PRO GLU THR PHE TRP THR THR THR
SEQRES 5 A 153 GLY MET PHE PRO GLN GLU PHE ILE ILE CYS PHE HIS LYS
SEQRES 6 A 153 HIS VAL ARG ILE GLU ARG LEU VAL ILE GLN SER TYR PHE
SEQRES 7 A 153 VAL GLN THR LEU LYS ILE GLU LYS SER THR SER LYS GLU
SEQRES 8 A 153 PRO VAL ASP PHE GLU GLN TRP ILE GLU LYS ASP LEU VAL
SEQRES 9 A 153 HIS THR GLU GLY GLN LEU GLN ASN GLU GLU ILE VAL ALA
SEQRES 10 A 153 HIS GLY SER ALA THR TYR LEU ARG PHE ILE ILE VAL SER
SEQRES 11 A 153 ALA PHE ASP HIS PHE ALA SER VAL HIS SER VAL SER ALA
SEQRES 12 A 153 GLU GLY THR VAL VAL SER ASN LEU SER SER
HELIX 1 1 LEU A 8 GLY A 12 5 5
HELIX 2 2 PRO A 26 ILE A 30 5 5
SHEET 1 A 4 ILE A 4 ASP A 5 0
SHEET 2 A 4 SER A 127 SER A 139 -1 O GLY A 135 N ILE A 4
SHEET 3 A 4 GLN A 47 TYR A 67 -1 N GLN A 65 O SER A 130
SHEET 4 A 4 GLU A 14 ILE A 16 -1 N ILE A 16 O ILE A 50
SHEET 1 B 4 TRP A 39 THR A 40 0
SHEET 2 B 4 SER A 127 SER A 139 -1 O VAL A 128 N TRP A 39
SHEET 3 B 4 GLN A 47 TYR A 67 -1 N GLN A 65 O SER A 130
SHEET 4 B 4 GLN A 101 ILE A 105 -1 O GLU A 103 N ILE A 64
SHEET 1 C 6 ILE A 4 ASP A 5 0
SHEET 2 C 6 SER A 127 SER A 139 -1 O GLY A 135 N ILE A 4
SHEET 3 C 6 GLN A 47 TYR A 67 -1 N GLN A 65 O SER A 130
SHEET 4 C 6 GLY A 109 ILE A 118 -1 O ILE A 118 N GLN A 47
SHEET 5 C 6 THR A 71 SER A 77 -1 N SER A 77 O THR A 112
SHEET 6 C 6 GLU A 86 ASP A 92 -1 O GLU A 86 N LYS A 76
CISPEP 1 PHE A 45 PRO A 46 1 -1.77
CISPEP 2 PHE A 45 PRO A 46 2 -1.61
CISPEP 3 PHE A 45 PRO A 46 3 -0.22
CISPEP 4 PHE A 45 PRO A 46 4 -1.73
CISPEP 5 PHE A 45 PRO A 46 5 -1.87
CISPEP 6 PHE A 45 PRO A 46 6 -2.13
CISPEP 7 PHE A 45 PRO A 46 7 -3.34
CISPEP 8 PHE A 45 PRO A 46 8 -1.00
CISPEP 9 PHE A 45 PRO A 46 9 -0.59
CISPEP 10 PHE A 45 PRO A 46 10 -1.82
CISPEP 11 PHE A 45 PRO A 46 11 -0.40
CISPEP 12 PHE A 45 PRO A 46 12 -0.17
CISPEP 13 PHE A 45 PRO A 46 13 -0.31
CISPEP 14 PHE A 45 PRO A 46 14 -2.74
CISPEP 15 PHE A 45 PRO A 46 15 -1.41
CISPEP 16 PHE A 45 PRO A 46 16 -0.09
CISPEP 17 PHE A 45 PRO A 46 17 0.86
CISPEP 18 PHE A 45 PRO A 46 18 -0.77
CISPEP 19 PHE A 45 PRO A 46 19 1.20
CISPEP 20 PHE A 45 PRO A 46 20 -1.28
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 2 2 Bytes