Header list of 1xc0.pdb file
Complete list - 2 20 Bytes
HEADER SIGNALING PROTEIN 31-AUG-04 1XC0
TITLE TWENTY LOWEST ENERGY STRUCTURES OF PA4 BY SOLUTION NMR
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: PARDAXIN P-4;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: PA4;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES;
SOURCE 3 OTHER_DETAILS: PARDAXINS NATURALLY OCCUR IN SOLE FISH OF GENUS
SOURCE 4 PARDACHIRUS. PA4 WAS SYNTHESIZED USING STANDARD 9-
SOURCE 5 FLUORENYLMETHOXYCARBONYL-BASED SOLID-PAHSE METHODS WITH AN ABI 431A
SOURCE 6 PEPTIDE SYNTHESIZER. CRUDE PEPTIDE WAS PURIFIED BY REVERSED-PHASE
SOURCE 7 HPLC
KEYWDS BEND-HELIX-BEND-HELIX MOTIF, SIGNALING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR F.PORCELLI,B.BUCK,D.-K.LEE,K.J.HALLOCK,A.RAMAMOORTHY,G.VEGLIA
REVDAT 4 02-MAR-22 1XC0 1 REMARK
REVDAT 3 24-FEB-09 1XC0 1 VERSN
REVDAT 2 26-APR-05 1XC0 1 JRNL
REVDAT 1 28-SEP-04 1XC0 0
JRNL AUTH F.PORCELLI,B.BUCK,D.-K.LEE,K.J.HALLOCK,A.RAMAMOORTHY,
JRNL AUTH 2 G.VEGLIA
JRNL TITL STRUCTURE AND ORIENTATION OF PARDAXIN DETERMINED BY NMR
JRNL TITL 2 EXPERIMENTS IN MODEL MEMBRANES
JRNL REF J.BIOL.CHEM. V. 279 45815 2004
JRNL REFN ISSN 0021-9258
JRNL PMID 15292173
JRNL DOI 10.1074/JBC.M405454200
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : VNMR 6.1, X-PLOR 3.851
REMARK 3 AUTHORS : VARIAN (VNMR), BRUNGER (X-PLOR)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: 335 NOES; 13 H-BONDS
REMARK 4
REMARK 4 1XC0 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-SEP-04.
REMARK 100 THE DEPOSITION ID IS D_1000030186.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 303
REMARK 210 PH : 4.5
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : NULL
REMARK 210 SAMPLE CONTENTS : ~1.5 MG OF LYOPHILIZED PA4 IN 20
REMARK 210 MM PBS (PH 6.5),300 MM D31-DPC
REMARK 210 AND 10% D2O. SAMPLE PH WAS
REMARK 210 ADJUSTED TO ~4.5 WITH NAOH.
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D TOCSY; 2D NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ
REMARK 210 SPECTROMETER MODEL : INOVA
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRPIPE 2006, SPARKY 3.110, X
REMARK 210 -PLOR 3.851
REMARK 210 METHOD USED : EXTENDED STRUCTURE; RANDOM
REMARK 210 SIMULATED ANNEALING; MOLECULAR
REMARK 210 DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 350
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST
REMARK 210 ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 HZ3 LYS A 16 OG1 THR A 17 1.37
REMARK 500 O LYS A 16 HG SER A 20 1.45
REMARK 500 O LEU A 19 H GLY A 23 1.46
REMARK 500 O ALA A 25 HG SER A 29 1.47
REMARK 500 O LEU A 5 H LYS A 8 1.48
REMARK 500 O ALA A 4 HZ3 LYS A 8 1.51
REMARK 500 O PHE A 15 H LEU A 19 1.52
REMARK 500 O SER A 20 HG SER A 24 1.59
REMARK 500 O VAL A 22 H LEU A 26 1.60
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 PHE A 2 -59.48 -160.31
REMARK 500 1 PHE A 3 -38.58 -147.23
REMARK 500 1 ALA A 4 -48.18 -173.13
REMARK 500 1 LEU A 14 -59.17 -158.64
REMARK 500 2 PHE A 2 -61.18 -150.92
REMARK 500 2 PHE A 3 -38.19 -145.71
REMARK 500 2 ALA A 4 -44.59 -173.73
REMARK 500 2 LEU A 14 -60.19 -161.68
REMARK 500 3 PHE A 2 -60.65 -156.47
REMARK 500 3 PHE A 3 -39.05 -146.65
REMARK 500 3 ALA A 4 -55.49 -173.56
REMARK 500 3 PRO A 13 30.38 -82.81
REMARK 500 3 LEU A 14 -60.72 -162.34
REMARK 500 3 SER A 28 -66.62 -109.17
REMARK 500 4 PHE A 2 -59.95 -158.55
REMARK 500 4 PHE A 3 -38.92 -146.76
REMARK 500 4 ALA A 4 -54.75 -173.26
REMARK 500 4 PRO A 13 37.36 -84.31
REMARK 500 4 LEU A 14 -58.84 -168.53
REMARK 500 4 SER A 28 -62.56 -91.69
REMARK 500 4 GLN A 32 140.23 76.71
REMARK 500 5 PHE A 2 -60.12 -157.77
REMARK 500 5 PHE A 3 -38.80 -147.28
REMARK 500 5 ALA A 4 -48.19 -172.75
REMARK 500 5 LEU A 14 -59.71 -158.65
REMARK 500 6 PHE A 2 -59.49 -160.05
REMARK 500 6 PHE A 3 -38.81 -147.02
REMARK 500 6 ALA A 4 -47.67 -172.99
REMARK 500 6 LEU A 14 -58.13 -157.79
REMARK 500 6 SER A 28 40.57 -93.54
REMARK 500 6 SER A 29 -70.81 -102.22
REMARK 500 7 PHE A 2 -59.93 -158.21
REMARK 500 7 PHE A 3 -39.16 -147.41
REMARK 500 7 ALA A 4 -47.66 -172.47
REMARK 500 7 LEU A 14 -61.25 -158.82
REMARK 500 7 SER A 29 -48.39 -139.14
REMARK 500 8 PHE A 2 -59.82 -158.00
REMARK 500 8 PHE A 3 -39.52 -145.98
REMARK 500 8 ALA A 4 -54.25 -172.41
REMARK 500 8 LEU A 14 -59.88 -153.62
REMARK 500 9 PHE A 2 -59.14 -160.74
REMARK 500 9 PHE A 3 -39.04 -146.45
REMARK 500 9 ALA A 4 -54.46 -173.11
REMARK 500 9 LEU A 14 -59.23 -151.46
REMARK 500 9 GLN A 32 -51.59 -166.96
REMARK 500 10 PHE A 2 -59.61 -159.63
REMARK 500 10 PHE A 3 -39.14 -146.89
REMARK 500 10 ALA A 4 -48.08 -172.50
REMARK 500 10 PRO A 13 35.85 -83.64
REMARK 500 10 LEU A 14 -58.95 -167.52
REMARK 500
REMARK 500 THIS ENTRY HAS 100 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
DBREF 1XC0 A 1 33 UNP P81861 PAP4_PARMA 1 33
SEQRES 1 A 33 GLY PHE PHE ALA LEU ILE PRO LYS ILE ILE SER SER PRO
SEQRES 2 A 33 LEU PHE LYS THR LEU LEU SER ALA VAL GLY SER ALA LEU
SEQRES 3 A 33 SER SER SER GLY GLY GLN GLU
HELIX 1 1 LEU A 5 ILE A 10 1 6
HELIX 2 2 LEU A 14 LEU A 26 1 13
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - 2 20 Bytes