Header list of 1x9a.pdb file
Complete list - r 2 2 Bytes
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 20-AUG-04 1X9A
TITLE SOLUTION NMR STRUCTURE OF PROTEIN TM0979 FROM THERMOTOGA MARITIMA.
TITLE 2 ONTARIO CENTER FOR STRUCTURAL PROTEOMICS TARGET TM0979_1_87;
TITLE 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET VT98.
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN TM0979;
COMPND 3 CHAIN: A, B
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA;
SOURCE 3 ORGANISM_TAXID: 2336
KEYWDS STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, PSI, NORTHEAST
KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM, NESG, OCSP, HYPOTHETICAL PROTEIN,
KEYWDS 3 BETA-ALPHA PROTEIN, DIMER, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 10
AUTHOR J.A.GASPAR,C.LIU,K.A.VASSALL,P.B.STATHOPULOS,G.MEGLEI,R.STEPHEN,
AUTHOR 2 A.PINEDA-LUCENA,B.WU,A.YEE,C.H.ARROWSMITH,E.M.MEIERING,NORTHEAST
AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (NESG)
REVDAT 4 02-MAR-22 1X9A 1 REMARK SEQADV
REVDAT 3 24-FEB-09 1X9A 1 VERSN
REVDAT 2 25-JAN-05 1X9A 1 JRNL
REVDAT 1 07-DEC-04 1X9A 0
JRNL AUTH J.A.GASPAR,C.LIU,K.A.VASSALL,G.MEGLEI,R.STEPHEN,
JRNL AUTH 2 P.B.STATHOPULOS,A.PINEDA-LUCENA,B.WU,A.YEE,C.H.ARROWSMITH,
JRNL AUTH 3 E.M.MEIERING
JRNL TITL A NOVEL MEMBER OF THE YCHN-LIKE FOLD: SOLUTION STRUCTURE OF
JRNL TITL 2 THE HYPOTHETICAL PROTEIN TM0979 FROM THERMOTOGA MARITIMA.
JRNL REF PROTEIN SCI. V. 14 216 2005
JRNL REFN ISSN 0961-8368
JRNL PMID 15608123
JRNL DOI 10.1110/PS.041068605
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : DYANA, CNS
REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE
REMARK 3 -KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE,
REMARK 3 SIMONSON,WARREN (CNS)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1X9A COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-AUG-04.
REMARK 100 THE DEPOSITION ID IS D_1000030100.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 300
REMARK 210 PH : 6.5
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 1MM 15N, 13C PROTEIN, 25MM
REMARK 210 SODIUM PHOSPHATE PH 6.5, 450MM
REMARK 210 NACL, 0.01% SODIUM AZIDE, 5% D2O
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL
REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ
REMARK 210 SPECTROMETER MODEL : AVANCE
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NULL
REMARK 210 METHOD USED : DISTANCE GEOMETRY, SIMULATED
REMARK 210 ANNEALING, MOLECULAR DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 20
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST
REMARK 210 RESTRAINT VIOLATIONS
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 9
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465 MODELS 1-10
REMARK 465 RES C SSSEQI
REMARK 465 MET A -19
REMARK 465 GLY A -18
REMARK 465 SER A -17
REMARK 465 SER A -16
REMARK 465 HIS A -15
REMARK 465 HIS A -14
REMARK 465 HIS A -13
REMARK 465 HIS A -12
REMARK 465 HIS A -11
REMARK 465 HIS A -10
REMARK 465 SER A -9
REMARK 465 SER A -8
REMARK 465 GLY A -7
REMARK 465 LEU A -6
REMARK 465 VAL A -5
REMARK 465 PRO A -4
REMARK 465 ARG A -3
REMARK 465 GLY A -2
REMARK 465 SER A -1
REMARK 465 HIS A 0
REMARK 465 MET B 181
REMARK 465 GLY B 182
REMARK 465 SER B 183
REMARK 465 SER B 184
REMARK 465 HIS B 185
REMARK 465 HIS B 186
REMARK 465 HIS B 187
REMARK 465 HIS B 188
REMARK 465 HIS B 189
REMARK 465 HIS B 190
REMARK 465 SER B 191
REMARK 465 SER B 192
REMARK 465 GLY B 193
REMARK 465 LEU B 194
REMARK 465 VAL B 195
REMARK 465 PRO B 196
REMARK 465 ARG B 197
REMARK 465 GLY B 198
REMARK 465 SER B 199
REMARK 465 HIS B 200
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 OE2 GLU A 41 HZ2 LYS A 66 1.56
REMARK 500 OE1 GLU A 80 HZ1 LYS A 84 1.58
REMARK 500 H MET B 201 OD1 ASP B 226 1.59
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 LYS A 7 62.98 -151.59
REMARK 500 1 TYR A 8 39.77 -148.73
REMARK 500 1 GLN A 32 -125.84 67.30
REMARK 500 1 GLU A 82 -33.94 171.73
REMARK 500 1 LYS A 84 91.51 34.09
REMARK 500 1 PHE A 85 70.52 -102.14
REMARK 500 1 THR B 210 -49.13 64.20
REMARK 500 1 GLN B 232 -118.97 66.44
REMARK 500 1 LEU B 242 103.77 61.50
REMARK 500 1 ASP B 264 51.27 -90.47
REMARK 500 1 GLU B 282 -90.62 -100.40
REMARK 500 1 GLU B 283 -46.30 -169.52
REMARK 500 1 LYS B 284 -140.62 51.19
REMARK 500 2 HIS A 12 86.66 -164.11
REMARK 500 2 GLN A 32 -114.18 64.37
REMARK 500 2 GLU A 41 30.46 -81.97
REMARK 500 2 GLU A 82 -63.68 174.82
REMARK 500 2 LYS A 84 167.78 57.46
REMARK 500 2 TYR B 208 -78.57 -124.13
REMARK 500 2 ASP B 211 -65.01 -98.14
REMARK 500 2 PRO B 213 -19.46 -47.99
REMARK 500 2 GLN B 232 -102.45 59.11
REMARK 500 2 LEU B 242 107.73 65.38
REMARK 500 2 GLU B 283 -32.49 -172.73
REMARK 500 2 ILE B 286 118.86 71.68
REMARK 500 3 ALA A 2 -67.37 176.62
REMARK 500 3 LYS A 7 61.56 -150.56
REMARK 500 3 GLN A 32 -136.40 67.13
REMARK 500 3 GLU A 40 -80.14 -79.95
REMARK 500 3 GLU A 41 -26.21 166.40
REMARK 500 3 LEU A 42 120.56 -37.72
REMARK 500 3 TYR A 60 -165.68 -77.46
REMARK 500 3 GLU A 82 -64.26 73.33
REMARK 500 3 LYS A 84 149.53 70.42
REMARK 500 3 ILE A 86 89.02 -68.27
REMARK 500 3 LYS B 223 -168.80 -109.98
REMARK 500 3 GLN B 232 -109.73 58.65
REMARK 500 3 GLU B 241 -73.56 -60.25
REMARK 500 3 LEU B 242 78.23 50.55
REMARK 500 3 GLU B 283 -38.40 -155.68
REMARK 500 4 ALA A 2 -66.84 -148.37
REMARK 500 4 GLN A 32 -117.87 68.48
REMARK 500 4 GLU A 82 -41.79 70.19
REMARK 500 4 LYS A 84 101.86 44.51
REMARK 500 4 TYR B 208 -55.56 -145.72
REMARK 500 4 THR B 210 14.99 56.74
REMARK 500 4 SER B 221 76.97 -113.08
REMARK 500 4 GLN B 232 -129.66 64.43
REMARK 500 4 GLU B 240 -86.09 -72.36
REMARK 500 4 GLU B 241 -74.69 177.45
REMARK 500
REMARK 500 THIS ENTRY HAS 125 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: VT98 RELATED DB: TARGETDB
DBREF 1X9A A 1 87 UNP Q9X074 Q9X074_THEMA 1 87
DBREF 1X9A B 201 287 UNP Q9X074 Q9X074_THEMA 1 87
SEQADV 1X9A MET A -19 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A GLY A -18 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A SER A -17 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A SER A -16 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A HIS A -15 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A HIS A -14 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A HIS A -13 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A HIS A -12 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A HIS A -11 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A HIS A -10 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A SER A -9 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A SER A -8 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A GLY A -7 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A LEU A -6 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A VAL A -5 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A PRO A -4 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A ARG A -3 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A GLY A -2 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A SER A -1 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A HIS A 0 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A MET B 181 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A GLY B 182 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A SER B 183 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A SER B 184 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A HIS B 185 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A HIS B 186 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A HIS B 187 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A HIS B 188 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A HIS B 189 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A HIS B 190 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A SER B 191 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A SER B 192 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A GLY B 193 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A LEU B 194 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A VAL B 195 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A PRO B 196 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A ARG B 197 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A GLY B 198 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A SER B 199 UNP Q9X074 EXPRESSION TAG
SEQADV 1X9A HIS B 200 UNP Q9X074 EXPRESSION TAG
SEQRES 1 A 107 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY
SEQRES 2 A 107 LEU VAL PRO ARG GLY SER HIS MET ALA LEU VAL LEU VAL
SEQRES 3 A 107 LYS TYR GLY THR ASP HIS PRO VAL GLU LYS LEU LYS ILE
SEQRES 4 A 107 ARG SER ALA LYS ALA GLU ASP LYS ILE VAL LEU ILE GLN
SEQRES 5 A 107 ASN GLY VAL PHE TRP ALA LEU GLU GLU LEU GLU THR PRO
SEQRES 6 A 107 ALA LYS VAL TYR ALA ILE LYS ASP ASP PHE LEU ALA ARG
SEQRES 7 A 107 GLY TYR SER GLU GLU ASP SER LYS VAL PRO LEU ILE THR
SEQRES 8 A 107 TYR SER GLU PHE ILE ASP LEU LEU GLU GLY GLU GLU LYS
SEQRES 9 A 107 PHE ILE GLY
SEQRES 1 B 107 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY
SEQRES 2 B 107 LEU VAL PRO ARG GLY SER HIS MET ALA LEU VAL LEU VAL
SEQRES 3 B 107 LYS TYR GLY THR ASP HIS PRO VAL GLU LYS LEU LYS ILE
SEQRES 4 B 107 ARG SER ALA LYS ALA GLU ASP LYS ILE VAL LEU ILE GLN
SEQRES 5 B 107 ASN GLY VAL PHE TRP ALA LEU GLU GLU LEU GLU THR PRO
SEQRES 6 B 107 ALA LYS VAL TYR ALA ILE LYS ASP ASP PHE LEU ALA ARG
SEQRES 7 B 107 GLY TYR SER GLU GLU ASP SER LYS VAL PRO LEU ILE THR
SEQRES 8 B 107 TYR SER GLU PHE ILE ASP LEU LEU GLU GLY GLU GLU LYS
SEQRES 9 B 107 PHE ILE GLY
HELIX 1 1 PRO A 13 SER A 21 1 9
HELIX 2 2 GLN A 32 GLU A 40 5 9
HELIX 3 3 LYS A 52 ARG A 58 1 7
HELIX 4 4 SER A 61 SER A 65 5 5
HELIX 5 5 THR A 71 GLY A 81 1 11
HELIX 6 6 VAL B 214 ALA B 222 1 9
HELIX 7 7 GLN B 232 GLU B 240 5 9
HELIX 8 8 LYS B 252 ARG B 258 1 7
HELIX 9 9 THR B 271 GLY B 281 1 11
SHEET 1 A 4 LEU A 3 VAL A 6 0
SHEET 2 A 4 LYS A 27 LEU A 30 1 O LYS A 27 N VAL A 4
SHEET 3 A 4 LYS A 47 ILE A 51 1 O LYS A 47 N ILE A 28
SHEET 4 A 4 LEU A 69 ILE A 70 1 O ILE A 70 N ALA A 50
SHEET 1 B 4 LEU B 203 VAL B 206 0
SHEET 2 B 4 LYS B 227 LEU B 230 1 O LYS B 227 N VAL B 204
SHEET 3 B 4 LYS B 247 ILE B 251 1 O LYS B 247 N ILE B 228
SHEET 4 B 4 LEU B 269 ILE B 270 1 O ILE B 270 N ALA B 250
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 2 2 Bytes