Header list of 1x6w.pdb file
Complete list - 2 202 Bytes
HEADER DNA 12-AUG-04 1X6W
TITLE SOLUTION STRUCTURE OF THE DNA DUPLEX TGCGCA:TGCGCA CAPPED BY
TITLE 2 TRIMETHOXYSTILBENE RESIDUES
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: 5'-D(*(TMS)P*TP*GP*CP*GP*CP*A)-3';
COMPND 3 CHAIN: A, B;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES
KEYWDS DNA, TRIMETHOXYSTILBENE, SYNTHETIC HYBRID
EXPDTA SOLUTION NMR
NUMMDL 2
MDLTYP MINIMIZED AVERAGE
AUTHOR J.TUMA,R.PAULINI,J.STTZ,C.RICHERT
REVDAT 3 02-MAR-22 1X6W 1 REMARK LINK
REVDAT 2 24-FEB-09 1X6W 1 VERSN
REVDAT 1 05-OCT-04 1X6W 0
JRNL AUTH J.TUMA,R.PAULINI,J.A.ROJAS STUTZ,C.RICHERT
JRNL TITL HOW MUCH PI-STACKING DO DNA TERMINI SEEK? SOLUTION STRUCTURE
JRNL TITL 2 OF A SELF-COMPLEMENTARY DNA HEXAMER WITH TRIMETHOXYSTILBENES
JRNL TITL 3 CAPPING THE TERMINAL BASE PAIRS.
JRNL REF BIOCHEMISTRY V. 43 15680 2004
JRNL REFN ISSN 0006-2960
JRNL PMID 15595824
JRNL DOI 10.1021/BI048205Y
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : CNS 1.0, CNS 1.0
REMARK 3 AUTHORS : BRUNGER (CNS), BRUNGER (CNS)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1X6W COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-AUG-04.
REMARK 100 THE DEPOSITION ID IS D_1000030014.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 288; 288
REMARK 210 PH : 7; 7
REMARK 210 IONIC STRENGTH : 165 MM PHOSPHAT BUFFER
REMARK 210 (KH2PO4/K2HPO4), NACL AT PH 7
REMARK 210 (UNCORRECTED FOR DEUTERIUM
REMARK 210 EFFECT); 165 MM PHOSPHAT BUFFER
REMARK 210 (KH2PO4/K2HPO4), NACL AT PH 7
REMARK 210 (UNCORRECTED FOR DEUTERIUM
REMARK 210 EFFECT)
REMARK 210 PRESSURE : AMBIENT; AMBIENT
REMARK 210 SAMPLE CONTENTS : ANALYTE BUFFER, SALT, D2O;
REMARK 210 ANALYTE BUFFER, SALT, H2O/D2O
REMARK 210 (85:15)
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, DQF-COSY, TOCSY
REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ
REMARK 210 SPECTROMETER MODEL : DRX
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NULL
REMARK 210 METHOD USED : TORSION-ANGLE MOLECULAR DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 2
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST
REMARK 210 ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
DBREF 1X6W A 1 7 PDB 1X6W 1X6W 1 7
DBREF 1X6W B 1 7 PDB 1X6W 1X6W 1 7
SEQRES 1 A 7 TMS DT DG DC DG DC DA
SEQRES 1 B 7 TMS DT DG DC DG DC DA
HET TMS A 1 51
HET TMS B 1 51
HETNAM TMS N-PROPYL-4-[(E)-2-(3,4,5-TRIMETHOXY-PHENYL)-VINYL]-
HETNAM 2 TMS BENZAMIDE
FORMUL 1 TMS 2(C21 H25 N O5)
LINK O2 TMS A 1 P DT A 2 1555 1555 1.49
LINK O2 TMS B 1 P DT B 2 1555 1555 1.49
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - 2 202 Bytes