Header list of 1wqu.pdb file
Complete list - r 2 2 Bytes
HEADER TRANSFERASE 02-OCT-04 1WQU
TITLE SOLUTION STRUCTURE OF THE HUMAN FES SH2 DOMAIN
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: PROTO-ONCOGENE TYROSINE-PROTEIN KINASE FES/FPS;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: SH2 DOMAIN;
COMPND 5 SYNONYM: C-FES;
COMPND 6 EC: 2.7.1.112;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 6 EXPRESSION_SYSTEM_PLASMID: P040524-01;
SOURCE 7 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS SH2 DOMAIN, FES, FELINE SARCOMA ONCOGENE, STRUCTURAL GENOMICS, RIKEN
KEYWDS 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, TRANSFERASE
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR A.SCOTT,D.PANTOJA-UCEDA,S.KOSHIBA,M.INOUE,T.KIGAWA,T.TERADA,
AUTHOR 2 M.SHIROUZU,A.TANAKA,S.SUGANO,S.YOKOYAMA,P.GUNTERT,RIKEN STRUCTURAL
AUTHOR 3 GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 3 02-MAR-22 1WQU 1 REMARK SEQADV
REVDAT 2 24-FEB-09 1WQU 1 VERSN
REVDAT 1 14-JUN-05 1WQU 0
JRNL AUTH A.SCOTT,D.PANTOJA-UCEDA,S.KOSHIBA,M.INOUE,T.KIGAWA,T.TERADA,
JRNL AUTH 2 M.SHIROUZU,A.TANAKA,S.SUGANO,S.YOKOYAMA,P.GUNTERT
JRNL TITL SOLUTION STRUCTURE OF THE SRC HOMOLOGY 2 DOMAIN FROM THE
JRNL TITL 2 HUMAN FELINE SARCOMA ONCOGENE FES
JRNL REF J.BIOMOL.NMR V. 31 357 2005
JRNL REFN ISSN 0925-2738
JRNL PMID 15929003
JRNL DOI 10.1007/S10858-005-0946-6
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH A.SCOTT,D.PANTOJA-UCEDA,S.KOSHIBA,M.INOUE,T.KIGAWA,T.TERADA,
REMARK 1 AUTH 2 M.SHIROUZU,A.TANAKA,S.SUGANO,S.YOKOYAMA,P.GUNTERT
REMARK 1 TITL NMR ASSIGNMENT OF THE SH2 DOMAIN FROM THE HUMAN FELINE
REMARK 1 TITL 2 SARCOMA ONCOGENE FES
REMARK 1 REF TO BE PUBLISHED
REMARK 1 REFN
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : NMRPIPE 2.1, OPALP 1.3
REMARK 3 AUTHORS : DELAGLIO, F. (NMRPIPE), KORADI, R., BILLETER, M.,
REMARK 3 GUNTERT, P. (OPALP)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1WQU COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-OCT-04.
REMARK 100 THE DEPOSITION ID IS D_1000023891.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 7.0
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 1.2MM UNIFORMLY 13C AND 15N
REMARK 210 LABELED PROTEIN; 20MM TRIS-HCL
REMARK 210 BUFFER; 100MM NACL; 1MM
REMARK 210 DITHIOTHREITOL; 0.02% NAN3
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N
REMARK 210 -SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ
REMARK 210 SPECTROMETER MODEL : DRX; AVANCE
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRVIEW 5.0.4, CYANA 2.0.32
REMARK 210 METHOD USED : AUTOMATED NOESY ASSIGNMENT,
REMARK 210 TORSION ANGLE DYNAMICS, ENERGY
REMARK 210 MINIMIZATION
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST
REMARK 210 RESTRAINT VIOLATIONS
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 4 ARG A 72 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 ALA A 22 26.89 -74.92
REMARK 500 1 ASP A 56 8.02 56.07
REMARK 500 1 LEU A 67 -61.05 -153.89
REMARK 500 1 ASP A 68 30.65 -78.23
REMARK 500 1 LEU A 73 -33.13 -142.71
REMARK 500 1 GLU A 74 -31.20 -156.93
REMARK 500 1 SER A 99 -39.44 -134.53
REMARK 500 2 VAL A 33 -31.59 -131.12
REMARK 500 2 GLN A 47 37.41 -75.97
REMARK 500 2 ILE A 63 97.02 -67.98
REMARK 500 2 ILE A 64 108.68 -56.38
REMARK 500 2 GLU A 74 -56.48 -155.57
REMARK 500 3 HIS A 14 0.53 -65.60
REMARK 500 3 ALA A 22 25.30 -76.75
REMARK 500 3 GLN A 47 12.70 57.85
REMARK 500 3 ASP A 56 18.72 49.24
REMARK 500 3 ASN A 69 -5.03 70.73
REMARK 500 3 LEU A 73 -36.28 -131.27
REMARK 500 3 GLU A 74 -20.35 -159.69
REMARK 500 4 LEU A 73 -49.39 -142.80
REMARK 500 5 ALA A 22 43.03 -71.82
REMARK 500 5 TRP A 55 -85.89 -152.56
REMARK 500 5 ASP A 56 23.85 -79.24
REMARK 500 5 PRO A 59 92.66 -68.62
REMARK 500 5 LEU A 67 -81.06 -130.09
REMARK 500 5 ASP A 68 37.69 -75.73
REMARK 500 6 SER A 3 -151.60 -108.46
REMARK 500 6 ALA A 22 18.91 38.89
REMARK 500 6 ASP A 56 2.00 55.70
REMARK 500 6 ASP A 68 22.96 49.95
REMARK 500 6 LEU A 73 -78.70 -125.26
REMARK 500 6 THR A 96 141.89 -177.53
REMARK 500 7 VAL A 33 -35.88 -136.21
REMARK 500 7 GLN A 44 107.51 -41.77
REMARK 500 7 TRP A 55 -63.35 -149.20
REMARK 500 7 ASP A 56 42.53 -107.24
REMARK 500 7 LEU A 67 -5.09 -150.28
REMARK 500 7 LEU A 73 -32.59 -150.90
REMARK 500 7 GLU A 74 -71.81 -113.20
REMARK 500 7 SER A 113 102.72 -55.04
REMARK 500 8 SER A 3 -169.58 -75.45
REMARK 500 8 ALA A 22 26.68 -66.91
REMARK 500 8 ASP A 68 18.00 56.63
REMARK 500 8 ASN A 69 2.99 91.90
REMARK 500 8 LEU A 73 -83.90 -127.20
REMARK 500 8 PRO A 111 38.43 -68.26
REMARK 500 9 SER A 2 4.27 -61.04
REMARK 500 9 ALA A 22 11.40 46.66
REMARK 500 9 LYS A 46 24.23 -65.45
REMARK 500 9 TRP A 55 -97.88 -145.30
REMARK 500
REMARK 500 THIS ENTRY HAS 132 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 2 TYR A 19 0.08 SIDE CHAIN
REMARK 500 2 ARG A 72 0.09 SIDE CHAIN
REMARK 500 2 ARG A 105 0.09 SIDE CHAIN
REMARK 500 3 ARG A 72 0.12 SIDE CHAIN
REMARK 500 5 TYR A 19 0.09 SIDE CHAIN
REMARK 500 5 ARG A 60 0.09 SIDE CHAIN
REMARK 500 7 ARG A 105 0.08 SIDE CHAIN
REMARK 500 12 ARG A 41 0.08 SIDE CHAIN
REMARK 500 15 ARG A 25 0.09 SIDE CHAIN
REMARK 500 15 ARG A 105 0.10 SIDE CHAIN
REMARK 500 18 ARG A 41 0.09 SIDE CHAIN
REMARK 500 20 ARG A 41 0.09 SIDE CHAIN
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: HSS001002011.2 RELATED DB: TARGETDB
DBREF 1WQU A 8 108 UNP P07332 FES_HUMAN 450 550
SEQADV 1WQU GLY A 1 UNP P07332 CLONING ARTIFACT
SEQADV 1WQU SER A 2 UNP P07332 CLONING ARTIFACT
SEQADV 1WQU SER A 3 UNP P07332 CLONING ARTIFACT
SEQADV 1WQU GLY A 4 UNP P07332 CLONING ARTIFACT
SEQADV 1WQU SER A 5 UNP P07332 CLONING ARTIFACT
SEQADV 1WQU SER A 6 UNP P07332 CLONING ARTIFACT
SEQADV 1WQU GLY A 7 UNP P07332 CLONING ARTIFACT
SEQADV 1WQU SER A 109 UNP P07332 CLONING ARTIFACT
SEQADV 1WQU GLY A 110 UNP P07332 CLONING ARTIFACT
SEQADV 1WQU PRO A 111 UNP P07332 CLONING ARTIFACT
SEQADV 1WQU SER A 112 UNP P07332 CLONING ARTIFACT
SEQADV 1WQU SER A 113 UNP P07332 CLONING ARTIFACT
SEQADV 1WQU GLY A 114 UNP P07332 CLONING ARTIFACT
SEQRES 1 A 114 GLY SER SER GLY SER SER GLY GLU VAL GLN LYS PRO LEU
SEQRES 2 A 114 HIS GLU GLN LEU TRP TYR HIS GLY ALA ILE PRO ARG ALA
SEQRES 3 A 114 GLU VAL ALA GLU LEU LEU VAL HIS SER GLY ASP PHE LEU
SEQRES 4 A 114 VAL ARG GLU SER GLN GLY LYS GLN GLU TYR VAL LEU SER
SEQRES 5 A 114 VAL LEU TRP ASP GLY LEU PRO ARG HIS PHE ILE ILE GLN
SEQRES 6 A 114 SER LEU ASP ASN LEU TYR ARG LEU GLU GLY GLU GLY PHE
SEQRES 7 A 114 PRO SER ILE PRO LEU LEU ILE ASP HIS LEU LEU SER THR
SEQRES 8 A 114 GLN GLN PRO LEU THR LYS LYS SER GLY VAL VAL LEU HIS
SEQRES 9 A 114 ARG ALA VAL PRO SER GLY PRO SER SER GLY
HELIX 1 1 GLY A 7 LYS A 11 5 5
HELIX 2 2 PRO A 12 GLN A 16 5 5
HELIX 3 3 PRO A 24 GLU A 30 1 7
HELIX 4 4 SER A 80 GLN A 92 1 13
SHEET 1 A 4 TYR A 19 GLY A 21 0
SHEET 2 A 4 ASP A 37 GLU A 42 1 O GLU A 42 N GLY A 21
SHEET 3 A 4 TYR A 49 TRP A 55 -1 O SER A 52 N LEU A 39
SHEET 4 A 4 LEU A 58 ILE A 63 -1 O PHE A 62 N LEU A 51
SHEET 1 B 3 TYR A 19 GLY A 21 0
SHEET 2 B 3 ASP A 37 GLU A 42 1 O GLU A 42 N GLY A 21
SHEET 3 B 3 ARG A 105 ALA A 106 1 O ARG A 105 N PHE A 38
SHEET 1 C 2 GLN A 65 SER A 66 0
SHEET 2 C 2 TYR A 71 ARG A 72 -1 O ARG A 72 N GLN A 65
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 2 2 Bytes