Header list of 1wmt.pdb file
Complete list - r 2 2 Bytes
HEADER TOXIN 20-JUL-04 1WMT
TITLE SCORPION TOXIN (ISTX) FROM OPISTHACANTHUS MADAGASCARIENSIS
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: ISTX;
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES;
SOURCE 3 OTHER_DETAILS: THIS PEPTIDE WAS CHEMICALLY SYNTHESIZED. THE SEQUENCE
SOURCE 4 OF THIS PEPTIDE NATURALLY OCCURS IN OPISTHACANTHUS MADAGASCARIENSIS.
KEYWDS NEUROTOXIN, POTASSIUM CHANNEL BLOCKER, NMR SOLUTION STRUCTURE, ALPHA-
KEYWDS 2 K TOXIN FAMILY, SCORPION TOXIN, TOXIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR N.YAMAJI,L.DAI,K.SUGASE,M.ANDRIANTSIFERANA,T.NAKAJIMA,T.IWASHITA
REVDAT 3 02-MAR-22 1WMT 1 REMARK
REVDAT 2 24-FEB-09 1WMT 1 VERSN
REVDAT 1 19-OCT-04 1WMT 0
JRNL AUTH N.YAMAJI,L.DAI,K.SUGASE,M.ANDRIANTSIFERANA,T.NAKAJIMA,
JRNL AUTH 2 T.IWASHITA
JRNL TITL SOLUTION STRUCTURE OF ISTX: A MALE SCORPION TOXIN FROM
JRNL TITL 2 OPISTHACANTHUS MADAGASCARIENSIS (ISCHNURIDAE)
JRNL REF EUR.J.BIOCHEM. V. 271 3855 2004
JRNL REFN ISSN 0014-2956
JRNL PMID 15373831
JRNL DOI 10.1111/J.1432-1033.2004.04322.X
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : XPLOR-NIH 2.0.5, XPLOR-NIH 2.0.5
REMARK 3 AUTHORS : C.D.SCHWIETERS,J.J.KUSZEWSKI,N.TJANDRA,G.M.CLORE
REMARK 3 (XPLOR-NIH), C.D.SCHWIETERS,J.J.KUSZEWSKI,
REMARK 3 N.TJANDRA,G.M.CLORE (XPLOR-NIH)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: CONJUGATE GRADIENT MINIMIZATION
REMARK 4
REMARK 4 1WMT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-JUL-04.
REMARK 100 THE DEPOSITION ID IS D_1000023755.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 3.91
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : ATMOSPHERIC ATM
REMARK 210 SAMPLE CONTENTS : 4.7MM ISTX
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; 2D TOCSY; DQF-COSY;
REMARK 210 1H13C HSQC
REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ; 500 MHZ
REMARK 210 SPECTROMETER MODEL : DMX
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NULL
REMARK 210 METHOD USED : TARSION ANGLE DYNAMICS,
REMARK 210 SIMULATED ANNEALING
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST
REMARK 210 ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (RES=RESIDUE NAME;
REMARK 470 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 470 MODELS 1-20
REMARK 470 RES CSSEQI ATOMS
REMARK 470 VAL A 1 N
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 H1 VAL A 1 O CYS A 35 1.25
REMARK 500 O ASN A 30 HD1 HIS A 32 1.31
REMARK 500 OE1 GLU A 15 HZ1 LYS A 19 1.54
REMARK 500 O THR A 10 H ASP A 12 1.57
REMARK 500 O ASN A 30 ND1 HIS A 32 2.00
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 SER A 11 43.50 -67.71
REMARK 500 1 ASP A 12 -41.88 -163.07
REMARK 500 1 LYS A 20 -70.91 -91.33
REMARK 500 1 CYS A 23 -32.91 -138.25
REMARK 500 1 ALA A 24 -141.22 60.63
REMARK 500 1 ARG A 31 33.14 39.28
REMARK 500 2 CYS A 7 -164.06 -129.72
REMARK 500 2 ARG A 8 -42.60 -140.31
REMARK 500 2 SER A 11 48.86 -65.52
REMARK 500 2 ASP A 12 -41.24 -166.15
REMARK 500 2 LYS A 20 -75.01 -90.36
REMARK 500 2 CYS A 23 -36.69 -135.26
REMARK 500 2 ALA A 24 -148.18 61.31
REMARK 500 2 ARG A 25 36.47 39.90
REMARK 500 2 MET A 29 -148.31 -82.99
REMARK 500 2 ASN A 30 92.62 -52.95
REMARK 500 2 ARG A 31 34.51 35.17
REMARK 500 2 CYS A 35 -161.36 -114.39
REMARK 500 2 TYR A 36 -0.13 -146.96
REMARK 500 2 ASN A 37 10.88 48.06
REMARK 500 2 PRO A 40 -17.29 -42.01
REMARK 500 3 SER A 11 40.29 -64.55
REMARK 500 3 ASP A 12 -34.05 -166.22
REMARK 500 3 LYS A 20 -71.14 -92.70
REMARK 500 3 CYS A 23 -37.58 -136.19
REMARK 500 3 ALA A 24 -143.48 59.09
REMARK 500 4 SER A 11 41.04 -64.52
REMARK 500 4 ASP A 12 -40.02 -165.40
REMARK 500 4 LYS A 20 -72.84 -86.22
REMARK 500 4 ALA A 24 -137.32 -79.39
REMARK 500 4 ARG A 25 71.41 43.30
REMARK 500 4 ALA A 26 -167.09 -107.05
REMARK 500 4 ASN A 30 -139.08 49.39
REMARK 500 4 ARG A 31 36.17 -98.31
REMARK 500 4 TYR A 36 12.49 -143.39
REMARK 500 4 PRO A 40 -19.04 -41.90
REMARK 500 5 SER A 11 38.90 -63.02
REMARK 500 5 ASP A 12 -38.22 -166.52
REMARK 500 5 LYS A 20 -67.25 -90.59
REMARK 500 5 ALA A 24 -129.15 -87.00
REMARK 500 5 CYS A 35 -166.36 -101.82
REMARK 500 5 ASN A 38 56.28 -157.76
REMARK 500 5 PRO A 40 -10.34 -44.44
REMARK 500 6 ARG A 8 -40.77 -135.28
REMARK 500 6 SER A 11 36.66 -62.77
REMARK 500 6 ASP A 12 -40.03 -162.68
REMARK 500 6 LYS A 20 -72.49 -89.01
REMARK 500 6 ALA A 24 -141.43 -82.82
REMARK 500 6 TYR A 36 16.31 -145.94
REMARK 500 7 SER A 11 40.52 -63.81
REMARK 500
REMARK 500 THIS ENTRY HAS 161 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
DBREF 1WMT A 1 41 PDB 1WMT 1WMT 1 41
SEQRES 1 A 41 VAL HIS THR ASN ILE PRO CYS ARG GLY THR SER ASP CYS
SEQRES 2 A 41 TYR GLU PRO CYS GLU LYS LYS TYR ASN CYS ALA ARG ALA
SEQRES 3 A 41 LYS CYS MET ASN ARG HIS CYS ASN CYS TYR ASN ASN CYS
SEQRES 4 A 41 PRO TRP
HELIX 1 1 GLY A 9 LYS A 20 1 12
SHEET 1 A 3 HIS A 2 PRO A 6 0
SHEET 2 A 3 HIS A 32 ASN A 34 -1 O CYS A 33 N THR A 3
SHEET 3 A 3 LYS A 27 MET A 29 -1 N MET A 29 O HIS A 32
SSBOND 1 CYS A 7 CYS A 28 1555 1555 2.02
SSBOND 2 CYS A 13 CYS A 33 1555 1555 2.01
SSBOND 3 CYS A 17 CYS A 35 1555 1555 2.04
SSBOND 4 CYS A 23 CYS A 39 1555 1555 2.01
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 2 2 Bytes