Header list of 1wi5.pdb file
Complete list - r 2 2 Bytes
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-MAY-04 1WI5
TITLE SOLUTION STRUCTURE OF THE S1 RNA BINDING DOMAIN FROM HUMAN
TITLE 2 HYPOTHETICAL PROTEIN BAA11502
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: RRP5 PROTEIN HOMOLOG;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: S1 DOMAIN;
COMPND 5 SYNONYM: PROGRAMMED CELL DEATH PROTEIN 11;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: RIKEN CDNA HA02717;
SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P030512-28;
SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS S1 DOMAIN, OB-FOLD, STRUCTURAL GENOMICS, RIKEN STRUCTURAL
KEYWDS 2 GENOMICS/PROTEOMICS INITIATIVE, RSGI, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU,S.YOKOYAMA,RIKEN
AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 3 02-MAR-22 1WI5 1 REMARK SEQADV SHEET
REVDAT 2 24-FEB-09 1WI5 1 VERSN
REVDAT 1 28-NOV-04 1WI5 0
JRNL AUTH S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU,
JRNL AUTH 2 S.YOKOYAMA
JRNL TITL SOLUTION STRUCTURE OF THE S1 RNA BINDING DOMAIN FROM HUMAN
JRNL TITL 2 HYPOTHETICAL PROTEIN BAA11502
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17
REMARK 3 AUTHORS : BRUKER (XWINNMR), GUENTERT, P. (CYANA)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1WI5 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-JUN-04.
REMARK 100 THE DEPOSITION ID IS D_1000023604.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 6.0
REMARK 210 IONIC STRENGTH : 100MM
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 1.2MM 13C/15N-PROTEIN 20MM
REMARK 210 PHOSPHATE BUFFER NA; 100MM NACL;
REMARK 210 1MM D-DTT; 0.02% NAN3
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N
REMARK 210 -SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ
REMARK 210 SPECTROMETER MODEL : AVANCE
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRPIPE 2.3, NMRVIEW 5.0.4,
REMARK 210 KUJIRA 0.901, OLIVIA 1.9.12,
REMARK 210 CYANA 2.0.17
REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS,
REMARK 210 SIMULATED ANNEALING
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR
REMARK 210 SPECTROSCOPY.
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 LEU A 192 46.22 33.69
REMARK 500 1 LEU A 197 154.58 -47.99
REMARK 500 1 LYS A 240 -72.19 -99.14
REMARK 500 1 ASN A 241 35.85 -83.69
REMARK 500 1 LYS A 242 33.64 34.44
REMARK 500 1 ASN A 262 41.05 -88.13
REMARK 500 1 SER A 295 142.03 -173.43
REMARK 500 2 VAL A 191 47.96 -76.45
REMARK 500 2 LEU A 197 155.36 -40.05
REMARK 500 2 LYS A 240 -69.86 -101.31
REMARK 500 2 ASN A 241 32.80 -84.37
REMARK 500 2 LYS A 242 28.62 37.32
REMARK 500 2 LYS A 245 155.14 -46.77
REMARK 500 2 GLN A 283 97.28 -49.17
REMARK 500 2 GLN A 284 131.97 -173.61
REMARK 500 2 LEU A 288 -50.72 -134.78
REMARK 500 2 SER A 296 160.51 -44.57
REMARK 500 3 SER A 181 151.75 -49.60
REMARK 500 3 VAL A 191 53.57 34.04
REMARK 500 3 LEU A 197 160.53 -42.41
REMARK 500 3 ASN A 241 35.33 -83.58
REMARK 500 3 LYS A 242 33.09 34.21
REMARK 500 3 ASN A 262 40.06 -95.60
REMARK 500 3 SER A 292 108.48 -163.15
REMARK 500 4 SER A 181 154.24 -47.00
REMARK 500 4 ASN A 189 90.12 -55.12
REMARK 500 4 LEU A 192 45.36 34.59
REMARK 500 4 LYS A 240 -67.34 -100.17
REMARK 500 4 ASN A 241 32.81 -84.30
REMARK 500 4 LYS A 242 27.88 37.94
REMARK 500 4 SER A 273 119.82 -171.38
REMARK 500 4 ALA A 280 95.62 -58.05
REMARK 500 4 GLU A 282 178.32 -57.12
REMARK 500 4 SER A 285 171.10 -51.07
REMARK 500 4 TRP A 286 -179.75 -51.84
REMARK 500 5 SER A 180 78.34 -63.01
REMARK 500 5 SER A 183 172.87 -57.27
REMARK 500 5 LYS A 240 -68.96 -99.31
REMARK 500 5 ASN A 241 34.03 -84.06
REMARK 500 5 LYS A 242 34.20 34.73
REMARK 500 5 LYS A 245 135.76 -35.61
REMARK 500 5 LEU A 246 -175.71 -69.22
REMARK 500 5 ASN A 262 30.64 -85.85
REMARK 500 5 HIS A 272 37.05 -87.38
REMARK 500 5 VAL A 275 32.12 34.97
REMARK 500 5 GLN A 283 158.89 -47.06
REMARK 500 5 TRP A 286 68.26 -118.02
REMARK 500 5 PRO A 294 84.13 -69.75
REMARK 500 6 SER A 180 50.43 -90.33
REMARK 500 6 ASN A 189 100.53 -42.05
REMARK 500
REMARK 500 THIS ENTRY HAS 188 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 650
REMARK 650 HELIX
REMARK 650 AUTHOR DETERMIANTION METHOD: AUTHOR DETERMINED
REMARK 700
REMARK 700 SHEET
REMARK 700 AUTHOR DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: HSK002000182.1 RELATED DB: TARGETDB
DBREF 1WI5 A 186 291 UNP Q14690 RRP5_HUMAN 173 278
SEQADV 1WI5 GLY A 179 UNP Q14690 CLONING ARTIFACT
SEQADV 1WI5 SER A 180 UNP Q14690 CLONING ARTIFACT
SEQADV 1WI5 SER A 181 UNP Q14690 CLONING ARTIFACT
SEQADV 1WI5 GLY A 182 UNP Q14690 CLONING ARTIFACT
SEQADV 1WI5 SER A 183 UNP Q14690 CLONING ARTIFACT
SEQADV 1WI5 SER A 184 UNP Q14690 CLONING ARTIFACT
SEQADV 1WI5 GLY A 185 UNP Q14690 CLONING ARTIFACT
SEQADV 1WI5 SER A 292 UNP Q14690 CLONING ARTIFACT
SEQADV 1WI5 GLY A 293 UNP Q14690 CLONING ARTIFACT
SEQADV 1WI5 PRO A 294 UNP Q14690 CLONING ARTIFACT
SEQADV 1WI5 SER A 295 UNP Q14690 CLONING ARTIFACT
SEQADV 1WI5 SER A 296 UNP Q14690 CLONING ARTIFACT
SEQADV 1WI5 GLY A 297 UNP Q14690 CLONING ARTIFACT
SEQRES 1 A 119 GLY SER SER GLY SER SER GLY LYS ASN VAL ASN ARG VAL
SEQRES 2 A 119 LEU SER ALA GLU ALA LEU LYS PRO GLY MET LEU LEU THR
SEQRES 3 A 119 GLY THR VAL SER SER LEU GLU ASP HIS GLY TYR LEU VAL
SEQRES 4 A 119 ASP ILE GLY VAL ASP GLY THR ARG ALA PHE LEU PRO LEU
SEQRES 5 A 119 LEU LYS ALA GLN GLU TYR ILE ARG GLN LYS ASN LYS GLY
SEQRES 6 A 119 ALA LYS LEU LYS VAL GLY GLN TYR LEU ASN CYS ILE VAL
SEQRES 7 A 119 GLU LYS VAL LYS GLY ASN GLY GLY VAL VAL SER LEU SER
SEQRES 8 A 119 VAL GLY HIS SER GLU VAL SER THR ALA ILE ALA THR GLU
SEQRES 9 A 119 GLN GLN SER TRP ASN LEU ASN ASN LEU SER GLY PRO SER
SEQRES 10 A 119 SER GLY
HELIX 1 1 LEU A 230 GLN A 239 1 10
SHEET 1 A 5 LEU A 202 GLU A 211 0
SHEET 2 A 5 GLY A 214 ASP A 218 -1 O ASP A 218 N THR A 206
SHEET 3 A 5 ARG A 225 PRO A 229 -1 O LEU A 228 N TYR A 215
SHEET 4 A 5 GLN A 250 LYS A 260 -1 N GLU A 257 O SER A 267
SHEET 5 A 5 VAL A 265 SER A 269 1 O VAL A 266 N ARG A 225
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 2 2 Bytes