Header list of 1wfi.pdb file
Complete list - r 2 2 Bytes
HEADER TRANSPORT PROTEIN 26-MAY-04 1WFI TITLE NUCLEAR MOVE DOMAIN OF NUCLEAR DISTRIBUTION GENE C HOMOLOG COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR DISTRIBUTION GENE C HOMOLOG; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NUCLEAR MOVE DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: RIKEN CDNA 2700033I24; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P030908-69; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS NUDC, NUCLEAR DISTRIBUTION, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 2 INITIATIVE, RSGI, STRUCTURAL GENOMICS, TRANSPORT PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 3 02-MAR-22 1WFI 1 REMARK SEQADV REVDAT 2 24-FEB-09 1WFI 1 VERSN REVDAT 1 26-NOV-04 1WFI 0 JRNL AUTH T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA JRNL TITL NUCLEAR MOVE DOMAIN OF NUCLEAR DISTRIBUTION GENE C HOMOLOG JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 1.0.7 REMARK 3 AUTHORS : VARIAN (VNMR), GUENTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WFI COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-JUN-04. REMARK 100 THE DEPOSITION ID IS D_1000023521. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 4.5 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.08MM 13C/15N-LABELED PROTEIN; REMARK 210 20MM D-NAOAC, 100MM NACL, 1MM D- REMARK 210 DTT, 0.02% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.8992, CYANA 1.0.7 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 59 H THR A 97 1.52 REMARK 500 O SER A 70 H HIS A 82 1.52 REMARK 500 H ASP A 39 O ARG A 46 1.52 REMARK 500 H LEU A 19 O LEU A 83 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 92.62 59.56 REMARK 500 1 SER A 3 -55.15 -125.80 REMARK 500 1 SER A 6 158.35 69.16 REMARK 500 1 PRO A 8 -162.98 -75.06 REMARK 500 1 ASN A 9 -46.35 -136.99 REMARK 500 1 THR A 13 -147.56 -161.04 REMARK 500 1 GLN A 14 -171.96 177.13 REMARK 500 1 THR A 15 56.65 -161.40 REMARK 500 1 LEU A 16 30.83 38.71 REMARK 500 1 ALA A 17 -85.62 -160.27 REMARK 500 1 LYS A 34 -45.78 -143.15 REMARK 500 1 HIS A 44 128.49 -174.29 REMARK 500 1 ASP A 57 96.67 -174.51 REMARK 500 1 LYS A 65 105.72 -59.17 REMARK 500 1 LYS A 77 -54.59 -163.91 REMARK 500 1 MET A 89 45.46 -168.19 REMARK 500 1 ASP A 99 162.00 -45.87 REMARK 500 1 PRO A 100 -85.90 -74.96 REMARK 500 1 GLU A 101 -89.30 -143.68 REMARK 500 1 THR A 104 -170.28 47.46 REMARK 500 1 LYS A 106 167.39 -45.74 REMARK 500 1 ILE A 107 -85.02 -40.70 REMARK 500 1 GLU A 110 115.82 -178.23 REMARK 500 1 SER A 115 107.19 -43.64 REMARK 500 1 ASP A 116 82.73 -170.65 REMARK 500 1 SER A 119 125.73 176.67 REMARK 500 1 GLU A 120 -145.49 -126.78 REMARK 500 1 ARG A 122 117.90 173.64 REMARK 500 2 SER A 5 73.22 -154.06 REMARK 500 2 SER A 6 101.93 55.77 REMARK 500 2 PRO A 8 -162.55 -74.98 REMARK 500 2 ALA A 17 -53.46 -147.17 REMARK 500 2 ASP A 35 35.49 -91.21 REMARK 500 2 HIS A 44 137.17 -172.76 REMARK 500 2 ASP A 57 105.27 -172.31 REMARK 500 2 LYS A 65 103.60 -55.95 REMARK 500 2 ASP A 75 24.56 48.31 REMARK 500 2 LYS A 77 -46.95 -137.97 REMARK 500 2 LYS A 88 25.83 47.36 REMARK 500 2 ILE A 102 166.07 64.37 REMARK 500 2 LYS A 106 99.97 -51.38 REMARK 500 2 ILE A 107 -80.14 -33.27 REMARK 500 2 GLU A 110 109.76 70.36 REMARK 500 2 SER A 119 120.33 -174.56 REMARK 500 2 MET A 124 112.65 -179.22 REMARK 500 3 PRO A 8 -163.10 -75.05 REMARK 500 3 ASN A 9 -46.61 -153.08 REMARK 500 3 THR A 13 -165.18 -122.57 REMARK 500 3 GLN A 14 171.85 179.94 REMARK 500 3 THR A 15 41.26 -143.59 REMARK 500 REMARK 500 THIS ENTRY HAS 490 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT007103799.1 RELATED DB: TARGETDB DBREF 1WFI A 8 125 UNP O35685 NUDC_MOUSE 171 288 SEQADV 1WFI GLY A 1 UNP O35685 CLONING ARTIFACT SEQADV 1WFI SER A 2 UNP O35685 CLONING ARTIFACT SEQADV 1WFI SER A 3 UNP O35685 CLONING ARTIFACT SEQADV 1WFI GLY A 4 UNP O35685 CLONING ARTIFACT SEQADV 1WFI SER A 5 UNP O35685 CLONING ARTIFACT SEQADV 1WFI SER A 6 UNP O35685 CLONING ARTIFACT SEQADV 1WFI GLY A 7 UNP O35685 CLONING ARTIFACT SEQADV 1WFI SER A 126 UNP O35685 CLONING ARTIFACT SEQADV 1WFI GLY A 127 UNP O35685 CLONING ARTIFACT SEQADV 1WFI PRO A 128 UNP O35685 CLONING ARTIFACT SEQADV 1WFI SER A 129 UNP O35685 CLONING ARTIFACT SEQADV 1WFI SER A 130 UNP O35685 CLONING ARTIFACT SEQADV 1WFI GLY A 131 UNP O35685 CLONING ARTIFACT SEQRES 1 A 131 GLY SER SER GLY SER SER GLY PRO ASN TYR ARG TRP THR SEQRES 2 A 131 GLN THR LEU ALA GLU LEU ASP LEU ALA VAL PRO PHE ARG SEQRES 3 A 131 VAL SER PHE ARG LEU LYS GLY LYS ASP VAL VAL VAL ASP SEQRES 4 A 131 ILE GLN ARG ARG HIS LEU ARG VAL GLY LEU LYS GLY GLN SEQRES 5 A 131 PRO PRO VAL VAL ASP GLY GLU LEU TYR ASN GLU VAL LYS SEQRES 6 A 131 VAL GLU GLU SER SER TRP LEU ILE GLU ASP GLY LYS VAL SEQRES 7 A 131 VAL THR VAL HIS LEU GLU LYS ILE ASN LYS MET GLU TRP SEQRES 8 A 131 TRP ASN ARG LEU VAL THR SER ASP PRO GLU ILE ASN THR SEQRES 9 A 131 LYS LYS ILE ASN PRO GLU ASN SER LYS LEU SER ASP LEU SEQRES 10 A 131 ASP SER GLU THR ARG SER MET VAL SER GLY PRO SER SER SEQRES 11 A 131 GLY HELIX 1 1 ASP A 75 LYS A 77 5 3 SHEET 1 A 4 ARG A 11 GLN A 14 0 SHEET 2 A 4 GLU A 18 VAL A 23 -1 O ALA A 22 N ARG A 11 SHEET 3 A 4 VAL A 78 GLU A 84 -1 O LEU A 83 N LEU A 19 SHEET 4 A 4 SER A 70 GLU A 74 -1 N SER A 70 O HIS A 82 SHEET 1 B 2 VAL A 36 GLN A 41 0 SHEET 2 B 2 HIS A 44 LEU A 49 -1 O ARG A 46 N ASP A 39 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1
Complete list - r 2 2 Bytes