Header list of 1veh.pdb file
Complete list - r 2 2 Bytes
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 31-MAR-04 1VEH TITLE SOLUTION STRUCTURE OF RSGI RUH-018, A NIFU-LIKE DOMAIN OF HIRIP5 TITLE 2 PROTEIN FROM MOUSE CDNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: NIFU-LIKE PROTEIN HIRIP5; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NIFU-LIKE DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS SYSTEM KEYWDS NIFU-LIKE, STRUCTURAL GENOMICS, MOUSE CDNA, RIKEN STRUCTURAL KEYWDS 2 GENOMICS/PROTEOMICS INITIATIVE, RSGI, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR W.OHASHI,H.HIROTA,T.YAMAZAKI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 02-MAR-22 1VEH 1 REMARK SEQADV REVDAT 2 24-FEB-09 1VEH 1 VERSN REVDAT 1 30-SEP-04 1VEH 0 JRNL AUTH W.OHASHI,H.HIROTA,T.YAMAZAKI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RSGI RUH-018, A NIFU-LIKE DOMAIN OF JRNL TITL 2 HIRIP5 PROTEIN FROM MOUSE CDNA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 2.6, CYANA 1.0.7 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUENTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1VEH COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-APR-04. REMARK 100 THE DEPOSITION ID IS D_1000006527. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 100MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.2MM RSGI RUH-018 U-13C, 15N; REMARK 210 20MM PINA, 100MM NACL, 1MM DTT U- REMARK 210 2H; 90%H2O, 10%D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 2.1, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.8992, CYANA 1.0.7 REMARK 210 METHOD USED : SIMULATED ANNELING TORSION ANGLE REMARK 210 DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 20 H THR A 24 1.44 REMARK 500 O SER A 61 H LEU A 65 1.51 REMARK 500 O LEU A 73 H ILE A 77 1.55 REMARK 500 O ASN A 71 H PHE A 75 1.58 REMARK 500 O PRO A 59 H ILE A 63 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 -41.21 -178.76 REMARK 500 1 SER A 3 -55.75 -141.77 REMARK 500 1 SER A 5 93.33 -172.05 REMARK 500 1 GLU A 10 95.95 49.85 REMARK 500 1 THR A 24 -89.32 -37.62 REMARK 500 1 ASP A 44 27.41 42.97 REMARK 500 1 ILE A 46 100.56 -51.54 REMARK 500 1 LYS A 50 69.87 -108.53 REMARK 500 1 CYS A 55 99.86 -65.27 REMARK 500 1 CYS A 58 147.77 66.66 REMARK 500 1 LEU A 65 -62.16 -94.55 REMARK 500 1 GLN A 70 -36.02 -39.13 REMARK 500 1 VAL A 80 156.99 -48.88 REMARK 500 1 SER A 87 96.09 62.53 REMARK 500 1 SER A 90 115.30 177.60 REMARK 500 2 SER A 5 167.74 178.01 REMARK 500 2 GLU A 9 -147.35 -129.59 REMARK 500 2 THR A 24 -90.73 -41.96 REMARK 500 2 ARG A 25 48.22 -150.69 REMARK 500 2 ASP A 44 29.84 40.17 REMARK 500 2 ILE A 46 100.80 -47.27 REMARK 500 2 LYS A 50 70.57 -100.49 REMARK 500 2 CYS A 55 95.58 -50.36 REMARK 500 2 SER A 57 -69.21 68.85 REMARK 500 2 LEU A 65 -64.80 -93.38 REMARK 500 2 GLU A 79 -70.97 -64.89 REMARK 500 3 SER A 2 89.76 41.02 REMARK 500 3 SER A 6 105.97 -168.38 REMARK 500 3 GLU A 9 76.17 179.97 REMARK 500 3 THR A 24 -90.73 -36.44 REMARK 500 3 ARG A 25 43.95 -141.48 REMARK 500 3 ASP A 44 30.48 39.49 REMARK 500 3 ILE A 46 100.58 -48.99 REMARK 500 3 LYS A 50 68.69 -106.37 REMARK 500 3 CYS A 55 166.66 178.71 REMARK 500 3 SER A 60 -71.33 -49.41 REMARK 500 3 LEU A 65 -64.24 -93.63 REMARK 500 3 SER A 87 103.50 53.89 REMARK 500 3 SER A 90 91.51 43.25 REMARK 500 3 SER A 91 84.24 60.57 REMARK 500 4 GLU A 9 84.72 -178.32 REMARK 500 4 GLU A 10 72.73 -152.98 REMARK 500 4 ARG A 25 36.91 -152.27 REMARK 500 4 ASP A 44 19.96 53.51 REMARK 500 4 ILE A 46 100.22 -53.96 REMARK 500 4 CYS A 55 40.97 -105.02 REMARK 500 4 SER A 60 -70.27 -62.22 REMARK 500 4 SER A 61 -38.24 -38.72 REMARK 500 4 LEU A 65 -64.62 -91.02 REMARK 500 4 VAL A 80 160.08 -48.11 REMARK 500 REMARK 500 THIS ENTRY HAS 266 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT007000028.1 RELATED DB: TARGETDB DBREF 1VEH A 8 86 UNP Q9QZ23 HIRP5_MOUSE 153 231 SEQADV 1VEH GLY A 1 UNP Q9QZ23 CLONING ARTIFACT SEQADV 1VEH SER A 2 UNP Q9QZ23 CLONING ARTIFACT SEQADV 1VEH SER A 3 UNP Q9QZ23 CLONING ARTIFACT SEQADV 1VEH GLY A 4 UNP Q9QZ23 CLONING ARTIFACT SEQADV 1VEH SER A 5 UNP Q9QZ23 CLONING ARTIFACT SEQADV 1VEH SER A 6 UNP Q9QZ23 CLONING ARTIFACT SEQADV 1VEH GLY A 7 UNP Q9QZ23 CLONING ARTIFACT SEQADV 1VEH SER A 87 UNP Q9QZ23 CLONING ARTIFACT SEQADV 1VEH GLY A 88 UNP Q9QZ23 CLONING ARTIFACT SEQADV 1VEH PRO A 89 UNP Q9QZ23 CLONING ARTIFACT SEQADV 1VEH SER A 90 UNP Q9QZ23 CLONING ARTIFACT SEQADV 1VEH SER A 91 UNP Q9QZ23 CLONING ARTIFACT SEQADV 1VEH GLY A 92 UNP Q9QZ23 CLONING ARTIFACT SEQRES 1 A 92 GLY SER SER GLY SER SER GLY SER GLU GLU ASP ASP GLU SEQRES 2 A 92 VAL VAL ALA MET ILE LYS GLU LEU LEU ASP THR ARG ILE SEQRES 3 A 92 ARG PRO THR VAL GLN GLU ASP GLY GLY ASP VAL ILE TYR SEQRES 4 A 92 ARG GLY PHE GLU ASP GLY ILE VAL ARG LEU LYS LEU GLN SEQRES 5 A 92 GLY SER CYS THR SER CYS PRO SER SER ILE ILE THR LEU SEQRES 6 A 92 LYS SER GLY ILE GLN ASN MET LEU GLN PHE TYR ILE PRO SEQRES 7 A 92 GLU VAL GLU GLY VAL GLU GLN VAL SER GLY PRO SER SER SEQRES 8 A 92 GLY HELIX 1 1 ASP A 12 ARG A 25 1 14 HELIX 2 2 ILE A 26 GLY A 34 1 9 HELIX 3 3 CYS A 58 LEU A 65 1 8 HELIX 4 4 LEU A 65 ILE A 77 1 13 SHEET 1 A 3 TYR A 39 GLU A 43 0 SHEET 2 A 3 ILE A 46 LEU A 49 -1 O ARG A 48 N ARG A 40 SHEET 3 A 3 VAL A 83 GLN A 85 1 O GLU A 84 N LEU A 49 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1
Complete list - r 2 2 Bytes