Header list of 1v9w.pdb file
Complete list - r 2 2 Bytes
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 03-FEB-04 1V9W
TITLE SOLUTION STRUCTURE OF MOUSE PUTATIVE 42-9-9 PROTEIN
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: PUTATIVE 42-9-9 PROTEIN;
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS;
SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE;
SOURCE 4 ORGANISM_TAXID: 10090;
SOURCE 5 GENE: RIKEN CDNA 1110050H17;
SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P020128-01;
SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS THIOREDOXIN-LIKE FOLD, STRUCTURAL GENOMICS, RIKEN STRUCTURAL
KEYWDS 2 GENOMICS/PROTEOMICS INITIATIVE, RSGI, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN STRUCTURAL
AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 3 02-MAR-22 1V9W 1 REMARK SEQADV
REVDAT 2 24-FEB-09 1V9W 1 VERSN
REVDAT 1 03-AUG-04 1V9W 0
JRNL AUTH N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA
JRNL TITL SOLUTION STRUCTURE OF MOUSE PUTATIVE 42-9-9 PROTEIN
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : XWINNMR 2.6, CYANA 2.0.17
REMARK 3 AUTHORS : BRUKER (XWINNMR), GUENTERT, P. (CYANA)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1V9W COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-FEB-04.
REMARK 100 THE DEPOSITION ID IS D_1000006389.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 6.0
REMARK 210 IONIC STRENGTH : 120MM
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 0.9MM PROTEIN U-15N,13C; 20MM
REMARK 210 PHOSPHATE BUFFER NA; 100MM NACL;
REMARK 210 1MM D-DTT; 0.02% NAN3; 10% D2O
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N
REMARK 210 -SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ
REMARK 210 SPECTROMETER MODEL : AVANCE
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW 5.0.4,
REMARK 210 KUJIRA 0.853, CYANA 2.0.17
REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST
REMARK 210 RESTRAINT VIOLATIONS, TARGET
REMARK 210 FUNCTION
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 ALA A 9 -178.81 -56.92
REMARK 500 1 TRP A 49 -39.82 -37.02
REMARK 500 1 ASP A 86 103.28 -43.78
REMARK 500 1 TYR A 106 107.61 -44.12
REMARK 500 2 SER A 2 -60.35 -133.27
REMARK 500 2 GLU A 3 125.14 -35.61
REMARK 500 2 TRP A 49 -19.22 -48.42
REMARK 500 2 ASP A 70 101.41 -49.56
REMARK 500 2 ASP A 86 100.29 -38.71
REMARK 500 2 LYS A 96 48.24 36.64
REMARK 500 2 THR A 98 -64.45 -98.28
REMARK 500 2 PRO A 109 3.20 -69.75
REMARK 500 2 SER A 121 -38.53 -37.26
REMARK 500 3 MET A 8 157.55 -49.46
REMARK 500 3 ALA A 9 166.14 -44.44
REMARK 500 3 TRP A 49 -30.49 -37.04
REMARK 500 3 ASP A 70 95.85 -48.04
REMARK 500 3 ASP A 86 99.76 -36.61
REMARK 500 3 LYS A 96 45.99 38.89
REMARK 500 3 TYR A 106 109.89 -43.89
REMARK 500 3 PRO A 109 3.02 -69.72
REMARK 500 4 THR A 7 46.92 -103.71
REMARK 500 4 ASP A 70 100.83 -45.33
REMARK 500 4 TYR A 106 108.21 -41.16
REMARK 500 4 PRO A 109 2.76 -69.73
REMARK 500 5 SER A 2 131.41 -35.18
REMARK 500 5 ASP A 70 93.72 -49.43
REMARK 500 5 ASP A 86 97.71 -34.77
REMARK 500 5 THR A 98 -69.29 -97.82
REMARK 500 5 PRO A 109 2.55 -69.71
REMARK 500 6 ALA A 9 174.80 -54.86
REMARK 500 6 GLU A 69 118.36 -166.68
REMARK 500 6 ASP A 70 95.69 -49.67
REMARK 500 6 ASP A 80 173.00 -58.85
REMARK 500 6 ASP A 86 100.50 -38.74
REMARK 500 6 THR A 98 -69.53 -97.55
REMARK 500 6 TYR A 106 108.71 -42.54
REMARK 500 6 PRO A 109 0.31 -69.78
REMARK 500 6 SER A 121 -37.46 -38.57
REMARK 500 7 ASP A 43 -174.89 -58.50
REMARK 500 7 ASP A 70 102.86 -48.10
REMARK 500 7 ASP A 86 106.65 -43.52
REMARK 500 7 PRO A 109 0.94 -69.78
REMARK 500 8 TYR A 37 78.56 -111.48
REMARK 500 8 ASP A 43 -174.94 -53.04
REMARK 500 8 ASP A 70 98.46 -44.54
REMARK 500 8 ASP A 80 173.63 -59.66
REMARK 500 8 THR A 98 -71.15 -103.14
REMARK 500 8 PRO A 109 1.89 -69.79
REMARK 500 9 SER A 2 151.03 -42.73
REMARK 500
REMARK 500 THIS ENTRY HAS 124 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: MMK001000693.1 RELATED DB: TARGETDB
DBREF 1V9W A 8 130 UNP Q9D0Y4 Q9D0Y4_MOUSE 1 123
SEQADV 1V9W GLY A 1 UNP Q9D0Y4 CLONING ARTIFACT
SEQADV 1V9W SER A 2 UNP Q9D0Y4 CLONING ARTIFACT
SEQADV 1V9W GLU A 3 UNP Q9D0Y4 CLONING ARTIFACT
SEQADV 1V9W GLY A 4 UNP Q9D0Y4 CLONING ARTIFACT
SEQADV 1V9W ALA A 5 UNP Q9D0Y4 CLONING ARTIFACT
SEQADV 1V9W ALA A 6 UNP Q9D0Y4 CLONING ARTIFACT
SEQADV 1V9W THR A 7 UNP Q9D0Y4 CLONING ARTIFACT
SEQRES 1 A 130 GLY SER GLU GLY ALA ALA THR MET ALA THR PHE GLU GLU
SEQRES 2 A 130 VAL SER VAL LEU GLY PHE GLU GLU PHE ASP LYS ALA VAL
SEQRES 3 A 130 LYS GLU HIS GLU SER LYS THR ILE PHE ALA TYR PHE SER
SEQRES 4 A 130 GLY SER LYS ASP THR GLU GLY LYS SER TRP CYS PRO ASP
SEQRES 5 A 130 CYS VAL GLU ALA GLU PRO VAL ILE ARG GLU GLY LEU LYS
SEQRES 6 A 130 HIS VAL THR GLU ASP CYS VAL PHE ILE TYR CYS GLN VAL
SEQRES 7 A 130 GLY ASP LYS PRO TYR TRP LYS ASP PRO ASN ASN ASP PHE
SEQRES 8 A 130 ARG GLN LYS LEU LYS ILE THR ALA VAL PRO THR LEU LEU
SEQRES 9 A 130 LYS TYR GLY THR PRO GLN LYS LEU VAL GLU SER GLU CYS
SEQRES 10 A 130 CYS GLN SER SER LEU VAL GLU MET ILE PHE SER GLU ASP
HELIX 1 1 GLY A 18 HIS A 29 1 12
HELIX 2 2 CYS A 50 VAL A 67 1 18
HELIX 3 3 ASP A 80 LYS A 85 1 6
HELIX 4 4 ASN A 89 LYS A 94 1 6
HELIX 5 5 VAL A 113 GLN A 119 1 7
HELIX 6 6 GLN A 119 GLU A 129 1 11
SHEET 1 A 5 PHE A 11 LEU A 17 0
SHEET 2 A 5 CYS A 71 GLN A 77 1 O TYR A 75 N VAL A 16
SHEET 3 A 5 THR A 33 PHE A 38 1 N TYR A 37 O ILE A 74
SHEET 4 A 5 THR A 102 TYR A 106 -1 O THR A 102 N PHE A 38
SHEET 5 A 5 LYS A 111 LEU A 112 -1 O LEU A 112 N LEU A 103
CISPEP 1 VAL A 100 PRO A 101 1 -0.05
CISPEP 2 VAL A 100 PRO A 101 2 -0.09
CISPEP 3 VAL A 100 PRO A 101 3 0.00
CISPEP 4 VAL A 100 PRO A 101 4 -0.03
CISPEP 5 VAL A 100 PRO A 101 5 -0.01
CISPEP 6 VAL A 100 PRO A 101 6 -0.09
CISPEP 7 VAL A 100 PRO A 101 7 -0.14
CISPEP 8 VAL A 100 PRO A 101 8 -0.13
CISPEP 9 VAL A 100 PRO A 101 9 -0.08
CISPEP 10 VAL A 100 PRO A 101 10 -0.09
CISPEP 11 VAL A 100 PRO A 101 11 -0.08
CISPEP 12 VAL A 100 PRO A 101 12 -0.05
CISPEP 13 VAL A 100 PRO A 101 13 -0.03
CISPEP 14 VAL A 100 PRO A 101 14 0.01
CISPEP 15 VAL A 100 PRO A 101 15 -0.06
CISPEP 16 VAL A 100 PRO A 101 16 -0.08
CISPEP 17 VAL A 100 PRO A 101 17 -0.09
CISPEP 18 VAL A 100 PRO A 101 18 -0.03
CISPEP 19 VAL A 100 PRO A 101 19 -0.03
CISPEP 20 VAL A 100 PRO A 101 20 -0.05
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 2 2 Bytes