Header list of 1v85.pdb file
Complete list - r 2 2 Bytes
HEADER APOPTOSIS 29-DEC-03 1V85
TITLE STERILE ALPHA MOTIF (SAM) DOMAIN OF MOUSE BIFUNCTIONAL APOPTOSIS
TITLE 2 REGULATOR
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: SIMILAR TO RING FINGER PROTEIN 36;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: STERILE ALPHA MOTIF (SAM) DOMAIN;
COMPND 5 SYNONYM: BIFUNCTIONAL APOPTOSIS REGULATOR;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS;
SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE;
SOURCE 4 ORGANISM_TAXID: 10090;
SOURCE 5 GENE: RIKEN CDNA 3010001A07;
SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P030120-59;
SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS APOPTOSIS, NEURON, CELL DEATH, STRUCTURAL GENOMICS, RIKEN STRUCTURAL
KEYWDS 2 GENOMICS/PROTEOMICS INITIATIVE, RSGI
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR A.GORONCY,T.KIGAWA,S.KOSHIBA,F.HAYASHI,N.KOBAYASHI,N.TOCHIO,M.INOUE,
AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 3 02-MAR-22 1V85 1 REMARK SEQADV
REVDAT 2 24-FEB-09 1V85 1 VERSN
REVDAT 1 25-JAN-05 1V85 0
JRNL AUTH A.GORONCY,T.KIGAWA,S.KOSHIBA,F.HAYASHI,N.KOBAYASHI,N.TOCHIO,
JRNL AUTH 2 M.INOUE,S.YOKOYAMA
JRNL TITL STERILE ALPHA MOTIF (SAM) DOMAIN OF MOUSE BIFUNCTIONAL
JRNL TITL 2 APOPTOSIS REGULATOR
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : VNMR 6.1C, CYANA 2.0.17
REMARK 3 AUTHORS : VARIAN (VNMR), PETER GUENTERT (CYANA)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1V85 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-DEC-03.
REMARK 100 THE DEPOSITION ID IS D_1000006326.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 7.0
REMARK 210 IONIC STRENGTH : 120MM
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 1.14MM SAM DOMAIN, 20MM
REMARK 210 PHOSPHATE BUFFER NA, 100MM NACL,
REMARK 210 1MM D-DTT, 0.02% NAN3
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C
REMARK 210 -SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ
REMARK 210 SPECTROMETER MODEL : INOVA
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW
REMARK 210 5.0.14, KUJIRA 0.863
REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 SER A 2 42.21 -91.69
REMARK 500 1 THR A 67 37.54 33.43
REMARK 500 1 ILE A 68 93.14 -45.57
REMARK 500 1 GLU A 69 41.91 -81.24
REMARK 500 2 SER A 3 44.41 38.85
REMARK 500 2 HIS A 14 -74.88 -49.27
REMARK 500 2 ARG A 47 34.32 38.85
REMARK 500 2 VAL A 48 104.01 -55.38
REMARK 500 2 THR A 67 38.36 30.59
REMARK 500 2 ILE A 68 97.45 -50.91
REMARK 500 3 SER A 5 157.97 -47.68
REMARK 500 3 HIS A 9 118.00 -34.49
REMARK 500 3 VAL A 48 93.16 -62.12
REMARK 500 3 GLU A 59 -71.25 -57.55
REMARK 500 3 THR A 67 38.83 33.24
REMARK 500 3 ILE A 68 98.47 -45.18
REMARK 500 3 SER A 86 151.61 -43.61
REMARK 500 3 PRO A 88 -178.89 -69.77
REMARK 500 3 SER A 90 117.43 -39.09
REMARK 500 4 HIS A 9 109.03 -40.32
REMARK 500 4 ARG A 47 45.73 39.43
REMARK 500 4 VAL A 48 95.63 -67.14
REMARK 500 4 GLU A 58 -37.02 -35.80
REMARK 500 4 GLU A 59 -73.58 -66.41
REMARK 500 4 THR A 67 38.62 30.08
REMARK 500 4 ILE A 68 94.93 -48.03
REMARK 500 4 GLU A 69 40.26 -83.14
REMARK 500 4 SER A 89 165.83 -43.66
REMARK 500 5 GLU A 8 149.65 -170.52
REMARK 500 5 VAL A 48 98.77 -66.37
REMARK 500 5 THR A 67 40.00 29.31
REMARK 500 5 ILE A 68 93.13 -42.08
REMARK 500 5 GLU A 69 37.33 -82.98
REMARK 500 6 THR A 22 -26.88 -38.75
REMARK 500 6 VAL A 48 101.38 -55.87
REMARK 500 6 GLU A 58 -19.62 -48.19
REMARK 500 6 THR A 67 34.95 33.31
REMARK 500 6 ILE A 68 87.30 -50.26
REMARK 500 6 LEU A 78 -70.94 -49.45
REMARK 500 6 PRO A 88 1.83 -69.74
REMARK 500 7 SER A 5 42.85 38.13
REMARK 500 7 HIS A 9 96.45 -66.35
REMARK 500 7 GLU A 59 -71.04 -60.48
REMARK 500 7 THR A 67 37.97 30.66
REMARK 500 7 ILE A 68 92.61 -45.90
REMARK 500 7 GLU A 69 40.65 -84.86
REMARK 500 7 ILE A 77 -73.75 -51.23
REMARK 500 8 THR A 22 -28.92 -38.16
REMARK 500 8 VAL A 48 90.53 -65.68
REMARK 500 8 THR A 67 34.94 33.67
REMARK 500
REMARK 500 THIS ENTRY HAS 134 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: MMT007008235 RELATED DB: TARGETDB
DBREF 1V85 A 8 85 UNP Q9CXY3 Q9CXY3_MOUSE 170 247
SEQADV 1V85 GLY A 1 UNP Q9CXY3 CLONING ARTIFACT
SEQADV 1V85 SER A 2 UNP Q9CXY3 CLONING ARTIFACT
SEQADV 1V85 SER A 3 UNP Q9CXY3 CLONING ARTIFACT
SEQADV 1V85 GLY A 4 UNP Q9CXY3 CLONING ARTIFACT
SEQADV 1V85 SER A 5 UNP Q9CXY3 CLONING ARTIFACT
SEQADV 1V85 SER A 6 UNP Q9CXY3 CLONING ARTIFACT
SEQADV 1V85 GLY A 7 UNP Q9CXY3 CLONING ARTIFACT
SEQADV 1V85 SER A 86 UNP Q9CXY3 CLONING ARTIFACT
SEQADV 1V85 GLY A 87 UNP Q9CXY3 CLONING ARTIFACT
SEQADV 1V85 PRO A 88 UNP Q9CXY3 CLONING ARTIFACT
SEQADV 1V85 SER A 89 UNP Q9CXY3 CLONING ARTIFACT
SEQADV 1V85 SER A 90 UNP Q9CXY3 CLONING ARTIFACT
SEQADV 1V85 GLY A 91 UNP Q9CXY3 CLONING ARTIFACT
SEQRES 1 A 91 GLY SER SER GLY SER SER GLY GLU HIS GLY LEU LEU VAL
SEQRES 2 A 91 HIS LYS ALA VAL ASP LYS TRP THR THR GLU GLU VAL VAL
SEQRES 3 A 91 LEU TRP LEU GLU GLN LEU GLY PRO TRP ALA SER LEU TYR
SEQRES 4 A 91 ARG ASP ARG PHE LEU SER GLU ARG VAL ASN GLY ARG LEU
SEQRES 5 A 91 LEU LEU THR LEU THR GLU GLU GLU PHE SER ARG ALA PRO
SEQRES 6 A 91 TYR THR ILE GLU ASN SER SER HIS ARG ARG VAL ILE LEU
SEQRES 7 A 91 THR GLU LEU GLU ARG VAL ARG SER GLY PRO SER SER GLY
HELIX 1 1 GLY A 10 LYS A 15 1 6
HELIX 2 2 ALA A 16 TRP A 20 5 5
HELIX 3 3 THR A 21 GLY A 33 1 13
HELIX 4 4 ALA A 36 GLU A 46 1 11
HELIX 5 5 ASN A 49 LEU A 56 1 8
HELIX 6 6 THR A 57 ARG A 63 1 7
HELIX 7 7 ASN A 70 SER A 86 1 17
CISPEP 1 ALA A 64 PRO A 65 1 -0.02
CISPEP 2 ALA A 64 PRO A 65 2 0.06
CISPEP 3 ALA A 64 PRO A 65 3 -0.06
CISPEP 4 ALA A 64 PRO A 65 4 0.00
CISPEP 5 ALA A 64 PRO A 65 5 -0.06
CISPEP 6 ALA A 64 PRO A 65 6 0.01
CISPEP 7 ALA A 64 PRO A 65 7 -0.01
CISPEP 8 ALA A 64 PRO A 65 8 0.03
CISPEP 9 ALA A 64 PRO A 65 9 0.04
CISPEP 10 ALA A 64 PRO A 65 10 -0.03
CISPEP 11 ALA A 64 PRO A 65 11 -0.12
CISPEP 12 ALA A 64 PRO A 65 12 0.06
CISPEP 13 ALA A 64 PRO A 65 13 -0.07
CISPEP 14 ALA A 64 PRO A 65 14 -0.02
CISPEP 15 ALA A 64 PRO A 65 15 -0.02
CISPEP 16 ALA A 64 PRO A 65 16 0.07
CISPEP 17 ALA A 64 PRO A 65 17 -0.01
CISPEP 18 ALA A 64 PRO A 65 18 0.05
CISPEP 19 ALA A 64 PRO A 65 19 0.02
CISPEP 20 ALA A 64 PRO A 65 20 0.03
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 2 2 Bytes