Header list of 1ut3.pdb file
Complete list - 25 20 Bytes
HEADER ANTIBIOTIC 02-DEC-03 1UT3
TITLE SOLUTION STRUCTURE OF SPHENISCIN-2, A BETA-DEFENSIN FROM
TITLE 2 PENGUIN STOMACH PRESERVING FOOD
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: SPHENISCIN-2;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: SPHE-2, PBD-2;
COMPND 5 OTHER_DETAILS: ANTIMICROBIAL PEPTIDE BELONGING TO THE
COMPND 6 DEFENSIN FAMILY.
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES;
SOURCE 3 ORGANISM_SCIENTIFIC: APTENODYTES PATAGONICUS;
SOURCE 4 ORGANISM_COMMON: KING PENGUIN;
SOURCE 5 ORGANISM_TAXID: 9234;
SOURCE 6 TISSUE: STOMACHAL CONTENT;
SOURCE 7 OTHER_DETAILS: THE STUDIES ON THE KING PENGUINS WERE
SOURCE 8 CARRIED OUT ON POSSESSION ISLAND, CROZET ARCHIPELAGO.
KEYWDS ANTIMICROBIAL PEPTIDE, PENGUIN, DEFENSIN, NMR STRUCTURE,
KEYWDS 2 GASTROINTESTINAL IMMUNITY, ANTIBIOTIC, FUNGICIDE
EXPDTA SOLUTION NMR
NUMMDL 10
AUTHOR C.LANDON,H.LABBE,C.THOUZEAU,P.BULET,F.VOVELLE
REVDAT 3 24-FEB-09 1UT3 1 VERSN
REVDAT 2 16-JUL-04 1UT3 1 JRNL
REVDAT 1 06-MAY-04 1UT3 0
JRNL AUTH C.LANDON,C.THOUZEAU,H.LABBE,P.BULET,F.VOVELLE
JRNL TITL SOLUTION STRUCTURE OF SPHENISCIN, A
JRNL TITL 2 {BETA}-DEFENSIN FROM THE PENGUIN STOMACH
JRNL REF J.BIOL.CHEM. V. 279 30433 2004
JRNL REFN ISSN 0021-9258
JRNL PMID 15123713
JRNL DOI 10.1074/JBC.M401338200
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH C.THOUZEAU,Y.LE MAHO,G.FROGET,L.SABATIER,
REMARK 1 AUTH 2 C.LE BOHEC,J.A.HOFFMANN,P.BULET
REMARK 1 TITL SPHENISCINS, AVIAN BETA-DEFENSINS IN PRESERVED
REMARK 1 TITL 2 STOMACH CONTENTS OF THE KING PENGUIN, APTENODYTES
REMARK 1 TITL 3 PATAGONICUS.
REMARK 1 REF J.BIOL.CHEM. V. 278 51053 2003
REMARK 1 REFN ISSN 0021-9258
REMARK 1 PMID 14525994
REMARK 1 DOI 10.1074/JBC.M306839200
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : ARIA1.1/CNS1.1
REMARK 3 AUTHORS : LINGE
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1UT3 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-DEC-03.
REMARK 100 THE PDBE ID CODE IS EBI-14072.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 293
REMARK 210 PH : 4.3
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : 1 ATM
REMARK 210 SAMPLE CONTENTS : NULL
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D-1H-COSY,2D-1H-TOCSY,
REMARK 210 2D-1H-NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 600
REMARK 210 SPECTROMETER MODEL : INOVA600
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : ARIA/CNS
REMARK 210 METHOD USED : NULL
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10
REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST ENERGY, LEAST
REMARK 210 RESTRAINT VIOLATION
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 HE2 PHE A 11 - HG2 ARG A 36 1.50
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 CYS A 5 -157.67 -137.58
REMARK 500 1 PRO A 20 46.87 -86.53
REMARK 500 1 SER A 28 -141.85 -146.61
REMARK 500 1 CYS A 33 69.14 -103.98
REMARK 500 2 ARG A 18 45.88 -90.45
REMARK 500 2 PHE A 19 146.62 -171.47
REMARK 500 2 PRO A 20 60.44 -63.24
REMARK 500 2 SER A 28 -140.44 -147.55
REMARK 500 2 VAL A 37 44.13 -79.03
REMARK 500 3 ARG A 16 149.22 69.61
REMARK 500 3 PRO A 20 46.12 -75.06
REMARK 500 3 ARG A 29 -60.91 -172.83
REMARK 500 3 VAL A 37 60.25 -108.36
REMARK 500 4 ARG A 18 56.83 -154.93
REMARK 500 4 PHE A 19 -66.90 -166.39
REMARK 500 5 LEU A 4 75.66 -160.07
REMARK 500 5 LEU A 7 -45.12 72.25
REMARK 500 5 PRO A 20 83.98 -53.99
REMARK 500 5 SER A 28 -147.98 -114.55
REMARK 500 6 LEU A 4 41.40 -108.24
REMARK 500 6 PHE A 11 138.59 -175.39
REMARK 500 6 PRO A 20 40.88 -72.49
REMARK 500 6 SER A 28 -57.02 -141.15
REMARK 500 6 ARG A 29 -66.47 -172.24
REMARK 500 7 LEU A 7 -33.09 -151.23
REMARK 500 7 SER A 28 -146.61 -138.77
REMARK 500 7 VAL A 37 37.90 -75.89
REMARK 500 8 ARG A 6 -37.16 68.96
REMARK 500 8 ARG A 18 46.32 -163.08
REMARK 500 8 PHE A 19 -61.89 -172.84
REMARK 500 8 SER A 21 148.72 179.52
REMARK 500 9 LEU A 4 52.66 -114.10
REMARK 500 9 ARG A 6 -19.19 71.11
REMARK 500 9 LEU A 7 -28.62 72.26
REMARK 500 9 ARG A 18 57.03 -162.56
REMARK 500 9 PHE A 19 -63.01 -159.79
REMARK 500 9 ARG A 26 140.79 -170.99
REMARK 500 9 VAL A 37 65.96 -114.87
REMARK 500 10 LEU A 4 38.75 -88.72
REMARK 500 10 ARG A 6 -35.69 70.24
REMARK 500 10 ARG A 8 -22.61 72.72
REMARK 500 10 ARG A 16 112.20 -161.31
REMARK 500 10 ARG A 18 52.05 -163.38
REMARK 500 10 PHE A 19 -65.27 -167.05
REMARK 500 10 VAL A 37 42.27 -152.68
REMARK 500
REMARK 500 REMARK: NULL
REMARK 700
REMARK 700 SHEET
REMARK 700 DETERMINATION METHOD: AUTHOR PROVIDED.
DBREF 1UT3 A 1 38 UNP P83430 SHE2_APTPA 1 38
SEQRES 1 A 38 SER PHE GLY LEU CYS ARG LEU ARG ARG GLY PHE CYS ALA
SEQRES 2 A 38 ARG GLY ARG CYS ARG PHE PRO SER ILE PRO ILE GLY ARG
SEQRES 3 A 38 CYS SER ARG PHE VAL GLN CYS CYS ARG ARG VAL TRP
SHEET 1 AA 3 PHE A 11 ALA A 13 0
SHEET 2 AA 3 VAL A 31 ARG A 36 -1 O GLN A 32 N ALA A 13
SHEET 3 AA 3 SER A 21 CYS A 27 -1 O ILE A 22 N ARG A 35
SSBOND 1 CYS A 5 CYS A 33 1555 1555 2.02
SSBOND 2 CYS A 12 CYS A 27 1555 1555 2.03
SSBOND 3 CYS A 17 CYS A 34 1555 1555 2.03
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - 25 20 Bytes