Header list of 1uit.pdb file
Complete list - r 2 2 Bytes
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 22-JUL-03 1UIT
TITLE SOLUTION STRUCTURE OF RSGI RUH-006, THE THIRD PDZ DOMAIN OF HDLG5
TITLE 2 (KIAA0583) PROTEIN [HOMO SAPIENS]
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: HUMAN DISCS LARGE 5 PROTEIN;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: PDZ DOMAIN;
COMPND 5 SYNONYM: HDLG5/KIAA0583 PROTEIN, DISCS, LARGE HOMOLOG 5;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: KAZUSA CDNA HJ00729;
SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P021030-24;
SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS SYSTEM
KEYWDS PDZ DOMAIN, HDLG5, MAGUK FAMILY, STRUCTURAL GENOMICS, RIKEN
KEYWDS 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR T.ABE,H.HIROTA,N.KOBAYASHI,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL
AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 3 02-MAR-22 1UIT 1 REMARK SEQADV
REVDAT 2 24-FEB-09 1UIT 1 VERSN
REVDAT 1 22-JAN-04 1UIT 0
JRNL AUTH T.ABE,H.HIROTA,N.KOBAYASHI,F.HAYASHI,S.YOKOYAMA
JRNL TITL SOLUTION STRUCTURE OF RSGI RUH-006, THE THIRD PDZ DOMAIN OF
JRNL TITL 2 HDLG5 (KIAA0583) PROTEIN [HOMO SAPIENS]
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : VNMR 6.1C, CYANA 1.0.7
REMARK 3 AUTHORS : VARIAN (VNMR), GUENTERT, P. (CYANA)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1UIT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-JUL-03.
REMARK 100 THE DEPOSITION ID IS D_1000005869.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 7.0
REMARK 210 IONIC STRENGTH : 100MM NACL
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 1.3MM RSGI RUH-006 U-15N, 13C;
REMARK 210 20MM D-TRIS-HCL BUFFER; 100MM
REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; 90%
REMARK 210 H2O, 10% D2O
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N
REMARK 210 -SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ
REMARK 210 SPECTROMETER MODEL : INOVA
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4,
REMARK 210 KUJIRA 0.816
REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION
REMARK 210 ANGLE DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST
REMARK 210 RESTRAINT VIOLATIONS, STRUCTURES
REMARK 210 WITH THE LOWEST ENERGY, TARGET
REMARK 210 FUNCTION
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR
REMARK 210 SPECTROSCOPY.
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O THR A 78 H ALA A 82 1.49
REMARK 500 O GLN A 81 H ILE A 85 1.52
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 SER A 3 -59.47 -140.64
REMARK 500 1 GLU A 9 109.82 -161.71
REMARK 500 1 TYR A 16 -63.47 68.17
REMARK 500 1 GLU A 18 107.97 -41.83
REMARK 500 1 GLU A 19 159.13 -40.80
REMARK 500 1 GLN A 26 71.36 -104.59
REMARK 500 1 LYS A 27 -73.96 -54.45
REMARK 500 1 SER A 29 41.80 79.12
REMARK 500 1 GLU A 40 -74.63 -39.38
REMARK 500 1 ASP A 64 104.81 -57.69
REMARK 500 1 ILE A 72 158.39 -44.84
REMARK 500 1 GLN A 98 80.86 -171.37
REMARK 500 1 TYR A 99 131.84 -36.92
REMARK 500 1 HIS A 102 55.13 -159.46
REMARK 500 1 VAL A 103 63.12 -164.61
REMARK 500 1 SER A 116 81.44 48.20
REMARK 500 2 LYS A 12 -61.68 -179.61
REMARK 500 2 TYR A 16 -42.69 -160.64
REMARK 500 2 GLU A 18 107.30 -49.87
REMARK 500 2 GLU A 19 153.27 -39.21
REMARK 500 2 GLN A 26 67.98 -107.29
REMARK 500 2 LYS A 27 -80.13 -55.69
REMARK 500 2 SER A 29 35.49 -168.31
REMARK 500 2 GLU A 40 -66.70 73.55
REMARK 500 2 ASN A 70 17.03 58.67
REMARK 500 2 ARG A 75 111.68 -39.65
REMARK 500 2 SER A 76 33.81 85.29
REMARK 500 2 CYS A 90 112.94 160.06
REMARK 500 2 GLN A 98 82.96 -175.35
REMARK 500 2 TYR A 99 142.72 -37.54
REMARK 500 2 HIS A 102 51.36 -160.53
REMARK 500 2 VAL A 103 71.73 -158.52
REMARK 500 2 HIS A 104 -72.68 -73.99
REMARK 500 2 GLN A 105 91.51 54.02
REMARK 500 2 SER A 107 165.10 -49.35
REMARK 500 2 SER A 108 88.58 57.56
REMARK 500 2 HIS A 109 66.99 -159.70
REMARK 500 2 ARG A 111 168.89 57.35
REMARK 500 2 SER A 115 -57.97 -169.49
REMARK 500 3 SER A 5 115.52 -178.15
REMARK 500 3 SER A 6 166.22 178.47
REMARK 500 3 TYR A 16 150.68 56.84
REMARK 500 3 GLU A 18 109.16 -47.58
REMARK 500 3 GLU A 19 156.34 -47.80
REMARK 500 3 GLN A 26 73.17 -109.83
REMARK 500 3 LYS A 27 -76.31 -55.83
REMARK 500 3 SER A 29 32.57 -163.74
REMARK 500 3 CYS A 90 109.00 179.03
REMARK 500 3 GLN A 98 77.73 -164.07
REMARK 500 3 HIS A 102 60.96 -165.39
REMARK 500
REMARK 500 THIS ENTRY HAS 389 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: HSK002000567.1 RELATED DB: TARGETDB
DBREF 1UIT A 8 111 UNP Q8TDM6 DLG5_HUMAN 1226 1329
SEQADV 1UIT GLY A 1 UNP Q8TDM6 CLONING ARTIFACT
SEQADV 1UIT SER A 2 UNP Q8TDM6 CLONING ARTIFACT
SEQADV 1UIT SER A 3 UNP Q8TDM6 CLONING ARTIFACT
SEQADV 1UIT GLY A 4 UNP Q8TDM6 CLONING ARTIFACT
SEQADV 1UIT SER A 5 UNP Q8TDM6 CLONING ARTIFACT
SEQADV 1UIT SER A 6 UNP Q8TDM6 CLONING ARTIFACT
SEQADV 1UIT GLY A 7 UNP Q8TDM6 CLONING ARTIFACT
SEQADV 1UIT SER A 112 UNP Q8TDM6 CLONING ARTIFACT
SEQADV 1UIT GLY A 113 UNP Q8TDM6 CLONING ARTIFACT
SEQADV 1UIT PRO A 114 UNP Q8TDM6 CLONING ARTIFACT
SEQADV 1UIT SER A 115 UNP Q8TDM6 CLONING ARTIFACT
SEQADV 1UIT SER A 116 UNP Q8TDM6 CLONING ARTIFACT
SEQADV 1UIT GLY A 117 UNP Q8TDM6 CLONING ARTIFACT
SEQRES 1 A 117 GLY SER SER GLY SER SER GLY GLY GLU ARG ARG LYS ASP
SEQRES 2 A 117 ARG PRO TYR VAL GLU GLU PRO ARG HIS VAL LYS VAL GLN
SEQRES 3 A 117 LYS GLY SER GLU PRO LEU GLY ILE SER ILE VAL SER GLY
SEQRES 4 A 117 GLU LYS GLY GLY ILE TYR VAL SER LYS VAL THR VAL GLY
SEQRES 5 A 117 SER ILE ALA HIS GLN ALA GLY LEU GLU TYR GLY ASP GLN
SEQRES 6 A 117 LEU LEU GLU PHE ASN GLY ILE ASN LEU ARG SER ALA THR
SEQRES 7 A 117 GLU GLN GLN ALA ARG LEU ILE ILE GLY GLN GLN CYS ASP
SEQRES 8 A 117 THR ILE THR ILE LEU ALA GLN TYR ASN PRO HIS VAL HIS
SEQRES 9 A 117 GLN LEU SER SER HIS SER ARG SER GLY PRO SER SER GLY
HELIX 1 1 SER A 53 GLY A 59 1 7
HELIX 2 2 THR A 78 ILE A 86 1 9
SHEET 1 A 4 ARG A 21 GLN A 26 0
SHEET 2 A 4 THR A 92 ALA A 97 -1 O ALA A 97 N ARG A 21
SHEET 3 A 4 GLU A 68 PHE A 69 -1 N GLU A 68 O LEU A 96
SHEET 4 A 4 ILE A 72 ASN A 73 -1 O ILE A 72 N PHE A 69
SHEET 1 B 3 ILE A 34 SER A 38 0
SHEET 2 B 3 ILE A 44 VAL A 49 -1 O LYS A 48 N SER A 35
SHEET 3 B 3 GLN A 65 LEU A 66 -1 O LEU A 66 N ILE A 44
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 2 2 Bytes