Header list of 1ucv.pdb file
Complete list - r 2 2 Bytes
HEADER TRANSFERASE 23-APR-03 1UCV
TITLE STERILE ALPHA MOTIF (SAM) DOMAIN OF EPHRIN TYPE-A RECEPTOR 8
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: EPHRIN TYPE-A RECEPTOR 8;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: STERILE ALPHA MOTIF (SAM) DOMAIN;
COMPND 5 EC: 2.7.1.112;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: KAZUSA CDNA FH16961;
SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P021007-70;
SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS RECEPTOR OLIGOMERIZATION, DEVELOPMENTAL REGULATION, TYROSINE KINASE,
KEYWDS 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, STRUCTURAL
KEYWDS 3 GENOMICS, TRANSFERASE
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR A.GORONCY,T.KIGAWA,S.KOSHIBA,N.KOBAYASHI,N.TOCHIO,M.INOUE,S.YOKOYAMA,
AUTHOR 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 3 02-MAR-22 1UCV 1 REMARK SEQADV
REVDAT 2 24-FEB-09 1UCV 1 VERSN
REVDAT 1 11-MAY-04 1UCV 0
JRNL AUTH A.GORONCY,T.KIGAWA,S.KOSHIBA,N.KOBAYASHI,N.TOCHIO,M.INOUE,
JRNL AUTH 2 S.YOKOYAMA
JRNL TITL NMR STRUCTURE OF STERILE ALPHA MOTIF (SAM) DOMAIN OF EPHRIN
JRNL TITL 2 TYPE-A RECEPTOR 8
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : NMRVIEW 5.0.14, CYANA-CANDID 2.0.11
REMARK 3 AUTHORS : BRUCE A. JOHNSON (NMRVIEW), GUENTERT (CYANA
REMARK 3 -CANDID)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1UCV COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-APR-03.
REMARK 100 THE DEPOSITION ID IS D_1000005687.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 6.0
REMARK 210 IONIC STRENGTH : 120MM
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 1.20MM SAM DOMAIN, 20MM
REMARK 210 PHOSPHATE BUFFER, 100MM NACL,
REMARK 210 0.02% NAN3
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N
REMARK 210 -SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ
REMARK 210 SPECTROMETER MODEL : AVANCE
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRPIPE 20020425, XWINNMR 2.6,
REMARK 210 KUJIRA 0.801
REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 VAL A 10 -25.18 -39.97
REMARK 500 2 VAL A 10 -25.65 -39.29
REMARK 500 3 VAL A 10 -33.13 -37.45
REMARK 500 3 LEU A 52 109.63 -50.87
REMARK 500 4 VAL A 10 -29.15 -35.39
REMARK 500 4 ASP A 24 -38.11 -39.20
REMARK 500 4 HIS A 55 -62.49 -97.00
REMARK 500 4 GLN A 64 -34.06 -38.90
REMARK 500 5 VAL A 10 -25.57 -38.72
REMARK 500 5 ALA A 42 -37.11 -32.81
REMARK 500 5 LEU A 52 107.38 -50.33
REMARK 500 5 SER A 79 -170.03 69.97
REMARK 500 6 VAL A 10 -28.32 -36.86
REMARK 500 6 HIS A 55 -64.93 -97.69
REMARK 500 6 GLN A 64 -39.52 -39.55
REMARK 500 6 PRO A 78 178.80 -52.08
REMARK 500 7 VAL A 10 -25.33 -39.37
REMARK 500 7 ILE A 50 99.96 -68.20
REMARK 500 7 HIS A 55 -60.08 -95.79
REMARK 500 7 GLN A 56 -39.76 -36.71
REMARK 500 7 GLN A 64 -39.36 -39.82
REMARK 500 8 VAL A 10 -28.95 -36.75
REMARK 500 8 ILE A 50 100.00 -66.18
REMARK 500 8 LEU A 52 102.72 -45.57
REMARK 500 8 PRO A 78 98.77 -52.08
REMARK 500 9 VAL A 10 -26.95 -37.95
REMARK 500 9 LEU A 52 108.11 -49.91
REMARK 500 9 SER A 72 -169.99 69.97
REMARK 500 9 THR A 73 18.92 47.51
REMARK 500 9 PRO A 78 177.85 -52.11
REMARK 500 10 ASP A 24 -39.94 -38.62
REMARK 500 10 HIS A 55 -63.71 -91.83
REMARK 500 11 VAL A 10 -27.77 -38.09
REMARK 500 11 ALA A 42 -38.97 -37.16
REMARK 500 11 HIS A 55 -61.17 -97.53
REMARK 500 11 GLN A 56 -34.28 -36.25
REMARK 500 11 THR A 71 28.43 37.13
REMARK 500 12 ALA A 42 -37.39 -37.46
REMARK 500 12 GLN A 56 -27.77 -37.82
REMARK 500 13 VAL A 10 -27.80 -37.33
REMARK 500 13 LEU A 52 108.39 -50.06
REMARK 500 13 GLN A 64 -31.57 -39.90
REMARK 500 13 GLN A 74 -170.03 62.79
REMARK 500 13 PRO A 78 93.83 -52.11
REMARK 500 14 HIS A 55 -61.29 -94.82
REMARK 500 14 GLN A 56 -39.36 -37.09
REMARK 500 14 SER A 72 -170.01 63.21
REMARK 500 14 GLN A 74 -60.70 -91.14
REMARK 500 14 SER A 76 171.86 -50.86
REMARK 500 15 VAL A 10 -29.38 -35.04
REMARK 500
REMARK 500 THIS ENTRY HAS 73 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: HSK002001431.1 RELATED DB: TARGETDB
DBREF 1UCV A 8 75 UNP P29322 EPHA8_HUMAN 933 1000
SEQADV 1UCV GLY A 1 UNP P29322 CLONING ARTIFACT
SEQADV 1UCV SER A 2 UNP P29322 CLONING ARTIFACT
SEQADV 1UCV SER A 3 UNP P29322 CLONING ARTIFACT
SEQADV 1UCV GLY A 4 UNP P29322 CLONING ARTIFACT
SEQADV 1UCV SER A 5 UNP P29322 CLONING ARTIFACT
SEQADV 1UCV SER A 6 UNP P29322 CLONING ARTIFACT
SEQADV 1UCV GLY A 7 UNP P29322 CLONING ARTIFACT
SEQADV 1UCV SER A 76 UNP P29322 CLONING ARTIFACT
SEQADV 1UCV GLY A 77 UNP P29322 CLONING ARTIFACT
SEQADV 1UCV PRO A 78 UNP P29322 CLONING ARTIFACT
SEQADV 1UCV SER A 79 UNP P29322 CLONING ARTIFACT
SEQADV 1UCV SER A 80 UNP P29322 CLONING ARTIFACT
SEQADV 1UCV GLY A 81 UNP P29322 CLONING ARTIFACT
SEQRES 1 A 81 GLY SER SER GLY SER SER GLY LEU THR VAL GLY ASP TRP
SEQRES 2 A 81 LEU ASP SER ILE ARG MET GLY ARG TYR ARG ASP HIS PHE
SEQRES 3 A 81 ALA ALA GLY GLY TYR SER SER LEU GLY MET VAL LEU ARG
SEQRES 4 A 81 MET ASN ALA GLN ASP VAL ARG ALA LEU GLY ILE THR LEU
SEQRES 5 A 81 MET GLY HIS GLN LYS LYS ILE LEU GLY SER ILE GLN THR
SEQRES 6 A 81 MET ARG ALA GLN LEU THR SER THR GLN GLY SER GLY PRO
SEQRES 7 A 81 SER SER GLY
HELIX 1 1 THR A 9 ILE A 17 1 9
HELIX 2 2 ARG A 18 ARG A 18 5 1
HELIX 3 3 MET A 19 ARG A 21 5 3
HELIX 4 4 TYR A 22 GLY A 29 1 8
HELIX 5 5 SER A 33 LEU A 38 1 6
HELIX 6 6 ASN A 41 GLY A 49 1 9
HELIX 7 7 LEU A 52 THR A 71 1 20
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 2 2 Bytes