Header list of 1t84.pdb file
Complete list - r 2 2 Bytes
HEADER SIGNALING PROTEIN 11-MAY-04 1T84
TITLE SOLUTION STRUCTURE OF THE WISKOTT-ALDRICH SYNDROME PROTEIN (WASP)
TITLE 2 AUTOINHIBITED CORE DOMAIN COMPLEXED WITH (S)-WISKOSTATIN, A SMALL
TITLE 3 MOLECULE INHIBITOR
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: WISKOTT-ALDRICH SYNDROME PROTEIN;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: CORE AUTOINHIBITED DOMAIN (GTPASE BINDING DOMAIN IS
COMPND 5 COVALENTLY LINKED TO THE COFILIN HOMOLOGY AND ACIDIC REGIONS);
COMPND 6 SYNONYM: WASP;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: WASP (RESIDUES 242-310 AND 461-492);
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11A
KEYWDS ALPHA HELIX, BETA-HAIRPIN TURN, SIGNALING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR J.R.PETERSON,L.C.BICKFORD,D.MORGAN,A.S.KIM,O.OUERFELLI,M.W.KIRSCHNER,
AUTHOR 2 M.K.ROSEN
REVDAT 4 02-MAR-22 1T84 1 REMARK
REVDAT 3 24-FEB-09 1T84 1 VERSN
REVDAT 2 03-AUG-04 1T84 1 JRNL
REVDAT 1 13-JUL-04 1T84 0
JRNL AUTH J.R.PETERSON,L.C.BICKFORD,D.MORGAN,A.S.KIM,O.OUERFELLI,
JRNL AUTH 2 M.W.KIRSCHNER,M.K.ROSEN
JRNL TITL CHEMICAL INHIBITION OF N-WASP BY STABILIZATION OF A NATIVE
JRNL TITL 2 AUTOINHIBITED CONFORMATION.
JRNL REF NAT.STRUCT.MOL.BIOL. V. 11 747 2004
JRNL REFN ISSN 1545-9993
JRNL PMID 15235593
JRNL DOI 10.1038/NSMB796
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : NMRPIPE 1.7, ARIA 1
REMARK 3 AUTHORS : BAX (NMRPIPE), NILGES (ARIA)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL OF
REMARK 3 1466 RESTRAINTS. 1298 ARE NOE-DERIVED INTRAMOLECULAR DISTANCE
REMARK 3 RESTRAINTS; 30 ARE NOE-DERIVED INTERMOLECULAR DISTANCE
REMARK 3 RESTRAINTS; 138 ARE DIHEDRAL ANGLE RESTRAINTS.
REMARK 4
REMARK 4 1T84 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUN-04.
REMARK 100 THE DEPOSITION ID IS D_1000022430.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 5.0
REMARK 210 IONIC STRENGTH : 20MM
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 1MM WASP U-15N,13C; 1MM (S)
REMARK 210 -WISKOSTATIN
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : HCC-TOCSY; CCC-TOCSY; HCCH
REMARK 210 -TOCSY; 3D-13C-SEPARATED_NOESY_ALIPHATIC; 3D-13C-SEPARATED_NOESY_
REMARK 210 AROMATIC; 3D_15N-SEPARATED_NOESY; 4D_13C-SEPARATED_NOESY; 4D_13C/
REMARK 210 15N-SEPARATED_NOESY; 3D_13C-EDITED_12C-FILTERED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ
REMARK 210 SPECTROMETER MODEL : INOVA
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRVIEW 2.1.2, VNMR 6.1B, X-PLOR
REMARK 210 3.851, ARIA 1
REMARK 210 METHOD USED : SIMULATED ANNEALING; TORSION
REMARK 210 ANGLE DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST
REMARK 210 ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O GLU A 37 HG1 THR A 41 1.56
REMARK 500 O ASP A 42 H SER A 46 1.60
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 PRO A 13 68.39 -63.93
REMARK 500 1 GLN A 14 -70.65 -159.69
REMARK 500 1 ASN A 15 -70.45 -77.73
REMARK 500 1 THR A 41 33.64 -94.49
REMARK 500 1 SER A 75 49.09 176.91
REMARK 500 1 SER A 77 120.60 61.30
REMARK 500 1 GLU A 79 -160.30 -66.62
REMARK 500 1 LEU A 81 -54.06 80.33
REMARK 500 1 HIS A 97 46.42 -176.48
REMARK 500 1 ASP A 100 42.16 -104.59
REMARK 500 2 HIS A 8 76.06 74.69
REMARK 500 2 PRO A 13 85.19 -57.55
REMARK 500 2 GLN A 14 -77.78 172.92
REMARK 500 2 ASP A 18 64.77 -114.31
REMARK 500 2 ARG A 68 40.34 172.17
REMARK 500 2 SER A 75 41.08 77.70
REMARK 500 2 GLN A 76 79.89 -62.13
REMARK 500 2 SER A 77 90.53 60.56
REMARK 500 2 SER A 78 -163.04 52.85
REMARK 500 2 GLU A 79 -178.13 63.51
REMARK 500 2 LEU A 81 -33.73 171.89
REMARK 500 2 ALA A 95 101.56 -47.31
REMARK 500 3 VAL A 6 144.94 -178.93
REMARK 500 3 ASP A 18 46.03 -106.96
REMARK 500 3 GLN A 69 95.85 -63.92
REMARK 500 3 ALA A 95 112.95 59.86
REMARK 500 3 HIS A 97 63.81 -69.87
REMARK 500 3 ASP A 100 -69.76 68.94
REMARK 500 3 GLU A 101 -77.10 -95.92
REMARK 500 4 HIS A 8 88.90 71.69
REMARK 500 4 PRO A 13 63.00 -65.81
REMARK 500 4 GLN A 14 -82.33 -162.61
REMARK 500 4 PHE A 30 -60.23 -101.41
REMARK 500 4 ARG A 68 78.32 -173.62
REMARK 500 4 SER A 77 94.27 63.73
REMARK 500 4 ALA A 95 -90.89 -48.87
REMARK 500 4 ILE A 96 94.06 56.69
REMARK 500 4 HIS A 97 108.37 -47.87
REMARK 500 4 ASP A 100 -62.64 71.16
REMARK 500 5 HIS A 8 120.39 74.71
REMARK 500 5 GLN A 14 -84.38 -113.38
REMARK 500 5 ASP A 18 51.20 -91.81
REMARK 500 5 ASP A 42 104.41 -50.09
REMARK 500 5 SER A 75 66.52 -105.53
REMARK 500 5 GLN A 76 79.01 -100.34
REMARK 500 5 SER A 77 111.31 -172.84
REMARK 500 5 SER A 78 -162.50 -72.66
REMARK 500 5 ALA A 95 101.20 -55.46
REMARK 500 5 ASP A 100 -66.58 69.19
REMARK 500 5 GLU A 101 102.41 -174.04
REMARK 500
REMARK 500 THIS ENTRY HAS 207 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE WSK A 108
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1EJ5 RELATED DB: PDB
REMARK 900 UNLIGANDED WASP AUTOINHIBITED CORE DOMAIN
REMARK 900 RELATED ID: 1CEE RELATED DB: PDB
REMARK 900 GTPASE-BINDING DOMAIN OF WASP IN COMPLEX WITH CDC42
REMARK 999
REMARK 999 SEQUENCE
REMARK 999 THE POLYPROLINE REGION PRESENT IN THE ORIGINAL GENE SEQUENCE
REMARK 999 (RESIDUES 311-460) HAS BEEN REPLACED BY A HEXAPEPTIDE LINKER
REMARK 999 WITH THE SEQUENCE GLY-GLY-SER-GLY-GLY-SER.
DBREF 1T84 A 1 69 UNP P42768 WASP_HUMAN 242 310
DBREF 1T84 A 76 107 UNP P42768 WASP_HUMAN 361 492
SEQADV 1T84 GLY A 70 UNP P42768 SEE REMARK 999
SEQADV 1T84 GLY A 71 UNP P42768 SEE REMARK 999
SEQADV 1T84 SER A 72 UNP P42768 SEE REMARK 999
SEQADV 1T84 GLY A 73 UNP P42768 SEE REMARK 999
SEQADV 1T84 GLY A 74 UNP P42768 SEE REMARK 999
SEQADV 1T84 SER A 75 UNP P42768 SEE REMARK 999
SEQRES 1 A 107 SER GLY PHE LYS HIS VAL SER HIS VAL GLY TRP ASP PRO
SEQRES 2 A 107 GLN ASN GLY PHE ASP VAL ASN ASN LEU ASP PRO ASP LEU
SEQRES 3 A 107 ARG SER LEU PHE SER ARG ALA GLY ILE SER GLU ALA GLN
SEQRES 4 A 107 LEU THR ASP ALA GLU THR SER LYS LEU ILE TYR ASP PHE
SEQRES 5 A 107 ILE GLU ASP GLN GLY GLY LEU GLU ALA VAL ARG GLN GLU
SEQRES 6 A 107 MET ARG ARG GLN GLY GLY SER GLY GLY SER GLN SER SER
SEQRES 7 A 107 GLU GLY LEU VAL GLY ALA LEU MET HIS VAL MET GLN LYS
SEQRES 8 A 107 ARG SER ARG ALA ILE HIS SER SER ASP GLU GLY GLU ASP
SEQRES 9 A 107 GLN ALA GLY
HET WSK A 108 40
HETNAM WSK (2S)-1-(3,6-DIBROMO-9H-CARBAZOL-9-YL)-3-
HETNAM 2 WSK (DIMETHYLAMINO)PROPAN-2-OL
HETSYN WSK (S)-WISKOSTATIN
FORMUL 2 WSK C17 H18 BR2 N2 O
HELIX 1 1 ASP A 18 LEU A 22 5 5
HELIX 2 2 ASP A 23 GLY A 34 1 12
HELIX 3 3 SER A 36 THR A 41 1 6
HELIX 4 4 ASP A 42 GLN A 56 1 15
HELIX 5 5 GLY A 58 ARG A 67 1 10
HELIX 6 6 LEU A 81 ARG A 94 1 14
CISPEP 1 ASP A 12 PRO A 13 20 -7.94
SITE 1 AC1 12 VAL A 6 VAL A 9 GLY A 10 TRP A 11
SITE 2 AC1 12 PHE A 17 SER A 46 TYR A 50 ILE A 53
SITE 3 AC1 12 GLU A 54 GLY A 57 GLY A 58 LEU A 59
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 2 2 Bytes