Header list of 1stu.pdb file
Complete list - r 2 2 Bytes
HEADER DOUBLE STRANDED RNA BINDING DOMAIN 16-MAY-95 1STU
TITLE DOUBLE STRANDED RNA BINDING DOMAIN
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: MATERNAL EFFECT PROTEIN STAUFEN;
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES;
COMPND 5 OTHER_DETAILS: NMR, 20 STRUCTURES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER;
SOURCE 3 ORGANISM_COMMON: FRUIT FLY;
SOURCE 4 ORGANISM_TAXID: 7227;
SOURCE 5 ORGAN: FRUIT;
SOURCE 6 GENE: DOUBLE STRANDED RNA BINDING DO;
SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGET2T;
SOURCE 10 EXPRESSION_SYSTEM_GENE: DOUBLE STRANDED RNA BINDING DO
KEYWDS STAUFEN, DOUBLE STRANDED RNA BINDING DOMAIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.BYCROFT
REVDAT 3 02-MAR-22 1STU 1 REMARK
REVDAT 2 24-FEB-09 1STU 1 VERSN
REVDAT 1 31-JUL-95 1STU 0
JRNL AUTH M.BYCROFT,S.GRUNERT,A.G.MURZIN,M.PROCTOR,D.ST JOHNSTON
JRNL TITL NMR SOLUTION STRUCTURE OF A DSRNA BINDING DOMAIN FROM
JRNL TITL 2 DROSOPHILA STAUFEN PROTEIN REVEALS HOMOLOGY TO THE
JRNL TITL 3 N-TERMINAL DOMAIN OF RIBOSOMAL PROTEIN S5.
JRNL REF EMBO J. V. 14 3563 1995
JRNL REFN ISSN 0261-4189
JRNL PMID 7628456
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH D.ST.JOHNSTON,N.H.BROWN,J.G.GALL,M.JANTSCH
REMARK 1 TITL A CONSERVED DOUBLE-STRANDED RNA-BINDING DOMAIN
REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 89 10979 1992
REMARK 1 REFN ISSN 0027-8424
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : X-PLOR 3.0
REMARK 3 AUTHORS : BRUNGER
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1STU COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 100 THE DEPOSITION ID IS D_1000176516.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : NULL
REMARK 210 PH : NULL
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : NULL
REMARK 210 SAMPLE CONTENTS : NULL
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL
REMARK 210 SPECTROMETER FIELD STRENGTH : NULL
REMARK 210 SPECTROMETER MODEL : NULL
REMARK 210 SPECTROMETER MANUFACTURER : NULL
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NULL
REMARK 210 METHOD USED : NULL
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 HIS A 6 -38.89 -36.87
REMARK 500 1 ASN A 13 -15.49 155.46
REMARK 500 1 GLU A 23 42.58 -156.93
REMARK 500 1 GLU A 24 -169.12 -176.30
REMARK 500 1 ALA A 27 40.38 -174.73
REMARK 500 1 HIS A 28 73.58 164.40
REMARK 500 1 MET A 29 106.88 163.26
REMARK 500 1 LYS A 30 84.41 -68.30
REMARK 500 1 SER A 53 -29.98 -35.57
REMARK 500 1 MET A 61 -70.42 -65.15
REMARK 500 2 HIS A 6 -34.58 -35.15
REMARK 500 2 ASN A 13 -10.78 80.19
REMARK 500 2 GLU A 24 63.20 34.91
REMARK 500 2 ALA A 27 81.17 -167.57
REMARK 500 2 HIS A 28 34.98 -156.53
REMARK 500 2 MET A 29 30.49 39.85
REMARK 500 2 LYS A 30 -98.51 -68.03
REMARK 500 2 LYS A 50 -174.51 45.90
REMARK 500 2 LYS A 51 89.02 -63.95
REMARK 500 2 VAL A 52 -158.17 -146.64
REMARK 500 2 SER A 53 -57.93 84.38
REMARK 500 2 MET A 61 -71.46 -65.78
REMARK 500 3 HIS A 6 -39.12 -36.46
REMARK 500 3 ASN A 13 -4.82 72.68
REMARK 500 3 THR A 15 158.46 -44.59
REMARK 500 3 PRO A 26 -73.18 -59.52
REMARK 500 3 ALA A 27 36.02 -165.78
REMARK 500 3 HIS A 28 22.68 -163.24
REMARK 500 3 MET A 29 85.04 170.82
REMARK 500 3 ASN A 48 -17.71 148.00
REMARK 500 3 LYS A 55 -81.26 -57.39
REMARK 500 3 ARG A 56 -66.48 -29.26
REMARK 500 3 MET A 61 -73.10 -68.48
REMARK 500 4 ILE A 2 -55.58 81.43
REMARK 500 4 VAL A 5 -77.08 -49.51
REMARK 500 4 HIS A 6 -41.96 -28.92
REMARK 500 4 ASN A 13 -10.98 80.22
REMARK 500 4 THR A 15 174.62 -50.50
REMARK 500 4 ARG A 22 154.87 162.82
REMARK 500 4 PRO A 26 -81.12 -62.92
REMARK 500 4 ALA A 27 77.78 -156.50
REMARK 500 4 HIS A 28 58.86 -153.98
REMARK 500 4 LYS A 30 -161.11 -58.35
REMARK 500 4 ASN A 48 88.82 -48.97
REMARK 500 4 LYS A 50 57.92 97.94
REMARK 500 4 LYS A 51 59.91 72.57
REMARK 500 4 VAL A 52 -41.32 -164.64
REMARK 500 4 SER A 53 -74.67 -33.49
REMARK 500 4 GLU A 64 -72.81 -53.88
REMARK 500 5 HIS A 6 -34.28 -34.70
REMARK 500
REMARK 500 THIS ENTRY HAS 230 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 1 ARG A 22 0.21 SIDE CHAIN
REMARK 500 1 ARG A 56 0.13 SIDE CHAIN
REMARK 500 2 ARG A 12 0.21 SIDE CHAIN
REMARK 500 2 ARG A 22 0.23 SIDE CHAIN
REMARK 500 2 ARG A 56 0.27 SIDE CHAIN
REMARK 500 3 ARG A 12 0.31 SIDE CHAIN
REMARK 500 3 ARG A 22 0.28 SIDE CHAIN
REMARK 500 3 ARG A 56 0.21 SIDE CHAIN
REMARK 500 4 ARG A 12 0.31 SIDE CHAIN
REMARK 500 4 ARG A 22 0.21 SIDE CHAIN
REMARK 500 4 ARG A 56 0.30 SIDE CHAIN
REMARK 500 5 ARG A 12 0.21 SIDE CHAIN
REMARK 500 5 ARG A 22 0.31 SIDE CHAIN
REMARK 500 5 ARG A 56 0.32 SIDE CHAIN
REMARK 500 6 ARG A 12 0.27 SIDE CHAIN
REMARK 500 6 ARG A 22 0.16 SIDE CHAIN
REMARK 500 6 ARG A 56 0.20 SIDE CHAIN
REMARK 500 7 ARG A 12 0.21 SIDE CHAIN
REMARK 500 7 ARG A 22 0.20 SIDE CHAIN
REMARK 500 7 ARG A 56 0.31 SIDE CHAIN
REMARK 500 8 ARG A 12 0.30 SIDE CHAIN
REMARK 500 8 ARG A 22 0.24 SIDE CHAIN
REMARK 500 8 ARG A 56 0.32 SIDE CHAIN
REMARK 500 9 ARG A 12 0.30 SIDE CHAIN
REMARK 500 9 ARG A 22 0.31 SIDE CHAIN
REMARK 500 9 ARG A 56 0.12 SIDE CHAIN
REMARK 500 10 ARG A 12 0.18 SIDE CHAIN
REMARK 500 10 ARG A 22 0.28 SIDE CHAIN
REMARK 500 10 ARG A 56 0.32 SIDE CHAIN
REMARK 500 11 ARG A 12 0.30 SIDE CHAIN
REMARK 500 11 ARG A 22 0.31 SIDE CHAIN
REMARK 500 11 ARG A 56 0.23 SIDE CHAIN
REMARK 500 12 ARG A 12 0.26 SIDE CHAIN
REMARK 500 12 ARG A 22 0.22 SIDE CHAIN
REMARK 500 12 ARG A 56 0.27 SIDE CHAIN
REMARK 500 13 ARG A 12 0.32 SIDE CHAIN
REMARK 500 13 ARG A 22 0.22 SIDE CHAIN
REMARK 500 13 ARG A 56 0.32 SIDE CHAIN
REMARK 500 14 ARG A 12 0.32 SIDE CHAIN
REMARK 500 14 ARG A 22 0.32 SIDE CHAIN
REMARK 500 14 ARG A 56 0.31 SIDE CHAIN
REMARK 500 15 ARG A 12 0.31 SIDE CHAIN
REMARK 500 15 ARG A 22 0.32 SIDE CHAIN
REMARK 500 15 ARG A 56 0.26 SIDE CHAIN
REMARK 500 16 ARG A 12 0.29 SIDE CHAIN
REMARK 500 16 ARG A 22 0.31 SIDE CHAIN
REMARK 500 16 ARG A 56 0.30 SIDE CHAIN
REMARK 500 17 ARG A 12 0.32 SIDE CHAIN
REMARK 500 17 ARG A 22 0.21 SIDE CHAIN
REMARK 500 17 ARG A 56 0.23 SIDE CHAIN
REMARK 500
REMARK 500 THIS ENTRY HAS 59 PLANE DEVIATIONS.
REMARK 500
REMARK 500 REMARK: NULL
DBREF 1STU A 1 68 UNP P25159 STAU_DROME 579 646
SEQRES 1 A 68 PRO ILE SER GLN VAL HIS GLU ILE GLY ILE LYS ARG ASN
SEQRES 2 A 68 MET THR VAL HIS PHE LYS VAL LEU ARG GLU GLU GLY PRO
SEQRES 3 A 68 ALA HIS MET LYS ASN PHE ILE THR ALA CYS ILE VAL GLY
SEQRES 4 A 68 SER ILE VAL THR GLU GLY GLU GLY ASN GLY LYS LYS VAL
SEQRES 5 A 68 SER LYS LYS ARG ALA ALA GLU LYS MET LEU VAL GLU LEU
SEQRES 6 A 68 GLN LYS LEU
HELIX 1 1 ILE A 2 ARG A 12 1 11
HELIX 2 2 VAL A 52 GLN A 66 1 15
SHEET 1 A 3 HIS A 17 VAL A 20 0
SHEET 2 A 3 ASN A 31 VAL A 38 -1 N ILE A 37 O HIS A 17
SHEET 3 A 3 ILE A 41 ASN A 48 -1 N GLY A 47 O PHE A 32
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 2 2 Bytes