Header list of 1shp.pdb file
Complete list - r 2 2 Bytes
HEADER PROTEINASE INHIBITOR(TRYPSIN) 17-NOV-92 1SHP
TITLE THE NMR SOLUTION STRUCTURE OF A KUNITZ-TYPE PROTEINASE INHIBITOR FROM
TITLE 2 THE SEA ANEMONE STICHODACTYLA HELIANTHUS
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: TRYPSIN INHIBITOR;
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: STICHODACTYLA HELIANTHUS;
SOURCE 3 ORGANISM_TAXID: 6123
KEYWDS PROTEINASE INHIBITOR(TRYPSIN)
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR W.ANTUCH,K.BERNDT,M.CHAVEZ,J.DELFIN,K.WUTHRICH
REVDAT 3 02-MAR-22 1SHP 1 REMARK
REVDAT 2 24-FEB-09 1SHP 1 VERSN
REVDAT 1 31-JAN-94 1SHP 0
JRNL AUTH W.ANTUCH,K.D.BERNDT,M.A.CHAVEZ,J.DELFIN,K.WUTHRICH
JRNL TITL THE NMR SOLUTION STRUCTURE OF A KUNITZ-TYPE PROTEINASE
JRNL TITL 2 INHIBITOR FROM THE SEA ANEMONE STICHODACTYLA HELIANTHUS.
JRNL REF EUR.J.BIOCHEM. V. 212 675 1993
JRNL REFN ISSN 0014-2956
JRNL PMID 8462542
JRNL DOI 10.1111/J.1432-1033.1993.TB17705.X
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH W.ANTUCH,R.DOMINGUEZ,R.RODRIGUEZ,J.DELFIN,V.MORERA,J.DIAZ,
REMARK 1 AUTH 2 M.CHAVEZ,O.DIDEBERG,G.PADRON
REMARK 1 TITL AMINO ACID SEQUENCE AND THREE-DIMENSIONAL MODEL OF A SERINE
REMARK 1 TITL 2 PROTEINASE INHIBITOR FROM STICHODACTYLA HELIANTHUS
REMARK 1 REF TO BE PUBLISHED
REMARK 1 REFN
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : DIANA, OPAL
REMARK 3 AUTHORS : GUNTERT,BRAUN,WUTHRICH (DIANA),
REMARK 3 LUGINBUHL,GUNTERT,BILLETER,WUTHRICH (OPAL)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1SHP COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 100 THE DEPOSITION ID IS D_1000176378.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : NULL
REMARK 210 PH : NULL
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : NULL
REMARK 210 SAMPLE CONTENTS : NULL
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL
REMARK 210 SPECTROMETER FIELD STRENGTH : NULL
REMARK 210 SPECTROMETER MODEL : NULL
REMARK 210 SPECTROMETER MANUFACTURER : NULL
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NULL
REMARK 210 METHOD USED : NULL
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 7 CYS A 36 CA - CB - SG ANGL. DEV. = 7.6 DEGREES
REMARK 500 8 ARG A 18 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES
REMARK 500 11 CYS A 12 CA - CB - SG ANGL. DEV. = 7.2 DEGREES
REMARK 500 12 ARG A 18 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES
REMARK 500 14 CYS A 36 CA - CB - SG ANGL. DEV. = 7.7 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 VAL A 9 -85.50 -75.45
REMARK 500 1 TYR A 33 -77.42 -85.93
REMARK 500 1 ASN A 39 -169.25 -118.79
REMARK 500 1 ARG A 50 -72.68 -73.83
REMARK 500 2 VAL A 9 -87.24 -100.00
REMARK 500 2 ASN A 42 63.48 -154.92
REMARK 500 2 ARG A 54 -152.45 -111.49
REMARK 500 3 LYS A 7 139.13 -39.87
REMARK 500 3 VAL A 9 -60.97 -136.70
REMARK 500 3 ARG A 54 -156.82 -117.75
REMARK 500 4 VAL A 9 -87.17 -80.87
REMARK 500 4 ARG A 11 47.55 37.25
REMARK 500 4 LYS A 13 58.86 -140.33
REMARK 500 4 ASN A 42 76.75 -154.75
REMARK 500 5 VAL A 9 -71.09 -74.11
REMARK 500 5 ARG A 11 37.28 -79.01
REMARK 500 5 CYS A 36 -159.18 -141.95
REMARK 500 5 ASN A 39 -173.42 168.66
REMARK 500 5 ASN A 42 88.12 -163.15
REMARK 500 6 VAL A 9 -86.02 -75.51
REMARK 500 6 ARG A 11 -55.47 65.16
REMARK 500 6 ASN A 39 -163.10 -117.17
REMARK 500 6 ASN A 42 78.57 -155.29
REMARK 500 6 ARG A 50 -70.41 -62.14
REMARK 500 6 ARG A 54 -154.83 -129.09
REMARK 500 7 LYS A 7 134.07 -36.54
REMARK 500 7 ARG A 11 -52.52 65.66
REMARK 500 7 CYS A 36 -131.11 -113.34
REMARK 500 8 LYS A 13 45.84 -106.28
REMARK 500 8 ARG A 54 118.25 67.56
REMARK 500 9 LYS A 8 69.74 -154.92
REMARK 500 9 ARG A 11 55.11 -154.15
REMARK 500 9 ARG A 54 -151.68 -125.97
REMARK 500 10 ASN A 39 -163.32 -160.38
REMARK 500 10 ASN A 42 78.24 -159.09
REMARK 500 10 CYS A 53 -54.51 -147.94
REMARK 500 11 CYS A 36 -156.93 -125.57
REMARK 500 11 ASN A 39 -174.13 -177.85
REMARK 500 11 ASN A 42 69.39 -154.90
REMARK 500 12 VAL A 9 -72.45 -90.73
REMARK 500 12 ASN A 42 66.12 -151.00
REMARK 500 13 CYS A 36 -160.71 -110.87
REMARK 500 13 ASN A 39 -169.80 -172.23
REMARK 500 13 ARG A 54 -151.23 -104.30
REMARK 500 14 ASN A 42 60.69 -158.05
REMARK 500 15 VAL A 9 -84.46 -120.89
REMARK 500 15 ASN A 42 97.16 -162.07
REMARK 500 15 ARG A 54 118.42 66.99
REMARK 500 16 LYS A 7 133.67 -34.05
REMARK 500 16 ASN A 42 87.91 -159.44
REMARK 500
REMARK 500 THIS ENTRY HAS 63 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS
REMARK 500
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH
REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED
REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.
REMARK 500 MODEL OMEGA
REMARK 500 LYS A 27 CYS A 28 1 148.03
REMARK 500 PRO A 6 LYS A 7 3 149.60
REMARK 500 ARG A 54 ALA A 55 3 148.00
REMARK 500 ASN A 41 ASN A 42 4 -148.60
REMARK 500 ARG A 54 ALA A 55 5 139.40
REMARK 500 ARG A 54 ALA A 55 13 148.76
REMARK 500 ASN A 41 ASN A 42 16 -146.91
REMARK 500 SER A 1 ILE A 2 18 -147.05
REMARK 500 ARG A 54 ALA A 55 20 117.86
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 1 ARG A 18 0.15 SIDE CHAIN
REMARK 500 1 ARG A 54 0.14 SIDE CHAIN
REMARK 500 2 TYR A 15 0.07 SIDE CHAIN
REMARK 500 2 ARG A 18 0.08 SIDE CHAIN
REMARK 500 2 PHE A 21 0.08 SIDE CHAIN
REMARK 500 2 ARG A 54 0.19 SIDE CHAIN
REMARK 500 3 ARG A 18 0.10 SIDE CHAIN
REMARK 500 3 PHE A 31 0.10 SIDE CHAIN
REMARK 500 3 TYR A 33 0.11 SIDE CHAIN
REMARK 500 4 ARG A 18 0.15 SIDE CHAIN
REMARK 500 4 HIS A 47 0.08 SIDE CHAIN
REMARK 500 5 TYR A 15 0.07 SIDE CHAIN
REMARK 500 5 ARG A 18 0.11 SIDE CHAIN
REMARK 500 5 ARG A 54 0.14 SIDE CHAIN
REMARK 500 6 ARG A 18 0.12 SIDE CHAIN
REMARK 500 6 TYR A 20 0.07 SIDE CHAIN
REMARK 500 6 TYR A 33 0.08 SIDE CHAIN
REMARK 500 7 TYR A 20 0.11 SIDE CHAIN
REMARK 500 7 PHE A 21 0.11 SIDE CHAIN
REMARK 500 8 TYR A 20 0.07 SIDE CHAIN
REMARK 500 8 TYR A 33 0.08 SIDE CHAIN
REMARK 500 9 ARG A 18 0.14 SIDE CHAIN
REMARK 500 10 ARG A 18 0.17 SIDE CHAIN
REMARK 500 10 PHE A 21 0.11 SIDE CHAIN
REMARK 500 11 ARG A 18 0.18 SIDE CHAIN
REMARK 500 12 PHE A 31 0.09 SIDE CHAIN
REMARK 500 13 TYR A 33 0.07 SIDE CHAIN
REMARK 500 14 ARG A 18 0.08 SIDE CHAIN
REMARK 500 14 TYR A 33 0.07 SIDE CHAIN
REMARK 500 15 ARG A 18 0.17 SIDE CHAIN
REMARK 500 15 TYR A 20 0.08 SIDE CHAIN
REMARK 500 16 ARG A 18 0.17 SIDE CHAIN
REMARK 500 16 TYR A 33 0.07 SIDE CHAIN
REMARK 500 17 ARG A 18 0.17 SIDE CHAIN
REMARK 500 17 TYR A 20 0.07 SIDE CHAIN
REMARK 500 18 TYR A 33 0.09 SIDE CHAIN
REMARK 500 19 ARG A 18 0.10 SIDE CHAIN
REMARK 500 19 PHE A 31 0.09 SIDE CHAIN
REMARK 500 19 ARG A 50 0.12 SIDE CHAIN
REMARK 500 20 TYR A 20 0.08 SIDE CHAIN
REMARK 500 20 TYR A 33 0.07 SIDE CHAIN
REMARK 500 20 ARG A 54 0.09 SIDE CHAIN
REMARK 500
REMARK 500 REMARK: NULL
DBREF 1SHP A 1 55 UNP P31713 ISH1_STOHE 1 55
SEQRES 1 A 55 SER ILE CYS SER GLU PRO LYS LYS VAL GLY ARG CYS LYS
SEQRES 2 A 55 GLY TYR PHE PRO ARG PHE TYR PHE ASP SER GLU THR GLY
SEQRES 3 A 55 LYS CYS THR PRO PHE ILE TYR GLY GLY CYS GLY GLY ASN
SEQRES 4 A 55 GLY ASN ASN PHE GLU THR LEU HIS GLN CYS ARG ALA ILE
SEQRES 5 A 55 CYS ARG ALA
HELIX 1 H1 SER A 1 GLU A 5 5ALL DONORS,ACCEPTORS INCLUDED 5
HELIX 2 H2 THR A 45 ARG A 54 1ALL DONORS,ACCEPTORS INCLUDED 10
SHEET 1 S1 3 LYS A 27 TYR A 33 0
SHEET 2 S1 3 PHE A 16 ASP A 22 -1 N PHE A 16 O TYR A 33
SHEET 3 S1 3 PHE A 43 PHE A 43 -1 N PHE A 43 O PHE A 19
SSBOND 1 CYS A 3 CYS A 53 1555 1555 2.09
SSBOND 2 CYS A 12 CYS A 36 1555 1555 2.09
SSBOND 3 CYS A 28 CYS A 49 1555 1555 2.08
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 2 2 Bytes