Header list of 1se7.pdb file
Complete list - 2 20 Bytes
HEADER TRANSFERASE 16-FEB-04 1SE7
TITLE SOLUTION STRUCTURE OF THE E. COLI BACTERIOPHAGE P1 ENCODED HOT
TITLE 2 PROTEIN: A HOMOLOGUE OF THE THETA SUBUNIT OF E. COLI DNA POLYMERASE
TITLE 3 III
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: HOMOLOGUE OF THE THETA SUBUNIT OF DNA POLYMERASE III;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: HOT;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE P1;
SOURCE 3 ORGANISM_TAXID: 10678;
SOURCE 4 GENE: HOT;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BLR(DE3);
SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET30HOT
KEYWDS E. COLI BACTERIOPHAGE P1, HOMOLOGUE OF THETA, HOT, E. COLI DNA
KEYWDS 2 POLYMERASE III, TRANSFERASE
EXPDTA SOLUTION NMR
NUMMDL 7
AUTHOR E.F.DEROSE,T.W.KIRBY,G.A.MUELLER,A.K.CHIKOVA,R.M.SCHAAPER,R.E.LONDON
REVDAT 3 02-MAR-22 1SE7 1 REMARK
REVDAT 2 24-FEB-09 1SE7 1 VERSN
REVDAT 1 14-DEC-04 1SE7 0
JRNL AUTH E.F.DEROSE,T.W.KIRBY,G.A.MUELLER,A.K.CHIKOVA,R.M.SCHAAPER,
JRNL AUTH 2 R.E.LONDON
JRNL TITL PHAGE LIKE IT HOT: SOLUTION STRUCTURE OF THE BACTERIOPHAGE
JRNL TITL 2 P1-ENCODED HOT PROTEIN, A HOMOLOG OF THE THETA SUBUNIT OF E.
JRNL TITL 3 COLI DNA POLYMERASE III
JRNL REF STRUCTURE V. 12 2221 2004
JRNL REFN ISSN 0969-2126
JRNL PMID 15576035
JRNL DOI 10.1016/J.STR.2004.09.019
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : NMRPIPE 2.1 REV 2002.044.17.08, CNS 1.1
REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE
REMARK 3 -KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE,
REMARK 3 SIMONSON,WARREN (CNS)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES WERE COMPUTED USING
REMARK 3 DEFAULT ARIA PARAMETERS, WITH QRELAX SET TO FALSE. 430 MANUALLY
REMARK 3 ASSIGNED NOE DISTANCE RESTRAINTS WERE INCLUDED, AND QSHIFT AND
REMARK 3 QEXCLUDE WERE SET TO FALSE FOR THE MANUALLY ASSIGNED NOES. ARIA
REMARK 3 ASSIGNED 1140 UNAMBIGUOUS AND 435 AMBIGUOUS NOE DISTANCE
REMARK 3 RESTRAINTS. 51 DIHEDRAL RESTRAINTS, 46 HYDROGEN BOND RESTRAINTS,
REMARK 3 AND 36 BACKBONE AMIDE RESIDUAL DIPOLAR COUPLINGS WERE ALSO USED
REMARK 3 IN THE CALCULATION.
REMARK 4
REMARK 4 1SE7 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-FEB-04.
REMARK 100 THE DEPOSITION ID IS D_1000021633.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 7
REMARK 210 IONIC STRENGTH : 100MM NACL
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 1.3MM U-[13C,15N] PROTEIN, 5MM
REMARK 210 TRIS, 100MM NACL, 5MM NAN3
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N
REMARK 210 -SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ
REMARK 210 SPECTROMETER MODEL : INOVA
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRVIEW 5.0.4, ARIA 1.2, CNS 1.1
REMARK 210 METHOD USED : SIMULATED ANNEALING, MOLECULAR
REMARK 210 DYNAMICS, TORSION ANGLE DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 20
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 7
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST
REMARK 210 ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR
REMARK 210 SPECTROSCOPY.
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 TYR A 2 -163.78 56.65
REMARK 500 1 TRP A 4 -21.79 -148.86
REMARK 500 1 ASN A 5 38.06 -88.10
REMARK 500 1 LEU A 32 -86.70 -78.57
REMARK 500 1 ASN A 33 20.20 178.24
REMARK 500 1 LEU A 67 170.02 -44.29
REMARK 500 1 PRO A 68 -156.49 -58.84
REMARK 500 1 LYS A 69 163.69 -45.62
REMARK 500 1 SER A 71 79.97 -178.60
REMARK 500 1 ASP A 78 8.38 58.99
REMARK 500 1 ASP A 79 18.28 59.07
REMARK 500 1 ALA A 80 -64.83 -94.73
REMARK 500 2 TYR A 2 -170.71 57.67
REMARK 500 2 TRP A 4 -12.24 -160.12
REMARK 500 2 ASN A 5 38.75 -81.88
REMARK 500 2 LYS A 9 -50.70 -120.74
REMARK 500 2 LEU A 32 -140.17 73.36
REMARK 500 2 GLU A 44 -69.71 -121.21
REMARK 500 2 ASN A 48 -6.74 -58.01
REMARK 500 2 LEU A 67 165.47 -43.62
REMARK 500 2 PRO A 68 -100.62 -69.00
REMARK 500 2 SER A 71 -145.56 -128.77
REMARK 500 2 ALA A 74 37.35 -90.53
REMARK 500 2 ASP A 79 -27.12 -143.39
REMARK 500 2 VAL A 81 74.06 47.55
REMARK 500 3 TRP A 4 -7.79 -151.34
REMARK 500 3 ASN A 5 33.63 -90.47
REMARK 500 3 ALA A 7 30.56 -94.52
REMARK 500 3 SER A 10 -162.66 -68.69
REMARK 500 3 GLN A 11 -63.92 -100.84
REMARK 500 3 GLU A 30 9.21 -65.25
REMARK 500 3 ARG A 31 -61.69 -123.05
REMARK 500 3 LEU A 32 -141.80 -103.03
REMARK 500 3 ASN A 33 74.50 -111.42
REMARK 500 3 GLN A 45 76.68 52.78
REMARK 500 3 LEU A 67 171.45 -49.20
REMARK 500 3 LYS A 69 132.74 57.86
REMARK 500 3 ASP A 79 -72.53 -120.86
REMARK 500 3 ALA A 80 76.43 -172.49
REMARK 500 4 TRP A 4 151.90 173.61
REMARK 500 4 GLU A 30 7.37 -66.36
REMARK 500 4 ARG A 31 -63.75 -122.18
REMARK 500 4 LEU A 32 -132.08 -91.68
REMARK 500 4 GLU A 44 -69.18 -120.98
REMARK 500 4 PRO A 68 -165.55 -64.76
REMARK 500 4 LYS A 69 -113.76 56.60
REMARK 500 4 GLN A 76 170.59 -54.99
REMARK 500 4 ASP A 79 -70.02 -66.74
REMARK 500 4 ALA A 80 -19.50 -172.72
REMARK 500 5 TRP A 4 -19.87 -150.87
REMARK 500
REMARK 500 THIS ENTRY HAS 89 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
DBREF 1SE7 A 1 83 UNP Q71T70 Q71T70_BPP1 5 87
SEQRES 1 A 83 MET TYR ASP TRP ASN ILE ALA ALA LYS SER GLN GLU GLU
SEQRES 2 A 83 ARG ASP LYS VAL ASN VAL ASP LEU ALA ALA SER GLY VAL
SEQRES 3 A 83 ALA TYR LYS GLU ARG LEU ASN ILE PRO VAL ILE ALA GLU
SEQRES 4 A 83 GLN VAL ALA ARG GLU GLN PRO GLU ASN LEU ARG THR TYR
SEQRES 5 A 83 PHE MET GLU ARG LEU ARG HIS TYR ARG GLN LEU SER LEU
SEQRES 6 A 83 GLN LEU PRO LYS GLY SER ASP PRO ALA TYR GLN LYS ASP
SEQRES 7 A 83 ASP ALA VAL LYS LYS
HELIX 1 1 SER A 10 LEU A 32 1 23
HELIX 2 2 ILE A 37 ARG A 43 1 7
HELIX 3 3 PRO A 46 ASN A 48 5 3
HELIX 4 4 LEU A 49 LEU A 67 1 19
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - 2 20 Bytes