Header list of 1q1o.pdb file
Complete list - r 2 2 Bytes
HEADER SIGNALING PROTEIN 22-JUL-03 1Q1O
TITLE SOLUTION STRUCTURE OF THE PB1 DOMAIN OF CDC24P (LONG FORM)
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: CELL DIVISION CONTROL PROTEIN 24;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: PB1 DOMAIN (LONG FORM);
COMPND 5 SYNONYM: CDC24P, CALCIUM REGULATORY PROTEIN;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE;
SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST;
SOURCE 4 ORGANISM_TAXID: 4932;
SOURCE 5 GENE: CDC24P;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX6P-1
KEYWDS PB1 DOMAIN, PCCR, PC MOTIF, OPCA MOTIF, YEAST, CELL POLARITY,
KEYWDS 2 PROTEIN-PROTEIN INTERACTION, SIGNALING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR S.YOSHINAGA,M.KOHJIMA,K.OGURA,M.YOKOCHI,R.TAKEYA,T.ITO,H.SUMIMOTO,
AUTHOR 2 F.INAGAKI
REVDAT 3 02-MAR-22 1Q1O 1 REMARK SEQADV
REVDAT 2 24-FEB-09 1Q1O 1 VERSN
REVDAT 1 14-OCT-03 1Q1O 0
JRNL AUTH S.YOSHINAGA,M.KOHJIMA,K.OGURA,M.YOKOCHI,R.TAKEYA,T.ITO,
JRNL AUTH 2 H.SUMIMOTO,F.INAGAKI
JRNL TITL THE PB1 DOMAIN AND THE PC MOTIF-CONTAINING REGION ARE
JRNL TITL 2 STRUCTURALLY SIMILAR PROTEIN BINDING MODULES
JRNL REF EMBO J. V. 22 4888 2003
JRNL REFN ISSN 0261-4189
JRNL PMID 14517229
JRNL DOI 10.1093/EMBOJ/CDG475
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : VNMR, ARIA
REMARK 3 AUTHORS : J.P.LINGE, S.I.O'DONOGHUE, M.NILGES (ARIA)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1Q1O COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-JUL-03.
REMARK 100 THE DEPOSITION ID IS D_1000019804.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 6.3
REMARK 210 IONIC STRENGTH : 50MM POTASSIUM PHOSPHATE BUFFER;
REMARK 210 150MM SODIUM CHLORIDE
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 1MM CDC24P PB1 U-15N ,13C; 50MM
REMARK 210 POTASSIUM PHOSPHATE BUFFER;
REMARK 210 150MM SODIUM CHLORIDE; 1MM
REMARK 210 SODIUM AZIDE; 90% H2O, 10% D2O;
REMARK 210 1MM CDC24P PB1 U-15N, 13C; 50MM
REMARK 210 POTASSIUM PHOSPHATE BUFFER;
REMARK 210 150MM SODIUM CHLORIDE; 1MM
REMARK 210 SODIUM AZIDE; 100% D2O
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C
REMARK 210 -SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 500 MHZ
REMARK 210 SPECTROMETER MODEL : UNITYPLUS; INOVA
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRPIPE, OLIVIA, ARIA, CNS
REMARK 210 METHOD USED : SIMULATED ANNEALING
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST
REMARK 210 ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 SER A 772 88.01 56.94
REMARK 500 1 SER A 776 -16.03 -161.15
REMARK 500 1 SER A 777 85.32 56.24
REMARK 500 1 THR A 814 11.79 -144.28
REMARK 500 1 GLU A 846 -171.72 -66.71
REMARK 500 1 LYS A 847 -27.95 -157.78
REMARK 500 2 SER A 761 -168.41 -121.40
REMARK 500 2 ASN A 773 78.73 58.47
REMARK 500 2 THR A 775 -70.88 -134.70
REMARK 500 2 SER A 776 54.39 -151.72
REMARK 500 2 SER A 803 59.63 -103.12
REMARK 500 2 ASN A 804 -41.93 -141.54
REMARK 500 2 HIS A 806 -168.65 -76.91
REMARK 500 2 ASN A 807 -72.03 -59.39
REMARK 500 2 ASN A 808 -74.74 -140.79
REMARK 500 2 PRO A 812 176.84 -57.84
REMARK 500 2 LYS A 815 93.19 -165.90
REMARK 500 2 ASP A 820 -164.72 -113.27
REMARK 500 2 LYS A 847 -28.04 -147.69
REMARK 500 3 SER A 761 174.77 60.99
REMARK 500 3 ASN A 771 -159.90 -109.52
REMARK 500 3 SER A 772 -55.00 -130.18
REMARK 500 3 SER A 776 105.75 -166.87
REMARK 500 3 SER A 777 18.99 -145.27
REMARK 500 3 ASN A 804 -35.02 -174.58
REMARK 500 3 THR A 805 -161.60 -101.70
REMARK 500 3 HIS A 806 -165.85 59.31
REMARK 500 3 ASN A 808 -85.00 -124.50
REMARK 500 3 ASN A 809 136.50 -171.28
REMARK 500 3 THR A 814 -56.00 -148.08
REMARK 500 3 ASN A 845 14.92 59.11
REMARK 500 4 ASN A 771 -78.12 -105.98
REMARK 500 4 SER A 772 -68.59 -158.53
REMARK 500 4 ASN A 773 -4.27 -168.49
REMARK 500 4 SER A 776 -167.91 57.16
REMARK 500 4 ASN A 804 -32.95 -164.25
REMARK 500 4 PRO A 812 -176.74 -66.67
REMARK 500 4 ASN A 845 16.56 58.24
REMARK 500 5 SER A 761 -177.38 59.64
REMARK 500 5 SER A 772 92.16 -162.96
REMARK 500 5 ASN A 774 -163.88 54.38
REMARK 500 5 SER A 776 88.23 -157.65
REMARK 500 5 SER A 777 159.50 63.67
REMARK 500 5 ASN A 808 7.38 -164.08
REMARK 500 6 PRO A 758 -90.35 -71.52
REMARK 500 6 LEU A 759 -30.31 -157.12
REMARK 500 6 SER A 772 -170.72 57.26
REMARK 500 6 ASN A 773 86.65 55.50
REMARK 500 6 ASN A 774 -170.11 59.53
REMARK 500 6 SER A 776 -56.65 -161.55
REMARK 500
REMARK 500 THIS ENTRY HAS 166 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1IP9 RELATED DB: PDB
REMARK 900 THE SAME DOMAIN FAMILY AND THE BINDING PARTNER
REMARK 900 RELATED ID: 1IPG RELATED DB: PDB
REMARK 900 THE SAME DOMAIN FAMILY AND THE BINDING PARTNER
DBREF 1Q1O A 761 854 UNP P11433 CDC24_YEAST 761 854
SEQADV 1Q1O GLY A 757 UNP P11433 CLONING ARTIFACT
SEQADV 1Q1O PRO A 758 UNP P11433 CLONING ARTIFACT
SEQADV 1Q1O LEU A 759 UNP P11433 CLONING ARTIFACT
SEQADV 1Q1O GLY A 760 UNP P11433 CLONING ARTIFACT
SEQRES 1 A 98 GLY PRO LEU GLY SER ILE LEU PHE ARG ILE SER TYR ASN
SEQRES 2 A 98 ASN ASN SER ASN ASN THR SER SER SER GLU ILE PHE THR
SEQRES 3 A 98 LEU LEU VAL GLU LYS VAL TRP ASN PHE ASP ASP LEU ILE
SEQRES 4 A 98 MET ALA ILE ASN SER LYS ILE SER ASN THR HIS ASN ASN
SEQRES 5 A 98 ASN ILE SER PRO ILE THR LYS ILE LYS TYR GLN ASP GLU
SEQRES 6 A 98 ASP GLY ASP PHE VAL VAL LEU GLY SER ASP GLU ASP TRP
SEQRES 7 A 98 ASN VAL ALA LYS GLU MET LEU ALA GLU ASN ASN GLU LYS
SEQRES 8 A 98 PHE LEU ASN ILE ARG LEU TYR
HELIX 1 1 ASN A 790 HIS A 806 1 17
HELIX 2 2 SER A 830 ASN A 844 1 15
SHEET 1 A 5 GLU A 779 VAL A 785 0
SHEET 2 A 5 ILE A 762 TYR A 768 -1 N ILE A 762 O VAL A 785
SHEET 3 A 5 PHE A 848 LEU A 853 1 O LEU A 849 N ARG A 765
SHEET 4 A 5 ILE A 816 GLN A 819 -1 N LYS A 817 O ARG A 852
SHEET 5 A 5 PHE A 825 LEU A 828 -1 O VAL A 826 N TYR A 818
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 2 2 Bytes