Header list of 1ovx.pdb file
Complete list - 25 20 Bytes
HEADER METAL BINDING PROTEIN 27-MAR-03 1OVX
TITLE NMR STRUCTURE OF THE E. COLI CLPX CHAPERONE ZINC BINDING DOMAIN DIMER
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX;
COMPND 3 CHAIN: A, B;
COMPND 4 FRAGMENT: N-TERMINAL DOMAIN (RESIDUES 1-60);
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;
SOURCE 3 ORGANISM_TAXID: 83333;
SOURCE 4 STRAIN: K12;
SOURCE 5 GENE: CLPX;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28
KEYWDS TREBLE CLEF ZINC FINGER, HOMODIMER, METAL BINDING PROTEIN
EXPDTA SOLUTION NMR
AUTHOR L.W.DONALDSON,J.KWAN,U.WOJTYRA,W.A.HOURY
REVDAT 3 13-JUL-11 1OVX 1 VERSN
REVDAT 2 24-FEB-09 1OVX 1 VERSN
REVDAT 1 30-DEC-03 1OVX 0
JRNL AUTH L.W.DONALDSON,U.WOJTYRA,W.A.HOURY
JRNL TITL SOLUTION STRUCTURE OF THE DIMERIC ZINC BINDING DOMAIN OF THE
JRNL TITL 2 CHAPERONE CLPX.
JRNL REF J.BIOL.CHEM. V. 278 48991 2003
JRNL REFN ISSN 0021-9258
JRNL PMID 14525985
JRNL DOI 10.1074/JBC.M307826200
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : X-PLOR NIH
REMARK 3 AUTHORS : BRUNGER
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE IS BASED ON 463
REMARK 3 INTRAMOLECULAR DISTANCE RESTRAINTS, 47 INTERMOLECULAR RESTRAINTS
REMARK 3 AND 24 HYDROGEN BOND RESTRAINTS. 30 PHI/PSI DIHEDRAL ANGLE
REMARK 3 RESTRAINTS WERE INCORPORATED BASED ON ANALYSIS OF CHEMICAL SHIFTS
REMARK 3 BY TALOS
REMARK 4
REMARK 4 1OVX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAR-03.
REMARK 100 THE RCSB ID CODE IS RCSB018718.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 303
REMARK 210 PH : 7.5
REMARK 210 IONIC STRENGTH : 150 MM NACL
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 1.3 MM CLPX U-15N,13C
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C/15N-SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 500 MHZ
REMARK 210 SPECTROMETER MODEL : AVANCE; INOVA
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : X-PLOR NIH, NMRPIPE 2.1, NMRVIEW
REMARK 210 5.0
REMARK 210 METHOD USED : SIMULATED ANNEALING CARTESIAN
REMARK 210 DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 500
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH ACCEPTABLE
REMARK 210 COVALENT GEOMETRY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD TRIPLE-
REMARK 210 RESONANCE NMR METHODS
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465 RES C SSSEQI
REMARK 465 GLY A -6
REMARK 465 HIS A -5
REMARK 465 HIS A -4
REMARK 465 HIS A -3
REMARK 465 HIS A -2
REMARK 465 HIS A -1
REMARK 465 HIS A 0
REMARK 465 THR A 1
REMARK 465 ASP A 2
REMARK 465 LYS A 3
REMARK 465 ARG A 4
REMARK 465 LYS A 5
REMARK 465 ASP A 6
REMARK 465 GLY A 7
REMARK 465 SER A 8
REMARK 465 GLY A 9
REMARK 465 LYS A 10
REMARK 465 GLU A 49
REMARK 465 GLU A 50
REMARK 465 ILE A 51
REMARK 465 LYS A 52
REMARK 465 GLU A 53
REMARK 465 VAL A 54
REMARK 465 ALA A 55
REMARK 465 PRO A 56
REMARK 465 HIS A 57
REMARK 465 ARG A 58
REMARK 465 GLU A 59
REMARK 465 ARG A 60
REMARK 465 GLY B -6
REMARK 465 HIS B -5
REMARK 465 HIS B -4
REMARK 465 HIS B -3
REMARK 465 HIS B -2
REMARK 465 HIS B -1
REMARK 465 HIS B 0
REMARK 465 THR B 1
REMARK 465 ASP B 2
REMARK 465 LYS B 3
REMARK 465 ARG B 4
REMARK 465 LYS B 5
REMARK 465 ASP B 6
REMARK 465 GLY B 7
REMARK 465 SER B 8
REMARK 465 GLY B 9
REMARK 465 LYS B 10
REMARK 465 GLU B 49
REMARK 465 GLU B 50
REMARK 465 ILE B 51
REMARK 465 LYS B 52
REMARK 465 GLU B 53
REMARK 465 VAL B 54
REMARK 465 ALA B 55
REMARK 465 PRO B 56
REMARK 465 HIS B 57
REMARK 465 ARG B 58
REMARK 465 GLU B 59
REMARK 465 ARG B 60
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 HG SER A 20 H GLU A 23 1.23
REMARK 500 HG SER B 20 H GLU B 23 1.23
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 SER A 32 4.40 -160.89
REMARK 500 PHE B 16 -60.74 -93.72
REMARK 500 SER B 32 1.77 -161.42
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 ZN A 61 ZN
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 CYS A 14 SG
REMARK 620 2 CYS A 17 SG 109.5
REMARK 620 3 CYS A 36 SG 109.3 109.8
REMARK 620 4 CYS A 39 SG 108.9 108.7 110.7
REMARK 620 N 1 2 3
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 ZN B 61 ZN
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 CYS B 14 SG
REMARK 620 2 CYS B 17 SG 109.6
REMARK 620 3 CYS B 36 SG 109.4 109.8
REMARK 620 4 CYS B 39 SG 109.0 108.4 110.7
REMARK 620 N 1 2 3
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 61
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 61
DBREF 1OVX A 1 60 UNP P0A6H1 CLPX_ECOLI 1 60
DBREF 1OVX B 1 60 UNP P0A6H1 CLPX_ECOLI 1 60
SEQADV 1OVX GLY A -6 UNP P0A6H1 EXPRESSION TAG
SEQADV 1OVX HIS A -5 UNP P0A6H1 EXPRESSION TAG
SEQADV 1OVX HIS A -4 UNP P0A6H1 EXPRESSION TAG
SEQADV 1OVX HIS A -3 UNP P0A6H1 EXPRESSION TAG
SEQADV 1OVX HIS A -2 UNP P0A6H1 EXPRESSION TAG
SEQADV 1OVX HIS A -1 UNP P0A6H1 EXPRESSION TAG
SEQADV 1OVX HIS A 0 UNP P0A6H1 EXPRESSION TAG
SEQADV 1OVX GLY B -6 UNP P0A6H1 EXPRESSION TAG
SEQADV 1OVX HIS B -5 UNP P0A6H1 EXPRESSION TAG
SEQADV 1OVX HIS B -4 UNP P0A6H1 EXPRESSION TAG
SEQADV 1OVX HIS B -3 UNP P0A6H1 EXPRESSION TAG
SEQADV 1OVX HIS B -2 UNP P0A6H1 EXPRESSION TAG
SEQADV 1OVX HIS B -1 UNP P0A6H1 EXPRESSION TAG
SEQADV 1OVX HIS B 0 UNP P0A6H1 EXPRESSION TAG
SEQRES 1 A 67 GLY HIS HIS HIS HIS HIS HIS THR ASP LYS ARG LYS ASP
SEQRES 2 A 67 GLY SER GLY LYS LEU LEU TYR CYS SER PHE CYS GLY LYS
SEQRES 3 A 67 SER GLN HIS GLU VAL ARG LYS LEU ILE ALA GLY PRO SER
SEQRES 4 A 67 VAL TYR ILE CYS ASP GLU CYS VAL ASP LEU CYS ASN ASP
SEQRES 5 A 67 ILE ILE ARG GLU GLU ILE LYS GLU VAL ALA PRO HIS ARG
SEQRES 6 A 67 GLU ARG
SEQRES 1 B 67 GLY HIS HIS HIS HIS HIS HIS THR ASP LYS ARG LYS ASP
SEQRES 2 B 67 GLY SER GLY LYS LEU LEU TYR CYS SER PHE CYS GLY LYS
SEQRES 3 B 67 SER GLN HIS GLU VAL ARG LYS LEU ILE ALA GLY PRO SER
SEQRES 4 B 67 VAL TYR ILE CYS ASP GLU CYS VAL ASP LEU CYS ASN ASP
SEQRES 5 B 67 ILE ILE ARG GLU GLU ILE LYS GLU VAL ALA PRO HIS ARG
SEQRES 6 B 67 GLU ARG
HET ZN A 61 1
HET ZN B 61 1
HETNAM ZN ZINC ION
FORMUL 3 ZN 2(ZN 2+)
HELIX 1 1 ASP A 37 ARG A 48 1 12
HELIX 2 2 ASP B 37 ARG B 48 1 12
SHEET 1 A 2 LEU A 27 ALA A 29 0
SHEET 2 A 2 TYR A 34 CYS A 36 -1 O ILE A 35 N ILE A 28
SHEET 1 B 2 LEU B 27 ALA B 29 0
SHEET 2 B 2 TYR B 34 CYS B 36 -1 O ILE B 35 N ILE B 28
LINK SG CYS A 14 ZN ZN A 61 1555 1555 2.30
LINK SG CYS A 17 ZN ZN A 61 1555 1555 2.32
LINK SG CYS A 36 ZN ZN A 61 1555 1555 2.29
LINK SG CYS A 39 ZN ZN A 61 1555 1555 2.27
LINK SG CYS B 14 ZN ZN B 61 1555 1555 2.30
LINK SG CYS B 17 ZN ZN B 61 1555 1555 2.32
LINK SG CYS B 36 ZN ZN B 61 1555 1555 2.29
LINK SG CYS B 39 ZN ZN B 61 1555 1555 2.27
SITE 1 AC1 4 CYS A 14 CYS A 17 CYS A 36 CYS A 39
SITE 1 AC2 4 CYS B 14 CYS B 17 CYS B 36 CYS B 39
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
Complete list - 25 20 Bytes