Header list of 1ov2.pdb file
Complete list - b 23 2 Bytes
HEADER RECEPTOR ASSOCIATED PROTEIN 25-MAR-03 1OV2
TITLE ENSEMBLE OF THE SOLUTION STRUCTURES OF DOMAIN ONE OF RECEPTOR
TITLE 2 ASSOCIATED PROTEIN
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: ALPHA-2-MACROGLOBULIN RECEPTOR-ASSOCIATED PROTEIN
COMPND 3 PRECURSOR;
COMPND 4 CHAIN: A;
COMPND 5 FRAGMENT: DOMAIN 1 OF RECEPTOR ASSOCIATED PROTEIN;
COMPND 6 SYNONYM: ALPHA-2-MRAP, LOW DENSITY LIPOPROTEIN RECEPTOR-RELATED
COMPND 7 PROTEIN- ASSOCIATED PROTEIN 1, RAP;
COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: LRPAP1 OR A2MRAP;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PGEX-2T
KEYWDS HELICAL PROTEIN, RECEPTOR ASSOCIATED PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 39
AUTHOR Y.WU,M.MIGLIORINI,P.YU,D.K.STRICKLAND,Y.X.WANG
REVDAT 4 23-FEB-22 1OV2 1 REMARK
REVDAT 3 24-FEB-09 1OV2 1 VERSN
REVDAT 2 22-FEB-05 1OV2 1 JRNL
REVDAT 1 06-APR-04 1OV2 0
JRNL AUTH Y.WU,M.MIGLIORINI,P.YU,D.K.STRICKLAND,Y.X.WANG
JRNL TITL 1H, 13C AND 15N RESONANCE ASSIGNMENTS OF DOMAIN 1 OF
JRNL TITL 2 RECEPTOR ASSOCIATED PROTEIN.
JRNL REF J.BIOMOL.NMR V. 26 187 2003
JRNL REFN ISSN 0925-2738
JRNL PMID 12766414
JRNL DOI 10.1023/A:1023534107920
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : XPLOR-NIH 1, INTERHLX 1
REMARK 3 AUTHORS : SCHWIETERS, C. (XPLOR-NIH), K. YAP, UNIVERSITY OF
REMARK 3 TORONTO, CANANDA (INTERHLX)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES WERE DETERMINED USING
REMARK 3 MULTI-DIMENSION HETERO-NUCLEAR NMR SPECTROSCOPY. THE CONSTRAINTS
REMARK 3 CONSIST OF NOE, DIHEADRAL, J-COUPLING, CHEMICAL SHIFT,
REMARK 3 CONFORMATIONAL DATA BASE AS WELL AS TWO SETSOF DIPOLAR COUPLINGS
REMARK 3 MEASURED FROM TWO DIFFERENT ALIGNMENT MEDIA.
REMARK 4
REMARK 4 1OV2 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAR-03.
REMARK 100 THE DEPOSITION ID IS D_1000018693.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 303.5
REMARK 210 PH : 6.5
REMARK 210 IONIC STRENGTH : 50 MM NACL, 75 MM NAPI
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : ~1.2 MM OF 13C/15N ISOTOPE
REMARK 210 LABELED DOMAIN 1 OF RECEPTOR
REMARK 210 ASSOCIATED PROTEIN
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C
REMARK 210 -SEPARATED_NOESY; HNHA; 4D_13C/
REMARK 210 15N-SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 800 MHZ
REMARK 210 SPECTROMETER MODEL : INOVA
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRPIPE 1, INTERHLX 1
REMARK 210 METHOD USED : TORSIONA ANGLE DYNAMICS AND
REMARK 210 SIMULATED ANEALING
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 60
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 39
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST
REMARK 210 RESTRAINT VIOLATIONS
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465 MODELS 1-39
REMARK 465 RES C SSSEQI
REMARK 465 TYR A 1
REMARK 465 SER A 2
REMARK 465 ARG A 3
REMARK 465 GLU A 4
REMARK 465 LYS A 5
REMARK 465 ASN A 6
REMARK 465 GLN A 7
REMARK 465 PRO A 8
REMARK 465 LYS A 9
REMARK 465 PRO A 10
REMARK 465 SER A 11
REMARK 465 PRO A 12
REMARK 465 LYS A 13
REMARK 465 ARG A 14
REMARK 465 GLU A 15
REMARK 465 SER A 16
REMARK 465 VAL A 99
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 3 GLN A 98 C O
REMARK 470 4 GLN A 98 O
REMARK 470 37 GLN A 98 O
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 OD2 ASP A 68 H LYS A 73 1.42
REMARK 500 O GLU A 74 H ILE A 78 1.59
REMARK 500 O TRP A 59 H LEU A 62 1.60
REMARK 500 O GLU A 72 N ALA A 75 2.13
REMARK 500 O GLU A 18 O PHE A 20 2.14
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 GLU A 19 -59.78 -11.17
REMARK 500 1 PHE A 20 -166.18 -114.85
REMARK 500 1 HIS A 36 62.64 61.06
REMARK 500 1 PRO A 38 156.53 -46.51
REMARK 500 1 ASP A 91 -112.95 -83.06
REMARK 500 1 LYS A 93 -30.48 -178.70
REMARK 500 1 ASP A 95 -145.23 -95.68
REMARK 500 1 ALA A 96 -100.07 27.61
REMARK 500 1 ARG A 97 155.14 -45.45
REMARK 500 2 GLU A 19 -58.30 -10.78
REMARK 500 2 PHE A 20 -165.38 -115.44
REMARK 500 2 HIS A 36 61.47 60.84
REMARK 500 2 PRO A 38 156.96 -46.30
REMARK 500 2 ASP A 91 60.24 28.55
REMARK 500 2 LYS A 93 -149.14 -71.33
REMARK 500 2 LYS A 94 -127.82 -154.90
REMARK 500 2 ASP A 95 -127.71 -137.49
REMARK 500 2 ALA A 96 -66.34 94.06
REMARK 500 2 ARG A 97 45.00 -98.15
REMARK 500 3 GLU A 18 -164.67 -116.92
REMARK 500 3 PHE A 20 -168.82 -120.22
REMARK 500 3 HIS A 36 61.53 61.22
REMARK 500 3 PRO A 38 157.84 -46.46
REMARK 500 3 ASP A 91 13.78 -53.94
REMARK 500 3 LYS A 93 131.28 -1.72
REMARK 500 3 LYS A 94 -58.04 163.51
REMARK 500 3 ASP A 95 -137.61 -74.81
REMARK 500 4 GLU A 18 148.66 53.98
REMARK 500 4 GLU A 19 -50.07 -11.96
REMARK 500 4 PHE A 20 -167.00 -110.39
REMARK 500 4 HIS A 36 99.75 42.01
REMARK 500 4 ASP A 91 11.32 -60.34
REMARK 500 4 LYS A 93 -114.74 -175.00
REMARK 500 4 LYS A 94 -165.81 94.06
REMARK 500 4 ALA A 96 51.90 -63.24
REMARK 500 4 ARG A 97 -74.99 -113.26
REMARK 500 5 GLU A 19 -60.74 -13.06
REMARK 500 5 PHE A 20 -165.34 -115.97
REMARK 500 5 HIS A 36 63.33 62.06
REMARK 500 5 PRO A 38 155.39 -46.86
REMARK 500 5 ASP A 91 -0.27 -50.98
REMARK 500 5 LYS A 93 -62.50 -140.66
REMARK 500 5 ARG A 97 -72.66 -174.51
REMARK 500 6 GLU A 18 152.70 154.95
REMARK 500 6 HIS A 36 97.39 45.32
REMARK 500 6 ASP A 91 -1.49 -52.66
REMARK 500 6 LYS A 94 62.19 2.23
REMARK 500 6 ASP A 95 157.68 -31.33
REMARK 500 6 ALA A 96 121.21 -38.13
REMARK 500 6 ARG A 97 -65.71 -102.58
REMARK 500
REMARK 500 THIS ENTRY HAS 289 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1OP1 RELATED DB: PDB
REMARK 900 MINIMIZED AVERAGE STRUCTURE OF THE ENSEMBLE OF 39 STRUCTURES
DBREF 1OV2 A 1 99 UNP P30533 AMRP_HUMAN 35 133
SEQRES 1 A 99 TYR SER ARG GLU LYS ASN GLN PRO LYS PRO SER PRO LYS
SEQRES 2 A 99 ARG GLU SER GLY GLU GLU PHE ARG MET GLU LYS LEU ASN
SEQRES 3 A 99 GLN LEU TRP GLU LYS ALA GLN ARG LEU HIS LEU PRO PRO
SEQRES 4 A 99 VAL ARG LEU ALA GLU LEU HIS ALA ASP LEU LYS ILE GLN
SEQRES 5 A 99 GLU ARG ASP GLU LEU ALA TRP LYS LYS LEU LYS LEU ASP
SEQRES 6 A 99 GLY LEU ASP GLU ASP GLY GLU LYS GLU ALA ARG LEU ILE
SEQRES 7 A 99 ARG ASN LEU ASN VAL ILE LEU ALA LYS TYR GLY LEU ASP
SEQRES 8 A 99 GLY LYS LYS ASP ALA ARG GLN VAL
HELIX 1 1 MET A 22 HIS A 36 1 15
HELIX 2 2 PRO A 38 GLY A 66 1 29
HELIX 3 3 GLY A 71 GLY A 89 1 19
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - b 23 2 Bytes