Header list of 1ojg.pdb file
Complete list - n 17 2 Bytes
HEADER TRANSFERASE 10-JUL-03 1OJG
TITLE SENSORY DOMAIN OF THE MEMBRANEOUS TWO-COMPONENT FUMARATE SENSOR DCUS
TITLE 2 OF E. COLI
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: SENSOR PROTEIN DCUS;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: FUMARATE SENSORY DOMAIN, RESIDUES 45-180;
COMPND 5 SYNONYM: DCUS;
COMPND 6 EC: 2.7.3.-;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;
SOURCE 3 ORGANISM_TAXID: 469008;
SOURCE 4 STRAIN: BL21(DE3);
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);
SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PMW145
KEYWDS TRANSFERASE, FUMARATE, DCUS, HISTIDINE KINASE
EXPDTA SOLUTION NMR
NUMMDL 10
AUTHOR L.PAPPALARDO,I.G.JANAUSCH,V.VIJAYAN,E.ZIENTZ,J.JUNKER,W.PETI,
AUTHOR 2 M.ZWECKSTETTER,G.UNDEN,C.GRIESINGER
REVDAT 4 17-JAN-18 1OJG 1 TITLE SOURCE JRNL
REVDAT 3 24-FEB-09 1OJG 1 VERSN
REVDAT 2 02-OCT-03 1OJG 1 JRNL
REVDAT 1 15-AUG-03 1OJG 0
JRNL AUTH L.PAPPALARDO,I.G.JANAUSCH,V.VIJAYAN,E.ZIENTZ,J.JUNKER,
JRNL AUTH 2 W.PETI,M.ZWECKSTETTER,G.UNDEN,C.GRIESINGER
JRNL TITL THE NMR STRUCTURE OF THE SENSORY DOMAIN OF THE MEMBRANOUS
JRNL TITL 2 TWO-COMPONENT FUMARATE SENSOR (HISTIDINE PROTEIN KINASE)
JRNL TITL 3 DCUS OF ESCHERICHIA COLI.
JRNL REF J. BIOL. CHEM. V. 278 39185 2003
JRNL REFN ISSN 0021-9258
JRNL PMID 12907689
JRNL DOI 10.1074/JBC.C300344200
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : X-PLOR-NIH
REMARK 3 AUTHORS : BRUNGER, CLORE, TJ
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1OJG COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-JUL-03.
REMARK 100 THE DEPOSITION ID IS D_1290012986.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 303
REMARK 210 PH : 6.5
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : 1 ATM
REMARK 210 SAMPLE CONTENTS : NULL
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 15N-HSQC; NOESY-HSQC; TOCSY
REMARK 210 -HSQC; HSQC-NOESY-HSQC; HNCO;
REMARK 210 CBCA(CO)NH; HNCACB; CC(CO)NH;
REMARK 210 HBHACONH; HCCH-COSY; HCCH-
REMARK 210 ADIABATIC TOCSY
REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 700 MHZ; 800 MHZ
REMARK 210 SPECTROMETER MODEL : DRX
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : XWINNMR, XEASY, X-PLOR
REMARK 210 METHOD USED : RESTRAINED MOLECULAR DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 200
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10
REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST TOTAL ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (RES=RESIDUE NAME;
REMARK 470 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 470 MODELS 1-10
REMARK 470 RES CSSEQI ATOMS
REMARK 470 ARG A 180 O
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O ALA A 84 H GLU A 87 1.15
REMARK 500 O ILE A 85 H ALA A 88 1.19
REMARK 500 O ILE A 69 H GLY A 72 1.32
REMARK 500 HD1 HIS A 110 H GLU A 112 1.33
REMARK 500 O GLY A 72 H LYS A 75 1.38
REMARK 500 O ALA A 128 H GLY A 131 1.46
REMARK 500 O ALA A 84 N GLU A 87 2.04
REMARK 500 O ILE A 85 N ALA A 88 2.07
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 5 VAL A 100 N - CA - C ANGL. DEV. = -16.8 DEGREES
REMARK 500 10 TYR A 153 CB - CG - CD1 ANGL. DEV. = -3.9 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 SER A 66 -152.83 -66.38
REMARK 500 1 ILE A 69 -78.46 -56.44
REMARK 500 1 LYS A 75 -158.15 -122.73
REMARK 500 1 PRO A 77 -73.53 -38.59
REMARK 500 1 SER A 80 -154.78 -66.97
REMARK 500 1 ARG A 92 -81.67 -57.80
REMARK 500 1 ASN A 93 27.40 -148.33
REMARK 500 1 ASP A 94 -1.34 70.74
REMARK 500 1 LEU A 96 170.69 152.91
REMARK 500 1 ASP A 102 -168.07 -74.18
REMARK 500 1 GLN A 104 107.93 -170.89
REMARK 500 1 LEU A 106 142.27 153.50
REMARK 500 1 HIS A 110 140.12 169.86
REMARK 500 1 ILE A 116 -82.79 -51.69
REMARK 500 1 GLN A 118 -70.50 -80.79
REMARK 500 1 PRO A 119 117.60 -29.91
REMARK 500 1 PHE A 120 149.86 -175.37
REMARK 500 1 LYS A 121 11.32 48.95
REMARK 500 1 ASP A 123 -11.88 62.71
REMARK 500 1 LEU A 126 -32.62 -38.50
REMARK 500 1 GLU A 132 140.47 167.75
REMARK 500 1 LEU A 142 -11.17 62.70
REMARK 500 1 ASP A 154 -2.41 -58.87
REMARK 500 1 GLU A 155 21.52 98.25
REMARK 500 1 ASN A 156 19.13 -140.78
REMARK 500 1 LEU A 169 152.18 73.66
REMARK 500 1 SER A 170 -104.81 151.30
REMARK 500 1 ARG A 171 79.34 -53.04
REMARK 500 1 VAL A 172 -25.83 -175.12
REMARK 500 2 SER A 66 -161.10 -76.61
REMARK 500 2 ILE A 69 -73.39 -58.71
REMARK 500 2 LYS A 75 -150.58 -134.97
REMARK 500 2 PRO A 77 -16.10 -29.00
REMARK 500 2 SER A 80 -156.75 -68.57
REMARK 500 2 ILE A 82 -7.97 -49.55
REMARK 500 2 ARG A 92 -93.63 -76.33
REMARK 500 2 ASN A 93 31.12 -144.44
REMARK 500 2 LEU A 96 176.77 164.62
REMARK 500 2 MET A 103 72.35 -66.89
REMARK 500 2 GLN A 104 -52.24 -140.70
REMARK 500 2 SER A 105 137.29 97.38
REMARK 500 2 LEU A 106 95.80 157.44
REMARK 500 2 ARG A 107 94.01 -39.43
REMARK 500 2 HIS A 110 149.68 -174.44
REMARK 500 2 ILE A 116 -88.05 -56.00
REMARK 500 2 GLN A 118 -72.42 -69.64
REMARK 500 2 PRO A 119 120.07 -24.95
REMARK 500 2 PHE A 120 138.12 -178.11
REMARK 500 2 LYS A 121 4.98 50.47
REMARK 500 2 ASP A 123 -17.98 71.04
REMARK 500
REMARK 500 THIS ENTRY HAS 321 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 650
REMARK 650 HELIX
REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED.
DBREF 1OJG A 45 180 UNP P39272 DCUS_ECOLI 45 180
SEQRES 1 A 136 SER ASP MET THR ARG ASP GLY LEU ALA ASN LYS ALA LEU
SEQRES 2 A 136 ALA VAL ALA ARG THR LEU ALA ASP SER PRO GLU ILE ARG
SEQRES 3 A 136 GLN GLY LEU GLN LYS LYS PRO GLN GLU SER GLY ILE GLN
SEQRES 4 A 136 ALA ILE ALA GLU ALA VAL ARG LYS ARG ASN ASP LEU LEU
SEQRES 5 A 136 PHE ILE VAL VAL THR ASP MET GLN SER LEU ARG TYR SER
SEQRES 6 A 136 HIS PRO GLU ALA GLN ARG ILE GLY GLN PRO PHE LYS GLY
SEQRES 7 A 136 ASP ASP ILE LEU LYS ALA LEU ASN GLY GLU GLU ASN VAL
SEQRES 8 A 136 ALA ILE ASN ARG GLY PHE LEU ALA GLN ALA LEU ARG VAL
SEQRES 9 A 136 PHE THR PRO ILE TYR ASP GLU ASN HIS LYS GLN ILE GLY
SEQRES 10 A 136 VAL VAL ALA ILE GLY LEU GLU LEU SER ARG VAL THR GLN
SEQRES 11 A 136 GLN ILE ASN ASP SER ARG
HELIX 1 1 SER A 45 ALA A 64 1 20
HELIX 2 2 PRO A 67 GLN A 74 1 8
HELIX 3 3 LYS A 76 SER A 80 5 5
HELIX 4 4 ALA A 84 ASP A 94 1 11
HELIX 5 5 ALA A 113 GLY A 117 5 5
HELIX 6 6 ASP A 124 LEU A 129 1 6
HELIX 7 7 VAL A 172 SER A 179 1 8
SHEET 1 AA 4 PHE A 97 THR A 101 0
SHEET 2 AA 4 GLN A 159 LEU A 167 -1 O VAL A 162 N THR A 101
SHEET 3 AA 4 ALA A 145 TYR A 153 -1 O LEU A 146 N LEU A 167
SHEET 4 AA 4 ASN A 134 ASN A 138 -1 O ASN A 134 N PHE A 149
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - n 17 2 Bytes