Header list of 1ocp.pdb file
Complete list - b 23 2 Bytes
HEADER DNA BINDING PROTEIN 21-FEB-95 1OCP
TITLE SOLUTION STRUCTURE OF OCT3 POU-HOMEODOMAIN
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: OCT-3;
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS;
SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE;
SOURCE 4 ORGANISM_TAXID: 10090;
SOURCE 5 GENE: T7 GENE 1 UNDER CONTROL OF THE;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: LAC;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PAR2113;
SOURCE 11 EXPRESSION_SYSTEM_GENE: T7 GENE 1 UNDER CONTROL OF THE LAC UV5
SOURCE 12 PROMOTER
KEYWDS DNA-BINDING PROTEIN, DNA BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR E.H.MORITA,F.HAYASHI,M.SHIRAKAWA,Y.KYOGOKU
REVDAT 3 23-FEB-22 1OCP 1 KEYWDS REMARK
REVDAT 2 24-FEB-09 1OCP 1 VERSN
REVDAT 1 15-SEP-95 1OCP 0
JRNL AUTH E.H.MORITA,M.SHIRAKAWA,F.HAYASHI,M.IMAGAWA,Y.KYOGOKU
JRNL TITL STRUCTURE OF THE OCT-3 POU-HOMEODOMAIN IN SOLUTION, AS
JRNL TITL 2 DETERMINED BY TRIPLE RESONANCE HETERONUCLEAR
JRNL TITL 3 MULTIDIMENSIONAL NMR SPECTROSCOPY
JRNL REF PROTEIN SCI. V. 4 729 1995
JRNL REFN ISSN 0961-8368
JRNL PMID 7613470
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH E.H.MORITA,M.SHIRAKAWA,F.HAYASHI,K.IMAGAWA,Y.KYOGOKU
REMARK 1 TITL SECONDARY STRUCTURE OF THE OCT-3 POU HOMEODOMAIN AS
REMARK 1 TITL 2 DETERMINED BY 1H-15N NMR SPECTROSCOPY
REMARK 1 REF FEBS LETT. V. 321 107 1993
REMARK 1 REFN ISSN 0014-5793
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : X-PLOR 3.1
REMARK 3 AUTHORS : BRUNGER
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1OCP COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 100 THE DEPOSITION ID IS D_1000175431.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : NULL
REMARK 210 PH : NULL
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : NULL
REMARK 210 SAMPLE CONTENTS : NULL
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL
REMARK 210 SPECTROMETER FIELD STRENGTH : NULL
REMARK 210 SPECTROMETER MODEL : NULL
REMARK 210 SPECTROMETER MANUFACTURER : NULL
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NULL
REMARK 210 METHOD USED : NULL
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 GLU A 2 50.57 -99.28
REMARK 500 1 VAL A 5 26.73 -149.44
REMARK 500 1 GLN A 6 52.32 -146.21
REMARK 500 1 ARG A 10 -70.07 -156.81
REMARK 500 1 SER A 14 31.57 -153.95
REMARK 500 1 ILE A 15 71.45 -151.04
REMARK 500 1 GLN A 61 58.51 -115.83
REMARK 500 2 THR A 3 34.79 -99.42
REMARK 500 2 LEU A 4 37.65 -143.62
REMARK 500 2 GLN A 6 79.52 -109.14
REMARK 500 2 ALA A 7 -166.88 -63.78
REMARK 500 2 LYS A 9 26.46 -155.82
REMARK 500 2 LYS A 11 -164.79 -160.25
REMARK 500 2 ARG A 12 39.66 -99.05
REMARK 500 2 GLN A 61 63.20 -109.96
REMARK 500 2 LYS A 64 -47.47 -150.11
REMARK 500 3 GLU A 2 -44.04 -139.81
REMARK 500 3 GLN A 6 26.15 -149.30
REMARK 500 3 ARG A 10 60.63 -102.70
REMARK 500 3 PRO A 31 32.88 -87.35
REMARK 500 3 LYS A 64 32.72 -96.64
REMARK 500 3 ARG A 65 -45.57 -135.57
REMARK 500 4 THR A 3 -71.68 -97.75
REMARK 500 4 VAL A 5 49.57 -142.64
REMARK 500 4 LYS A 9 38.93 -149.59
REMARK 500 4 ARG A 10 77.96 -155.85
REMARK 500 4 GLN A 61 58.94 -117.71
REMARK 500 4 ARG A 65 29.98 -159.87
REMARK 500 4 SER A 66 -75.95 -156.80
REMARK 500 5 GLU A 2 31.00 -142.25
REMARK 500 5 ALA A 7 -176.16 -66.81
REMARK 500 5 ARG A 8 35.02 -160.61
REMARK 500 5 LYS A 9 42.36 -155.52
REMARK 500 5 LYS A 11 41.45 -90.93
REMARK 500 5 ARG A 12 13.71 -142.40
REMARK 500 5 SER A 14 32.12 -146.85
REMARK 500 5 LYS A 64 -62.90 -92.95
REMARK 500 5 SER A 66 71.43 -158.15
REMARK 500 6 GLU A 2 62.83 -100.10
REMARK 500 6 VAL A 5 -46.02 -134.76
REMARK 500 6 ALA A 7 -175.84 -65.80
REMARK 500 6 LYS A 9 -63.48 -160.11
REMARK 500 6 ARG A 10 -58.23 -160.74
REMARK 500 6 ARG A 12 39.63 -160.28
REMARK 500 6 SER A 14 28.70 -158.74
REMARK 500 6 ILE A 15 79.24 -154.59
REMARK 500 6 GLN A 61 57.42 -117.32
REMARK 500 7 ARG A 8 29.31 -160.36
REMARK 500 7 ARG A 10 39.46 -99.26
REMARK 500 7 GLN A 61 51.48 -95.88
REMARK 500
REMARK 500 THIS ENTRY HAS 139 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 1 ARG A 8 0.25 SIDE CHAIN
REMARK 500 1 ARG A 10 0.31 SIDE CHAIN
REMARK 500 1 ARG A 12 0.28 SIDE CHAIN
REMARK 500 1 ARG A 18 0.23 SIDE CHAIN
REMARK 500 1 ARG A 20 0.26 SIDE CHAIN
REMARK 500 1 ARG A 53 0.31 SIDE CHAIN
REMARK 500 1 ARG A 59 0.20 SIDE CHAIN
REMARK 500 1 ARG A 60 0.27 SIDE CHAIN
REMARK 500 1 ARG A 65 0.24 SIDE CHAIN
REMARK 500 2 ARG A 8 0.24 SIDE CHAIN
REMARK 500 2 ARG A 10 0.23 SIDE CHAIN
REMARK 500 2 ARG A 12 0.30 SIDE CHAIN
REMARK 500 2 ARG A 18 0.32 SIDE CHAIN
REMARK 500 2 ARG A 20 0.31 SIDE CHAIN
REMARK 500 2 ARG A 53 0.27 SIDE CHAIN
REMARK 500 2 ARG A 59 0.22 SIDE CHAIN
REMARK 500 2 ARG A 60 0.30 SIDE CHAIN
REMARK 500 2 ARG A 65 0.30 SIDE CHAIN
REMARK 500 3 ARG A 8 0.20 SIDE CHAIN
REMARK 500 3 ARG A 10 0.31 SIDE CHAIN
REMARK 500 3 ARG A 12 0.19 SIDE CHAIN
REMARK 500 3 ARG A 18 0.21 SIDE CHAIN
REMARK 500 3 ARG A 20 0.30 SIDE CHAIN
REMARK 500 3 ARG A 53 0.27 SIDE CHAIN
REMARK 500 3 ARG A 59 0.19 SIDE CHAIN
REMARK 500 3 ARG A 60 0.27 SIDE CHAIN
REMARK 500 3 ARG A 65 0.25 SIDE CHAIN
REMARK 500 4 ARG A 8 0.29 SIDE CHAIN
REMARK 500 4 ARG A 10 0.30 SIDE CHAIN
REMARK 500 4 ARG A 12 0.32 SIDE CHAIN
REMARK 500 4 ARG A 18 0.32 SIDE CHAIN
REMARK 500 4 ARG A 20 0.27 SIDE CHAIN
REMARK 500 4 ARG A 53 0.23 SIDE CHAIN
REMARK 500 4 ARG A 59 0.31 SIDE CHAIN
REMARK 500 4 ARG A 60 0.22 SIDE CHAIN
REMARK 500 4 ARG A 65 0.31 SIDE CHAIN
REMARK 500 5 ARG A 8 0.28 SIDE CHAIN
REMARK 500 5 ARG A 10 0.20 SIDE CHAIN
REMARK 500 5 ARG A 12 0.24 SIDE CHAIN
REMARK 500 5 ARG A 18 0.24 SIDE CHAIN
REMARK 500 5 ARG A 20 0.25 SIDE CHAIN
REMARK 500 5 ARG A 53 0.32 SIDE CHAIN
REMARK 500 5 ARG A 59 0.30 SIDE CHAIN
REMARK 500 5 ARG A 60 0.31 SIDE CHAIN
REMARK 500 5 ARG A 65 0.27 SIDE CHAIN
REMARK 500 6 ARG A 8 0.21 SIDE CHAIN
REMARK 500 6 ARG A 10 0.25 SIDE CHAIN
REMARK 500 6 ARG A 12 0.30 SIDE CHAIN
REMARK 500 6 ARG A 18 0.30 SIDE CHAIN
REMARK 500 6 ARG A 20 0.30 SIDE CHAIN
REMARK 500
REMARK 500 THIS ENTRY HAS 180 PLANE DEVIATIONS.
REMARK 500
REMARK 500 REMARK: NULL
DBREF 1OCP A 2 67 UNP P20263 PO5F1_MOUSE 217 282
SEQRES 1 A 67 MET GLU THR LEU VAL GLN ALA ARG LYS ARG LYS ARG THR
SEQRES 2 A 67 SER ILE GLU ASN ARG VAL ARG TRP SER LEU GLU THR MET
SEQRES 3 A 67 PHE LEU LYS CYS PRO LYS PRO SER LEU GLN GLN ILE THR
SEQRES 4 A 67 HIS ILE ALA ASN GLN LEU GLY LEU GLU LYS ASP VAL VAL
SEQRES 5 A 67 ARG VAL TRP PHE CYS ASN ARG ARG GLN LYS GLY LYS ARG
SEQRES 6 A 67 SER SER
HELIX 1 1 ASN A 17 PHE A 27 1 11
HELIX 2 2 LEU A 35 LEU A 45 1 11
HELIX 3 3 LYS A 49 ARG A 60 1 12
SHEET 1 B 2 ALA A 42 LEU A 45 0
SHEET 2 B 2 GLU A 16 VAL A 19 -1 N ARG A 18 O ASN A 43
SHEET 1 D 2 LYS A 32 SER A 34 0
SHEET 2 D 2 LYS A 64 SER A 66 -1 N ARG A 65 O PRO A 33
SHEET 1 E 2 PRO A 31 PRO A 33 0
SHEET 2 E 2 LYS A 9 LYS A 11 1 N LYS A 9 O LYS A 32
SHEET 1 F 2 THR A 25 PHE A 27 0
SHEET 2 F 2 THR A 39 ILE A 41 -1 N ILE A 41 O THR A 25
SHEET 1 G 2 VAL A 19 TRP A 21 0
SHEET 2 G 2 HIS A 40 ASN A 43 1 N ILE A 41 O VAL A 19
SHEET 1 H 2 VAL A 52 TRP A 55 0
SHEET 2 H 2 VAL A 54 PHE A 56 -1 N TRP A 55 O ARG A 53
SHEET 1 I 2 VAL A 54 CYS A 57 0
SHEET 2 I 2 VAL A 51 ARG A 53 1 N VAL A 51 O TRP A 55
SHEET 1 J 2 ALA A 42 LEU A 45 0
SHEET 2 J 2 SER A 14 GLU A 16 -1 N GLU A 16 O ALA A 42
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - b 23 2 Bytes