Header list of 1o53.pdb file
Complete list - 23 20 Bytes
HEADER TRANSFERASE 11-AUG-03 1O53
TITLE SOLUTION STRUCTURE OF THE N-TERMINAL MEMBRANE ANCHOR OF E. COLI ENZYME
TITLE 2 IIA(GLUCOSE)
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: PTS SYSTEM, GLUCOSE-SPECIFIC IIA COMPONENT;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: N-TERMINAL MEMBRANE ANCHOR, RESIDUES 1-15 OF ENZYME
COMPND 5 IIA(GLUCOSE);
COMPND 6 SYNONYM: EIIA-GLC, GLUCOSE-PERMEASE IIA COMPONENT, PHOSPHOTRANSFERASE
COMPND 7 ENZYME II, A COMPONENT, EIII-GLC;
COMPND 8 EC: 2.7.1.69;
COMPND 9 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES;
SOURCE 3 OTHER_DETAILS: THE PEPTIDE WAS SYNTHESIZED USING THE SOLID-PHASE
SOURCE 4 METHOD AND PURIFIED BY HPLC. THE SEQUENCE OF THE PEPTIDE IS
SOURCE 5 NATURALLY FOUND IN ESCHERICHIA COLI (BACTERIA).
KEYWDS AMPHIPATHIC HELIX, TRANSFERASE
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR G.WANG,P.A.KEIFER,A.PETERKOFSKY
REVDAT 3 23-FEB-22 1O53 1 REMARK
REVDAT 2 24-FEB-09 1O53 1 VERSN
REVDAT 1 19-AUG-03 1O53 0
SPRSDE 19-AUG-03 1O53 1O0Z
JRNL AUTH G.WANG,P.A.KEIFER,A.PETERKOFSKY
JRNL TITL SOLUTION STRUCTURE OF THE N-TERMINAL AMPHITROPIC DOMAIN OF
JRNL TITL 2 ESCHERICHIA COLI GLUCOSE-SPECIFIC ENZYME IIA IN
JRNL TITL 3 MEMBRANE-MIMETIC MICELLES
JRNL REF PROTEIN SCI. V. 12 1087 2003
JRNL REFN ISSN 0961-8368
JRNL PMID 12717030
JRNL DOI 10.1110/PS.0301503
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : NMRPIPE/NMRDRAW 2.1
REMARK 3 AUTHORS : DELAGLIO, F.
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS:
REMARK 3 THE STRUCTURES ARE BASED ON 146 DISTANCES DERIVED FROM THE NOESY
REMARK 3 SPECTRA.
REMARK 3 NO DIHEDRAL ANGLES OR HYDROGEN-BOND RESTRAINTS WERE APPLIED.
REMARK 4
REMARK 4 1O53 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-AUG-03.
REMARK 100 THE DEPOSITION ID IS D_1000001813.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 5.4
REMARK 210 IONIC STRENGTH : NO BUFFER
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : NATURAL ABUNDANCE SYNTHETIC
REMARK 210 PEPTIDE 5 MM PEPTIDE AND 50 MM
REMARK 210 DIHEXANOYL PHOSPHATIDYLGLYCEROL
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, TOCSY, DQF-COSY
REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ
REMARK 210 SPECTROMETER MODEL : INOVA
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : PIPP 1.0, XPLOR-NIH 1.06, MOLMOL
REMARK 210 2K.1
REMARK 210 METHOD USED : SIMULATED ANNEALING
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : NO NOE VIOLATIONS GREATER THAN
REMARK 210 0.20 A; RMS DIFFERENCE FOR BOND
REMARK 210 DEVIATIONS FROM IDEALITY LESS
REMARK 210 THAN 0.01 A; RMS DIFFERENCE FOR
REMARK 210 ANGLE DEVIATIONS FROM IDEALITY
REMARK 210 LESS THAN 2 DEGREES; STRUCTURES
REMARK 210 WITH THE LOWEREST ENERGIES IN
REMARK 210 THE ENSEMBLE; STRUCTURES MOST
REMARK 210 RESEMBLE THE AVERAGE STRUCTURE.
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD 2D
REMARK 210 HOMONUCLEAR NMR TECHNIQUES.
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 H2 GLY A 1 H LEU A 2 1.32
REMARK 500 O PHE A 3 H LYS A 7 1.45
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 LEU A 2 -86.51 -154.99
REMARK 500 1 ASP A 12 -92.65 -174.25
REMARK 500 1 ASP A 13 -2.01 60.39
REMARK 500 1 LYS A 14 101.33 -172.69
REMARK 500 2 LEU A 2 -96.87 -75.73
REMARK 500 2 ASP A 13 34.91 -78.29
REMARK 500 2 LYS A 14 -107.30 37.20
REMARK 500 3 LEU A 2 -78.94 -159.80
REMARK 500 3 ASP A 12 71.31 -153.72
REMARK 500 3 LYS A 14 90.52 31.01
REMARK 500 4 LEU A 2 -97.68 -137.99
REMARK 500 4 PHE A 3 -47.01 -21.46
REMARK 500 4 ASP A 4 -36.85 -39.85
REMARK 500 4 ASP A 12 -92.12 -97.35
REMARK 500 4 LYS A 14 148.33 58.59
REMARK 500 5 LEU A 2 -98.11 -137.31
REMARK 500 5 PHE A 3 -47.43 -20.67
REMARK 500 5 SER A 11 31.27 -89.94
REMARK 500 5 ASP A 13 -103.91 -95.39
REMARK 500 6 LEU A 2 -88.32 -88.86
REMARK 500 6 SER A 11 48.61 -89.37
REMARK 500 6 ASP A 12 20.92 -172.27
REMARK 500 7 LEU A 2 -87.81 -164.12
REMARK 500 7 SER A 11 3.97 -66.17
REMARK 500 7 ASP A 13 46.09 -78.97
REMARK 500 8 LEU A 2 -90.36 -109.48
REMARK 500 8 LYS A 14 -78.38 57.88
REMARK 500 9 LEU A 2 -85.90 -172.32
REMARK 500 9 ASP A 12 16.25 -158.57
REMARK 500 10 LEU A 2 -86.00 -82.66
REMARK 500 10 LYS A 14 52.97 -102.99
REMARK 500 11 LEU A 2 -84.92 -82.42
REMARK 500 12 LEU A 2 -87.07 -162.20
REMARK 500 12 SER A 11 40.86 -82.94
REMARK 500 12 ASP A 12 -5.54 -146.22
REMARK 500 12 ASP A 13 87.32 -167.22
REMARK 500 12 LYS A 14 167.26 -48.99
REMARK 500 13 LEU A 2 -91.45 -141.16
REMARK 500 13 SER A 11 30.93 -90.53
REMARK 500 13 ASP A 12 33.17 -161.63
REMARK 500 13 ASP A 13 -95.50 -56.85
REMARK 500 14 LEU A 2 -83.69 -90.79
REMARK 500 14 SER A 11 4.98 -67.34
REMARK 500 15 LEU A 2 -84.56 -95.38
REMARK 500 15 ASP A 12 24.85 -170.82
REMARK 500 15 ASP A 13 -36.42 -157.83
REMARK 500 16 LEU A 2 -87.45 -92.63
REMARK 500 16 SER A 11 30.01 -81.43
REMARK 500 16 ASP A 12 -20.48 -157.10
REMARK 500 16 ASP A 13 99.05 -176.73
REMARK 500
REMARK 500 THIS ENTRY HAS 67 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1GGR RELATED DB: PDB
REMARK 900 HPR-IIA COMPLEX
REMARK 900 RELATED ID: 2F3G RELATED DB: PDB
REMARK 900 X-RAY STRUCTURE OF IIA
DBREF 1O53 A 1 15 UNP P08837 PTGA_ECOLI 1 15
SEQRES 1 A 15 GLY LEU PHE ASP LYS LEU LYS SER LEU VAL SER ASP ASP
SEQRES 2 A 15 LYS LYS
HELIX 1 1 LEU A 2 SER A 11 1 10
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - 23 20 Bytes