Header list of 1m7k.pdb file
Complete list - b 23 2 Bytes
HEADER CHAPERONE 22-JUL-02 1M7K
TITLE SOLUTION STRUCTURE OF THE SODD BAG DOMAIN
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: SILENCER OF DEATH DOMAINS;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: RESIDUES 358-456;
COMPND 5 SYNONYM: BAG-FAMILY MOLECULAR CHAPERONE REGULATOR-4;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21;
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693;
SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21;
SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX6P-1
KEYWDS THREE HELIX BUNDLE, CHAPERONE
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR C.BROCKMANN,D.LEITNER,D.LABUDDE,A.DIEHL,V.SIEVERT,K.BUESSOW,
AUTHOR 2 H.OSCHKINAT
REVDAT 5 23-FEB-22 1M7K 1 REMARK
REVDAT 4 24-FEB-09 1M7K 1 VERSN
REVDAT 3 08-FEB-05 1M7K 1 JRNL
REVDAT 2 18-SEP-02 1M7K 1 AUTHOR
REVDAT 1 07-AUG-02 1M7K 0
JRNL AUTH C.BROCKMANN,D.LEITNER,D.LABUDDE,A.DIEHL,V.SIEVERT,K.BUESSOW,
JRNL AUTH 2 R.KUHNE,H.OSCHKINAT
JRNL TITL THE SOLUTION STRUCTURE OF THE SODD BAG DOMAIN REVEALS
JRNL TITL 2 ADDITIONAL ELECTROSTATIC INTERACTIONS IN THE HSP70 COMPLEXES
JRNL TITL 3 OF SODD SUBFAMILY BAG DOMAINS
JRNL REF FEBS LETT. V. 558 101 2004
JRNL REFN ISSN 0014-5793
JRNL PMID 14759524
JRNL DOI 10.1016/S0014-5793(03)01490-X
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : XWINNMR 2.6, CNS 1.1
REMARK 3 AUTHORS : BRUKER (XWINNMR), BRUNGER, ADAMS, CLORE, DELANO,
REMARK 3 GROS, GROSSE-KUNSTLEVE, JIANG, KUSZEWSKI, NILGES,
REMARK 3 PANNU, READ, RICE, SIMONSON, WARREN (CNS)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: CALCULATED FROM 723 NOE RESTRAINTS, 52
REMARK 3 FROM HYDROGEN BONDS AND 140 DIHEDRAL RESTRAINTS
REMARK 4
REMARK 4 1M7K COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-JUL-02.
REMARK 100 THE DEPOSITION ID IS D_1000016694.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 300
REMARK 210 PH : 6.0
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 1.4MM SODD U-15N,13C; 20MM
REMARK 210 PHOSPHATE BUFFER, PH6.0; 50MM
REMARK 210 NACL;; 1.4MM SODD U-15N,13C;
REMARK 210 20MM PHOSPHATE BUFFER, NA; 50MM
REMARK 210 NACL;
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C
REMARK 210 -SEPARATED_NOESY; 3D_13C-METHYL_
REMARK 210 SELECTIVE_NOESY; 2D NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ
REMARK 210 SPECTROMETER MODEL : DRX
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : XWINNMR 2.6, SPARKY 3.1
REMARK 210 METHOD USED : TORSION ANGLE SIMULATED
REMARK 210 ANNEALING
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 400
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST
REMARK 210 ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465 MODELS 1-20
REMARK 465 RES C SSSEQI
REMARK 465 ASN A 358
REMARK 465 GLN A 359
REMARK 465 ASP A 360
REMARK 465 GLN A 361
REMARK 465 SER A 362
REMARK 465 SER A 363
REMARK 465 SER A 364
REMARK 465 LEU A 365
REMARK 465 PRO A 366
REMARK 465 GLU A 367
REMARK 465 GLU A 368
REMARK 465 CYS A 369
REMARK 465 VAL A 370
REMARK 465 PRO A 371
REMARK 465 SER A 372
REMARK 465 ASP A 373
REMARK 465 GLU A 374
REMARK 465 SER A 375
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 PRO A 377 101.20 -45.23
REMARK 500 1 ILE A 380 -32.34 -37.59
REMARK 500 1 SER A 425 37.96 -96.05
REMARK 500 2 PRO A 377 -177.16 -53.44
REMARK 500 2 LYS A 404 47.11 -90.55
REMARK 500 2 LEU A 412 -70.83 -56.36
REMARK 500 2 GLU A 427 74.01 -66.84
REMARK 500 3 SER A 425 38.02 -93.72
REMARK 500 4 PRO A 377 -175.06 -52.61
REMARK 500 4 LEU A 412 -71.33 -57.46
REMARK 500 4 SER A 425 38.20 -95.89
REMARK 500 4 GLU A 427 79.81 -114.84
REMARK 500 5 SER A 425 37.94 -96.99
REMARK 500 6 GLN A 431 96.43 -59.77
REMARK 500 7 SER A 425 38.07 -97.43
REMARK 500 7 THR A 428 76.18 -165.46
REMARK 500 8 PRO A 377 102.50 -47.36
REMARK 500 9 PRO A 377 105.09 -48.87
REMARK 500 9 PHE A 400 158.75 -46.46
REMARK 500 9 SER A 425 38.27 -86.94
REMARK 500 9 THR A 428 -48.94 -131.82
REMARK 500 10 PRO A 377 170.71 -52.33
REMARK 500 10 THR A 405 -31.24 -131.92
REMARK 500 10 SER A 425 38.08 -94.38
REMARK 500 11 LEU A 412 -71.68 -51.58
REMARK 500 11 SER A 425 38.15 -89.90
REMARK 500 12 ILE A 380 -33.44 -37.80
REMARK 500 12 SER A 425 38.09 -94.12
REMARK 500 12 GLN A 431 108.40 -59.14
REMARK 500 13 PRO A 377 106.53 -57.50
REMARK 500 13 ILE A 380 -32.32 -38.09
REMARK 500 13 SER A 425 38.12 -95.59
REMARK 500 13 GLU A 427 72.34 -108.30
REMARK 500 14 PRO A 377 106.72 -56.74
REMARK 500 14 PRO A 378 96.82 -64.08
REMARK 500 14 LYS A 404 62.70 -68.82
REMARK 500 15 LEU A 412 -71.48 -53.61
REMARK 500 16 PRO A 378 70.27 -65.48
REMARK 500 16 GLN A 431 105.87 -160.36
REMARK 500 17 PRO A 378 57.75 -68.09
REMARK 500 17 GLU A 427 -74.37 -67.00
REMARK 500 17 THR A 428 80.31 56.06
REMARK 500 18 PRO A 377 106.29 -51.93
REMARK 500 18 ILE A 380 -32.13 -39.52
REMARK 500 18 GLU A 427 -64.06 -132.45
REMARK 500 18 THR A 428 -75.67 64.76
REMARK 500 19 PRO A 377 -173.91 -51.57
REMARK 500 19 PRO A 378 40.71 -81.94
REMARK 500 19 SER A 425 38.12 -94.88
REMARK 500 20 LEU A 412 -70.37 -58.27
REMARK 500
REMARK 500 THIS ENTRY HAS 52 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
DBREF 1M7K A 358 456 UNP O95429 BAG4_HUMAN 358 456
SEQRES 1 A 99 ASN GLN ASP GLN SER SER SER LEU PRO GLU GLU CYS VAL
SEQRES 2 A 99 PRO SER ASP GLU SER THR PRO PRO SER ILE LYS LYS ILE
SEQRES 3 A 99 ILE HIS VAL LEU GLU LYS VAL GLN TYR LEU GLU GLN GLU
SEQRES 4 A 99 VAL GLU GLU PHE VAL GLY LYS LYS THR ASP LYS ALA TYR
SEQRES 5 A 99 TRP LEU LEU GLU GLU MET LEU THR LYS GLU LEU LEU GLU
SEQRES 6 A 99 LEU ASP SER VAL GLU THR GLY GLY GLN ASP SER VAL ARG
SEQRES 7 A 99 GLN ALA ARG LYS GLU ALA VAL CYS LYS ILE GLN ALA ILE
SEQRES 8 A 99 LEU GLU LYS LEU GLU LYS LYS GLY
HELIX 1 1 SER A 379 PHE A 400 1 22
HELIX 2 2 ASP A 406 ASP A 424 1 19
HELIX 3 3 GLN A 431 LYS A 455 1 25
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - b 23 2 Bytes