Header list of 1ly7.pdb file
Complete list - c 21 2 Bytes
HEADER UNKNOWN FUNCTION 07-JUN-02 1LY7
TITLE THE SOLUTION STRUCTURE OF THE THE C-TERMINAL DOMAIN OF FRATAXIN, THE
TITLE 2 PROTEIN RESPONSIBLE FOR FRIEDREICH ATAXIA
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: FRATAXIN;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: C-TERMINAL DOMAIN (91-210);
COMPND 5 SYNONYM: FRIEDREICH'S ATAXIA PROTEIN, FXN;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21;
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693;
SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21;
SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET
KEYWDS ALPHA-BETA, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 15
AUTHOR G.MUSCO,G.STIER,B.KOLMERER,S.ADINOLFI,S.MARTIN,T.FRENKIEL,T.GIBSON,
AUTHOR 2 A.PASTORE
REVDAT 4 21-DEC-22 1LY7 1 SEQADV
REVDAT 3 23-FEB-22 1LY7 1 REMARK
REVDAT 2 24-FEB-09 1LY7 1 VERSN
REVDAT 1 26-JUN-02 1LY7 0
SPRSDE 26-JUN-02 1LY7 1DLX
JRNL AUTH G.MUSCO,G.STIER,B.KOLMERER,S.ADINOLFI,S.MARTIN,T.FRENKIEL,
JRNL AUTH 2 T.GIBSON,A.PASTORE
JRNL TITL TOWARDS A STRUCTURAL UNDERSTANDING OF FRIEDREICH'S ATAXIA:
JRNL TITL 2 THE SOLUTION STRUCTURE OF FRATAXIN
JRNL REF STRUCTURE FOLD.DES. V. 8 695 2000
JRNL REFN ISSN 0969-2126
JRNL PMID 10903947
JRNL DOI 10.1016/S0969-2126(00)00158-1
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH G.MUSCO,T.DE TOMMASI,G.STIER,B.KOLMERER,M.BOTTOMLEY,
REMARK 1 AUTH 2 S.ADINOLFI,F.W.MUSKETT,T.J.GIBSON,T.A.FRENKIEL,A.PASTORE
REMARK 1 TITL ASSIGNMENT OF THE 1H, 15N, AND 13C RESONANCES OF THE
REMARK 1 TITL 2 C-TERMINAL DOMAIN OF FRATAXIN, THE PROTEIN RESPONSIBLE FOR
REMARK 1 TITL 3 FRIEDREICH ATAXIA
REMARK 1 REF J.BIOMOL.NMR V. 15 87 1999
REMARK 1 REFN ISSN 0925-2738
REMARK 1 DOI 10.1023/A:1008398832619
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : NMRPIPE 1.7, ARIA 1.0
REMARK 3 AUTHORS : DELAGLIO ET AL. (NMRPIPE), NILGES ET AL. (ARIA)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: ARIA
REMARK 4
REMARK 4 1LY7 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JUN-02.
REMARK 100 THE DEPOSITION ID IS D_1000016403.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 300
REMARK 210 PH : 6.8
REMARK 210 IONIC STRENGTH : 10 MM PHOSPHATE
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 1 MM FRATAXIN. U-15N 10 MM
REMARK 210 PHOSPHATE BUFFER (PH 6.8)90% H2O,
REMARK 210 10% D2O
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N
REMARK 210 -SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 800 MHZ
REMARK 210 SPECTROMETER MODEL : UNITYPLUS; DMX
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : XEASY 1.2, ARIA 1.0
REMARK 210 METHOD USED : SIMULATED ANNEALING
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 50
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH FAVORABLE NON
REMARK 210 -BOND ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 H THR A 149 HD2 PRO A 150 1.34
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 ASP A 91 -27.16 -168.86
REMARK 500 1 LEU A 132 73.67 -160.21
REMARK 500 1 LEU A 140 -79.10 -70.98
REMARK 500 1 GLN A 148 -145.00 58.85
REMARK 500 1 THR A 149 -47.42 -162.50
REMARK 500 1 PRO A 150 -80.15 -26.89
REMARK 500 1 LYS A 152 77.92 46.68
REMARK 500 1 PRO A 159 0.40 -67.14
REMARK 500 1 SER A 160 -71.41 -88.11
REMARK 500 1 LYS A 171 24.55 -142.10
REMARK 500 1 TYR A 175 -157.46 -81.39
REMARK 500 1 SER A 176 -17.63 -145.15
REMARK 500 1 ASP A 178 -60.49 -121.59
REMARK 500 1 ALA A 187 -71.84 -60.97
REMARK 500 1 ASP A 199 84.77 -174.66
REMARK 500 1 LEU A 203 -171.92 -68.64
REMARK 500 2 ASP A 91 -170.12 56.26
REMARK 500 2 GLU A 92 -99.78 54.10
REMARK 500 2 THR A 93 -89.33 48.40
REMARK 500 2 THR A 119 -168.52 -70.78
REMARK 500 2 ASP A 139 -31.85 -172.02
REMARK 500 2 LEU A 140 -74.96 -58.68
REMARK 500 2 GLN A 148 -145.12 -118.13
REMARK 500 2 THR A 149 -49.41 -153.61
REMARK 500 2 PRO A 150 -78.14 -36.38
REMARK 500 2 LYS A 152 87.04 48.59
REMARK 500 2 SER A 160 -68.74 -124.21
REMARK 500 2 SER A 176 52.21 -115.17
REMARK 500 2 HIS A 177 -52.46 -153.39
REMARK 500 2 LEU A 182 -79.15 -65.36
REMARK 500 2 ALA A 187 -73.57 -59.03
REMARK 500 2 GLU A 189 -70.55 -63.13
REMARK 500 2 ASP A 199 85.60 55.52
REMARK 500 2 LYS A 208 50.79 33.35
REMARK 500 3 THR A 93 -70.06 -116.23
REMARK 500 3 THR A 119 -176.14 -65.09
REMARK 500 3 ASP A 122 52.50 -116.92
REMARK 500 3 LEU A 140 -78.27 -97.99
REMARK 500 3 GLN A 148 -138.02 -96.94
REMARK 500 3 THR A 149 -49.81 -155.05
REMARK 500 3 ASN A 151 65.67 -160.14
REMARK 500 3 LYS A 152 77.75 47.94
REMARK 500 3 SER A 176 94.72 -69.02
REMARK 500 3 HIS A 177 -57.83 -179.11
REMARK 500 3 ASP A 178 36.20 179.31
REMARK 500 3 VAL A 180 153.38 61.63
REMARK 500 3 ALA A 187 -70.29 -57.35
REMARK 500 3 GLU A 189 -71.40 -64.28
REMARK 500 3 LYS A 195 49.28 32.25
REMARK 500 3 ASP A 199 92.44 58.48
REMARK 500
REMARK 500 THIS ENTRY HAS 247 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1DLX RELATED DB: PDB
REMARK 900 RELATED ID: 4342 RELATED DB: BMRB
DBREF 1LY7 A 91 210 UNP Q16595 FRDA_HUMAN 91 210
SEQADV 1LY7 MET A 90 UNP Q16595 INITIATING METHIONINE
SEQRES 1 A 121 MET ASP GLU THR THR TYR GLU ARG LEU ALA GLU GLU THR
SEQRES 2 A 121 LEU ASP SER LEU ALA GLU PHE PHE GLU ASP LEU ALA ASP
SEQRES 3 A 121 LYS PRO TYR THR PHE GLU ASP TYR ASP VAL SER PHE GLY
SEQRES 4 A 121 SER GLY VAL LEU THR VAL LYS LEU GLY GLY ASP LEU GLY
SEQRES 5 A 121 THR TYR VAL ILE ASN LYS GLN THR PRO ASN LYS GLN ILE
SEQRES 6 A 121 TRP LEU SER SER PRO SER SER GLY PRO LYS ARG TYR ASP
SEQRES 7 A 121 TRP THR GLY LYS ASN TRP VAL TYR SER HIS ASP GLY VAL
SEQRES 8 A 121 SER LEU HIS GLU LEU LEU ALA ALA GLU LEU THR LYS ALA
SEQRES 9 A 121 LEU LYS THR LYS LEU ASP LEU SER SER LEU ALA TYR SER
SEQRES 10 A 121 GLY LYS ASP ALA
HELIX 1 1 THR A 94 ALA A 114 1 21
HELIX 2 2 SER A 181 LEU A 194 1 14
SHEET 1 A 6 ASP A 122 SER A 126 0
SHEET 2 A 6 THR A 133 GLY A 137 -1 O GLY A 137 N ASP A 122
SHEET 3 A 6 GLY A 141 ASN A 146 -1 O TYR A 143 N VAL A 134
SHEET 4 A 6 ILE A 154 SER A 157 -1 O SER A 157 N VAL A 144
SHEET 5 A 6 ARG A 165 THR A 169 -1 O TYR A 166 N ILE A 154
SHEET 6 A 6 ASN A 172 VAL A 174 -1 O ASN A 172 N THR A 169
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - c 21 2 Bytes