Header list of 1lvz.pdb file
Complete list - 27 20 Bytes
HEADER PEPTIDE BINDING PROTEIN 30-MAY-02 1LVZ
TITLE METARHODOPSIN II BOUND STRUCTURE OF C-TERMINAL PEPTIDE OF ALPHA-
TITLE 2 SUBUNIT OF TRANSDUCIN
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(T), ALPHA-1 SUBUNIT;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: S2 PEPTIDE, RESIDUES 339-349;
COMPND 5 SYNONYM: TRANSDUCIN ALPHA-1 CHAIN;
COMPND 6 ENGINEERED: YES;
COMPND 7 MUTATION: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS;
SOURCE 3 ORGANISM_COMMON: CATTLE;
SOURCE 4 ORGANISM_TAXID: 9913;
SOURCE 5 GENE: GNAT1;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 9 EXPRESSION_SYSTEM_PLASMID: GEV-S2
KEYWDS ALPHA HELIX, RHODOPSIN-TRANSDUCIN COMPLEX, PEPTIDE BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR B.W.KOENIG,G.KONTAXIS,D.C.MITCHELL,J.M.LOUIS,B.J.LITMAN,A.BAX
REVDAT 3 27-OCT-21 1LVZ 1 REMARK SEQADV
REVDAT 2 24-FEB-09 1LVZ 1 VERSN
REVDAT 1 11-SEP-02 1LVZ 0
JRNL AUTH B.W.KOENIG,G.KONTAXIS,D.C.MITCHELL,J.M.LOUIS,B.J.LITMAN,
JRNL AUTH 2 A.BAX
JRNL TITL STRUCTURE AND ORIENTATION OF A G PROTEIN FRAGMENT IN THE
JRNL TITL 2 RECEPTOR BOUND STATE FROM RESIDUAL DIPOLAR COUPLINGS.
JRNL REF J.MOL.BIOL. V. 322 441 2002
JRNL REFN ISSN 0022-2836
JRNL PMID 12217702
JRNL DOI 10.1016/S0022-2836(02)00745-3
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : NMRPIPE 2.1, X-PLOR NIH
REMARK 3 AUTHORS : DELAGLIO (NMRPIPE), A.T. BRUNGER, N. TJANDRA, C.D.
REMARK 3 SCHWIETERS, J. KUSZEWSKI, G.M. CLORE (X-PLOR)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS:
REMARK 3 THE STRUCTURES ARE BASED ON A TOTAL OF 121 NOE-DERIVED
REMARK 3 DISTANCE CONSTRAINTS, 12 NOE-DERIVED DIHEDRAL ANGLE RESTRAINTS,
REMARK 3 AND 38 RESIDUAL DIPOLAR COUPLINGS
REMARK 4
REMARK 4 1LVZ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JUN-02.
REMARK 100 THE DEPOSITION ID IS D_1000016329.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 283
REMARK 210 PH : 6.6
REMARK 210 IONIC STRENGTH : 10 MM HEPES, 20 MM KCL
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 2.6MM S2 PEPTIDE U-15N, 0.063MM
REMARK 210 RHODOPSIN AS PART OF INTACT DISK
REMARK 210 MEMBRANES FROM BOVINE RETINA;
REMARK 210 BUFFER: 10 MM HEPES, 20MM KCL,
REMARK 210 0.05MM DTPA; 2.6MM S2 PEPTIDE U-
REMARK 210 15N, 13C, 0.063MM RHODOPSIN AS
REMARK 210 PART OF INTACT DISK MEMBRANES
REMARK 210 FROM BOVINE RETINA; BUFFER: 10
REMARK 210 MM HEPES, 20MM KCL, 0.05MM DTPA
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; 2D 1H-15N HSQC (W/O 1H
REMARK 210 DECOUPLING); 2D 1H-13C CT-HSQC
REMARK 210 (W/O 1H DECOUPLING)
REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ; 600 MHZ
REMARK 210 SPECTROMETER MODEL : DMX
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : X-PLOR NIH
REMARK 210 METHOD USED : SIMULATED ANNEALING, MOLECULAR
REMARK 210 DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST
REMARK 210 ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: SAMPLE WAS STUDIED IN DARK ADAPTED STATE AND AFTER PHOTO
REMARK 210 ACTIVATION OF RHODOPSIN BY ILLUMINATING THE SAMPLE FOR 60S WITH
REMARK 210 A FOCUSSED MICROSCOPE LIGHT, CHEMICAL SHIFTS OF S2 PEPTIDE ARE
REMARK 210 IDENTICAL IN BOTH STATES, TRNOES AND TRDCS ARE DIFFERENCE VALUES
REMARK 210 BETWEEN THE DARK AND LIGHT-ACTIVATED STATES. ORIENTATION OF THE
REMARK 210 BOUND PEPTIDE RELATIVE TO THE MEMBRANE NORMAL WAS DETERMINED
REMARK 210 FROM RESIDUAL DIPOLAR COUPLINGS. THE MEMBRANE NORMAL THAT
REMARK 210 BELONGS TO MODEL 1 RUNS PARALLEL TO THE Y-AXIS OF THE COORDINATE
REMARK 210 FRAME IN WHICH THE DEPOSITED S2 PEPTIDE COORDINATES ARE
REMARK 210 SPECIFIED.
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500
REMARK 500 REMARK: NULL
REMARK 650
REMARK 650 HELIX
REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 5376 RELATED DB: BMRB
REMARK 900 CHEMICAL SHIFT VALUES OF THE SAME TRANSDUCIN PEPTIDE
DBREF 1LVZ A 1 11 UNP P04695 GNAT1_BOVIN 339 349
SEQADV 1LVZ ARG A 2 UNP P04695 LYS 340 ENGINEERED MUTATION
SEQADV 1LVZ SER A 8 UNP P04695 CYS 346 ENGINEERED MUTATION
SEQRES 1 A 11 ILE ARG GLU ASN LEU LYS ASP SER GLY LEU PHE
HELIX 1 1 ILE A 1 SER A 8 1 8
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - 27 20 Bytes