Header list of 1l2m.pdb file
Complete list - 23 20 Bytes
HEADER VIRAL PROTEIN 22-FEB-02 1L2M
TITLE MINIMIZED AVERAGE STRUCTURE OF THE N-TERMINAL, DNA-BINDING DOMAIN OF
TITLE 2 THE REPLICATION INITIATION PROTEIN FROM A GEMINIVIRUS (TOMATO YELLOW
TITLE 3 LEAF CURL VIRUS-SARDINIA)
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: REP PROTEIN;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: N-TERMINAL DOMAIN (RESIDUES 4-121), DNA-BINDING DOMAIN;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: TOMATO YELLOW LEAF CURL SARDINIA VIRUS;
SOURCE 3 ORGANISM_TAXID: 123735;
SOURCE 4 GENE: REP;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID
KEYWDS A+B FOLD, RBD-LIKE FOLD, VIRAL PROTEIN
EXPDTA SOLUTION NMR
MDLTYP MINIMIZED AVERAGE
AUTHOR R.CAMPOS-OLIVAS,J.M.LOUIS,D.CLEROT,B.GRONENBORN,A.M.GRONENBORN
REVDAT 3 23-FEB-22 1L2M 1 REMARK
REVDAT 2 24-FEB-09 1L2M 1 VERSN
REVDAT 1 18-SEP-02 1L2M 0
JRNL AUTH R.CAMPOS-OLIVAS,J.M.LOUIS,D.CLEROT,B.GRONENBORN,
JRNL AUTH 2 A.M.GRONENBORN
JRNL TITL THE STRUCTURE OF A REPLICATION INITIATOR UNITES DIVERSE
JRNL TITL 2 ASPECTS OF NUCLEIC ACID METABOLISM
JRNL REF PROC.NATL.ACAD.SCI.USA V. 99 10310 2002
JRNL REFN ISSN 0027-8424
JRNL PMID 12130667
JRNL DOI 10.1073/PNAS.152342699
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : NMRPIPE, DYANA
REMARK 3 AUTHORS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1L2M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-FEB-02.
REMARK 100 THE DEPOSITION ID IS D_1000015586.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 6.6
REMARK 210 IONIC STRENGTH : 0.3M
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 0.8-1.0MM [10%-13C;U-99% 15N]
REMARK 210 REP4-121, SODIUM PHOSPHATE 20MM,
REMARK 210 NACL 100MM, DTT 1MM; 0.8-1.0MM
REMARK 210 [U-13C;U-99% 15N] REP4-121,
REMARK 210 SODIUM PHOSPHATE 20MM, NACL
REMARK 210 100MM, DTT 1MM; 0.8-1.0MM [10%-
REMARK 210 13C;U-99% 15N] REP4-121, SODIUM
REMARK 210 PHOSPHATE 20MM, NACL 100MM, DTT
REMARK 210 1MM; 0.8-1.0MM [U-13C;U-99% 15N]
REMARK 210 REP4-121, SODIUM PHOSPHATE 20MM,
REMARK 210 NACL 100MM, DTT 1MM
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; 3D_15N
REMARK 210 -SEPARATED_NOESY; HNHA; HNHB; 4D_
REMARK 210 13C/15N-SEPARATED_NOESY; 2D
REMARK 210 HNCOCG AROM; 2D HNCO AROM; 4D
REMARK 210 13C,13C NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 750 MHZ; 800
REMARK 210 MHZ
REMARK 210 SPECTROMETER MODEL : DMX; DRX
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRVIEW 4.1.1, TALOS, DYANA
REMARK 210 METHOD USED : TORSION ANGLE SIMULATED
REMARK 210 ANHEALING
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1
REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL
REMARK 210
REMARK 210 REMARK: THIS ENTRY CONTAINS THE MINIMIZED AVERAGE STRUCTURE OF
REMARK 210 THE 30-CONFORMER ENSEMBLE DEPOSITED UNDER CODE 1L5I. THE
REMARK 210 SINGLE MODEL INCLUDED IN THIS ENTRY IS A GOOD REPRESENTATION OF THE
REMARK 210 30-CONFORMER ENSEMBLE.
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 LYS A 20 42.95 39.04
REMARK 500 THR A 39 -108.66 -115.80
REMARK 500 ASN A 40 137.67 -171.53
REMARK 500 LEU A 42 -84.54 -103.21
REMARK 500 CYS A 70 69.48 -108.46
REMARK 500 THR A 71 31.95 -96.02
REMARK 500 GLN A 73 38.66 -87.87
REMARK 500 LYS A 95 -143.90 -61.88
REMARK 500 SER A 97 142.51 156.81
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 5297 RELATED DB: BMRB
REMARK 900 1H, 13C, AND 15N NMR ASSIGNMENTS. COUPLING CONSTANTS HNHA.
REMARK 900 RELATED ID: 1L5I RELATED DB: PDB
REMARK 900 ENSEMBLE OF 30 CONFORMERS
DBREF 1L2M A 4 121 UNP P27260 VAL1_TYLCS 4 121
SEQRES 1 A 118 SER GLY ARG PHE SER ILE LYS ALA LYS ASN TYR PHE LEU
SEQRES 2 A 118 THR TYR PRO LYS CYS ASP LEU THR LYS GLU ASN ALA LEU
SEQRES 3 A 118 SER GLN ILE THR ASN LEU GLN THR PRO THR ASN LYS LEU
SEQRES 4 A 118 PHE ILE LYS ILE CYS ARG GLU LEU HIS GLU ASN GLY GLU
SEQRES 5 A 118 PRO HIS LEU HIS ILE LEU ILE GLN PHE GLU GLY LYS TYR
SEQRES 6 A 118 ASN CYS THR ASN GLN ARG PHE PHE ASP LEU VAL SER PRO
SEQRES 7 A 118 THR ARG SER ALA HIS PHE HIS PRO ASN ILE GLN GLY ALA
SEQRES 8 A 118 LYS SER SER SER ASP VAL LYS SER TYR ILE ASP LYS ASP
SEQRES 9 A 118 GLY ASP VAL LEU GLU TRP GLY THR PHE GLN ILE ASP GLY
SEQRES 10 A 118 ARG
HELIX 1 1 THR A 24 LEU A 35 1 12
HELIX 2 2 SER A 98 LYS A 106 1 9
SHEET 1 A 5 ASN A 90 ALA A 94 0
SHEET 2 A 5 LYS A 10 TYR A 18 -1 N PHE A 15 O GLN A 92
SHEET 3 A 5 PRO A 56 ASN A 69 -1 O ILE A 62 N TYR A 14
SHEET 4 A 5 LYS A 41 LEU A 50 -1 N LYS A 45 O LEU A 61
SHEET 5 A 5 LEU A 111 TRP A 113 -1 O TRP A 113 N ILE A 44
SHEET 1 B 2 LEU A 78 VAL A 79 0
SHEET 2 B 2 HIS A 86 PHE A 87 -1 O PHE A 87 N LEU A 78
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
Complete list - 23 20 Bytes