Header list of 1kwj.pdb file
Complete list - 27 20 Bytes
HEADER OXYGEN STORAGE/TRANSPORT 29-JAN-02 1KWJ
TITLE SOLUTION STRUCTURE DETERMINATION OF THE FULLY OXIDIZED DOUBLE MUTANT
TITLE 2 K9-10A CYTOCHROME C7 FROM DESULFUROMONAS ACETOXIDANS, MINIMIZED
TITLE 3 AVERAGE STRUCTURE
CAVEAT 1KWJ CHIRALITY ERROR AT CA CENTER OF ALA A 1
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: CYTOCHROME C7;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: CYTOCHROME C3, CYTOCHROME C551.5;
COMPND 5 ENGINEERED: YES;
COMPND 6 MUTATION: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: DESULFUROMONAS ACETOXIDANS;
SOURCE 3 ORGANISM_TAXID: 891;
SOURCE 4 EXPRESSION_SYSTEM: DESULFOVIBRIO DESULFURICANS;
SOURCE 5 EXPRESSION_SYSTEM_TAXID: 876;
SOURCE 6 EXPRESSION_SYSTEM_STRAIN: G201
KEYWDS AUTOMATIC ASSIGNMENT, CYTOCHROME C7, ELECTRON TRANSFER, MULTIHEME
KEYWDS 2 CYTOCHROMES, NMR SOLUTION STRUCTURE, OXYGEN STORAGE-TRANSPORT
KEYWDS 3 COMPLEX
EXPDTA SOLUTION NMR
AUTHOR M.ASSFALG,I.BERTINI,P.TURANO,M.BRUSCHI,M.C.DURAND,M.T.GIUDICI-
AUTHOR 2 ORTICONI,A.DOLLA
REVDAT 4 27-OCT-21 1KWJ 1 REMARK SEQADV LINK
REVDAT 3 24-FEB-09 1KWJ 1 VERSN
REVDAT 2 13-MAR-02 1KWJ 1 JRNL REMARK TITLE
REVDAT 1 06-FEB-02 1KWJ 0
JRNL AUTH M.ASSFALG,I.BERTINI,P.TURANO,M.BRUSCHI,M.C.DURAND,
JRNL AUTH 2 M.T.GIUDICI-ORTICONI,A.DOLLA
JRNL TITL A QUICK SOLUTION STRUCTURE DETERMINATION OF THE FULLY
JRNL TITL 2 OXIDIZED DOUBLE MUTANT K9-10A CYTOCHROME C7 FROM
JRNL TITL 3 DESULFUROMONAS ACETOXIDANS AND MECHANISTIC IMPLICATIONS.
JRNL REF J.BIOMOL.NMR V. 22 107 2002
JRNL REFN ISSN 0925-2738
JRNL PMID 11883773
JRNL DOI 10.1023/A:1014202405862
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PSEUDYANA 1.5, AMBER 5.0
REMARK 3 AUTHORS : GUENTERT, P., WUETHRICH, K. (PSEUDYANA), KOLMAN,
REMARK 3 CASE (AMBER)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1KWJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JAN-02.
REMARK 100 THE DEPOSITION ID IS D_1000015409.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 6.5
REMARK 210 IONIC STRENGTH : 100 MM PHOSPHATE
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 2MM CYTOCHROME C7, 100 MM SODIUM
REMARK 210 PHOSPHATE BUFFER, PH 6.5
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ
REMARK 210 SPECTROMETER MODEL : AVANCE
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NULL
REMARK 210 METHOD USED : SIMULATED ANNEALING IN TORSION
REMARK 210 ANGLE SPACE; RESTRAINED ENERGY
REMARK 210 MINIMIZATION
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1
REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASP A 2 -133.56 -82.30
REMARK 500 THR A 14 93.29 63.53
REMARK 500 LYS A 18 -75.21 -67.02
REMARK 500 CYS A 26 -59.51 62.48
REMARK 500 GLU A 31 82.01 -66.35
REMARK 500 ASP A 47 -59.40 -148.84
REMARK 500 CYS A 49 -62.33 67.60
REMARK 500 ASN A 56 -168.67 -128.56
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 HEC A 130 FE
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HIS A 17 NE2
REMARK 620 2 HEC A 130 NA 91.4
REMARK 620 3 HEC A 130 NB 92.4 92.8
REMARK 620 4 HEC A 130 NC 88.4 177.6 89.6
REMARK 620 5 HEC A 130 ND 87.3 88.5 178.7 89.1
REMARK 620 6 HIS A 30 NE2 175.4 92.7 89.6 87.4 90.7
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 HEC A 153 FE
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HIS A 20 NE2
REMARK 620 2 HEC A 153 NA 91.1
REMARK 620 3 HEC A 153 NB 91.7 89.8
REMARK 620 4 HEC A 153 NC 89.5 179.1 90.8
REMARK 620 5 HEC A 153 ND 87.0 90.5 178.6 88.9
REMARK 620 6 HIS A 53 NE2 177.4 90.3 90.5 89.1 90.8
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 HEC A 166 FE
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HIS A 45 NE2
REMARK 620 2 HEC A 166 NA 91.8
REMARK 620 3 HEC A 166 NB 89.6 91.3
REMARK 620 4 HEC A 166 NC 91.2 176.9 89.0
REMARK 620 5 HEC A 166 ND 89.1 90.2 178.1 89.6
REMARK 620 6 HIS A 66 NE2 177.3 88.1 93.0 88.9 88.2
REMARK 620 N 1 2 3 4 5
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 130
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 153
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 166
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1EHJ RELATED DB: PDB
REMARK 900 1EHJ CONTAINS THE ENERGY MINIMIZED AVERAGE SOLUTION STRUCTURE OF
REMARK 900 THE FULLY REDUCED NATIVE CYTOCHROME C7 FROM DESULFUROMONAS
REMARK 900 ACETOXIDANS
REMARK 900 RELATED ID: 1F22 RELATED DB: PDB
REMARK 900 1F22 CONTAINS THE 35 SOLUTION STRUCTURES FAMILY OF THE FULLY
REMARK 900 REDUCED NATIVE CYTOCHROME C7 FROM DESULFUROMONAS ACETOXIDANS
REMARK 900 RELATED ID: 1NEW RELATED DB: PDB
REMARK 900 1NEW CONTAINS 18 SOLUTION STRUCTURES OF THE FULLY OXIDIZED NATIVE
REMARK 900 CYTOCHROME C7 FROM DESULFUROMONAS ACETOXIDANS
REMARK 900 RELATED ID: 2NEW RELATED DB: PDB
REMARK 900 2NEW CONTAINS 17 SOLUTION STRUCTURES OF THE FULLY OXIDIZED NATIVE
REMARK 900 CYTOCHROME C7 FROM DESULFUROMONAS ACETOXIDANS
REMARK 900 RELATED ID: 1HH5 RELATED DB: PDB
REMARK 900 1HH5 CONTAINS THE X-RAY STRUCTURE OF THE FULLY OXIDIZED NATIVE
REMARK 900 CYTOCHROME C7 FROM DESULFUROMONAS ACETOXIDANS
REMARK 900 RELATED ID: 1L3O RELATED DB: PDB
REMARK 900 CONTAINS THE RELATED 35 STRUCTURE ENSEMBLE
DBREF 1KWJ A 1 68 UNP P00137 CYC3_DESAC 1 68
SEQADV 1KWJ ALA A 9 UNP P00137 LYS 9 ENGINEERED MUTATION
SEQADV 1KWJ ALA A 10 UNP P00137 LYS 10 ENGINEERED MUTATION
SEQRES 1 A 68 ALA ASP VAL VAL THR TYR GLU ASN ALA ALA GLY ASN VAL
SEQRES 2 A 68 THR PHE ASP HIS LYS ALA HIS ALA GLU LYS LEU GLY CYS
SEQRES 3 A 68 ASP ALA CYS HIS GLU GLY THR PRO ALA LYS ILE ALA ILE
SEQRES 4 A 68 ASP LYS LYS SER ALA HIS LYS ASP ALA CYS LYS THR CYS
SEQRES 5 A 68 HIS LYS SER ASN ASN GLY PRO THR LYS CYS GLY GLY CYS
SEQRES 6 A 68 HIS ILE LYS
HET HEC A 130 75
HET HEC A 153 75
HET HEC A 166 75
HETNAM HEC HEME C
FORMUL 2 HEC 3(C34 H34 FE N4 O4)
HELIX 1 1 HIS A 17 GLY A 25 1 9
HELIX 2 2 CYS A 26 HIS A 30 5 5
HELIX 3 3 LYS A 42 ASP A 47 1 6
HELIX 4 4 CYS A 49 ASN A 56 1 8
HELIX 5 5 LYS A 61 HIS A 66 1 6
SHEET 1 A 2 VAL A 3 VAL A 4 0
SHEET 2 A 2 PHE A 15 ASP A 16 -1 O PHE A 15 N VAL A 4
LINK SG CYS A 26 CAB HEC A 130 1555 1555 1.81
LINK SG CYS A 29 CAC HEC A 130 1555 1555 1.82
LINK SG CYS A 49 CAB HEC A 153 1555 1555 1.82
LINK SG CYS A 52 CAC HEC A 153 1555 1555 1.81
LINK SG CYS A 62 CAB HEC A 166 1555 1555 1.82
LINK SG CYS A 65 CAC HEC A 166 1555 1555 1.82
LINK NE2 HIS A 17 FE HEC A 130 1555 1555 1.98
LINK NE2 HIS A 20 FE HEC A 153 1555 1555 1.99
LINK NE2 HIS A 30 FE HEC A 130 1555 1555 1.99
LINK NE2 HIS A 45 FE HEC A 166 1555 1555 1.98
LINK NE2 HIS A 53 FE HEC A 153 1555 1555 2.01
LINK NE2 HIS A 66 FE HEC A 166 1555 1555 1.99
SITE 1 AC1 14 ALA A 1 TYR A 6 HIS A 17 HIS A 20
SITE 2 AC1 14 ALA A 21 CYS A 26 CYS A 29 HIS A 30
SITE 3 AC1 14 PRO A 34 ALA A 35 LYS A 36 ILE A 37
SITE 4 AC1 14 ILE A 39 HEC A 153
SITE 1 AC2 9 VAL A 13 PHE A 15 HIS A 20 LYS A 23
SITE 2 AC2 9 ALA A 28 CYS A 49 CYS A 52 HIS A 53
SITE 3 AC2 9 HEC A 130
SITE 1 AC3 11 ASN A 8 ALA A 9 ALA A 10 ASP A 40
SITE 2 AC3 11 LYS A 41 ALA A 44 HIS A 45 CYS A 49
SITE 3 AC3 11 CYS A 62 CYS A 65 HIS A 66
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
Complete list - 27 20 Bytes