Header list of 1kkd.pdb file
Complete list - b 23 2 Bytes
HEADER SIGNALING PROTEIN 07-DEC-01 1KKD
TITLE SOLUTION STRUCTURE OF THE CALMODULIN BINDING DOMAIN (CAMBD) OF SMALL
TITLE 2 CONDUCTANCE CA2+-ACTIVATED POTASSIUM CHANNELS (SK2)
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL
COMPND 3 PROTEIN 2;
COMPND 4 CHAIN: A;
COMPND 5 FRAGMENT: CYTOPLASMIC CALMODULIN BINDING DOMAIN (CAMBD);
COMPND 6 SYNONYM: CALCIUM-ACTIVATED POTASSIUM CHANNEL RSK2; SK2;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS;
SOURCE 3 ORGANISM_COMMON: NORWAY RAT;
SOURCE 4 ORGANISM_TAXID: 10116;
SOURCE 5 GENE: SK2 (KCNN2);
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET23B
KEYWDS SMALL-CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL, CALMODULIN
KEYWDS 2 BINDING DOMAIN (CAMBD), CHANNEL GATING, SIGNALING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 23
AUTHOR R.WISSMANN,W.BILDL,H.NEUMANN,A.F.RIVARD,N.KLOECKER,D.WEITZ,U.SCHULTE,
AUTHOR 2 J.P.ADELMAN,D.BENTROP,B.FAKLER
REVDAT 5 23-FEB-22 1KKD 1 REMARK SEQADV
REVDAT 4 24-FEB-09 1KKD 1 VERSN
REVDAT 3 01-APR-03 1KKD 1 JRNL
REVDAT 2 08-FEB-02 1KKD 1 JRNL
REVDAT 1 14-DEC-01 1KKD 0
JRNL AUTH R.WISSMANN,W.BILDL,H.NEUMANN,A.F.RIVARD,N.KLOCKER,D.WEITZ,
JRNL AUTH 2 U.SCHULTE,J.P.ADELMAN,D.BENTROP,B.FAKLER
JRNL TITL A HELICAL REGION IN THE C TERMINUS OF SMALL-CONDUCTANCE
JRNL TITL 2 CA2+-ACTIVATED K+ CHANNELS CONTROLS ASSEMBLY WITH
JRNL TITL 3 APO-CALMODULIN.
JRNL REF J.BIOL.CHEM. V. 277 4558 2002
JRNL REFN ISSN 0021-9258
JRNL PMID 11723128
JRNL DOI 10.1074/JBC.M109240200
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH J.E.KEEN,R.KHAWALED,D.L.FARRENS,T.NEELANDS,A.RIVARD,
REMARK 1 AUTH 2 C.T.BOND,A.JANOWSKY,B.FAKLER,J.P.ADELMAN,J.MAYLIE
REMARK 1 TITL DOMAINS RESPONSIBLE FOR CONSTITUTIVE AND CA2+-DEPENDENT
REMARK 1 TITL 2 INTERACTIONS BETWEEN CALMODULIN AND SMALL CONDUCTANCE CA2+-
REMARK 1 TITL 3 ACTIVATED POTASSIUM CHANNELS
REMARK 1 REF J.NEUROSCI. V. 19 8830 1999
REMARK 1 REFN ISSN 0270-6474
REMARK 1 REFERENCE 2
REMARK 1 AUTH X.-M.XIA,B.FAKLER,A.RIVARD,G.WAYMAN,T.JOHNSON-PAIS,J.E.KEEN,
REMARK 1 AUTH 2 T.ISHII,B.HIRSCHBERG,C.T.BOND,S.LUTSENKO,J.MAYLIE,
REMARK 1 AUTH 3 J.P.ADELMAN
REMARK 1 TITL MECHANISM OF CALCIUM GATING IN SMALL-CONDUCTANCE
REMARK 1 TITL 2 CALCIUM-ACTIVATED POTASSIUM CHANNELS
REMARK 1 REF NATURE V. 395 503 1998
REMARK 1 REFN ISSN 0028-0836
REMARK 1 DOI 10.1038/26758
REMARK 1 REFERENCE 3
REMARK 1 AUTH M.A.SCHUMACHER,A.F.RIVARD,H.P.BAECHINGER,J.P.ADELMAN
REMARK 1 TITL STRUCTURE OF THE GATING DOMAIN OF A CA2+-ACTIVATED K+
REMARK 1 TITL 2 CHANNEL COMPLEXED WITH CA2+/CALMODULIN
REMARK 1 REF NATURE V. 410 1120 2001
REMARK 1 REFN ISSN 0028-0836
REMARK 1 DOI 10.1038/35074145
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : XWINNMR 2.6, DYANA 1.5
REMARK 3 AUTHORS : BRUKER (XWINNMR), MUMENTHALER, GUENTERT (DYANA)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: SEE TABLE 1 IN THE PRIMARY CITATION FOR
REMARK 3 STRUCTURAL STATISTICS
REMARK 4
REMARK 4 1KKD COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-DEC-01.
REMARK 100 THE DEPOSITION ID IS D_1000015045.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298; 298; 298; 298
REMARK 210 PH : 3.5; 3.5; 3.5; 3.5
REMARK 210 IONIC STRENGTH : 250 MM; 250 MM; 250 MM; 250 MM
REMARK 210 PRESSURE : AMBIENT; AMBIENT; AMBIENT;
REMARK 210 AMBIENT
REMARK 210 SAMPLE CONTENTS : 0.5 MM U-15N,13C CAMBD (RESIDUES
REMARK 210 396-487 OF RAT SK2); 250 MM NACL,
REMARK 210 0.05 % NA-AZIDE; 1.2 MM U-15N
REMARK 210 CAMBD (RESIDUES 396-487 OF RAT
REMARK 210 SK2); 250 MM NACL, 0.05 % NA-
REMARK 210 AZIDE; 1 MM CAMBD (RESIDUES 396-
REMARK 210 487 OF RAT SK2); 250 MM NACL,
REMARK 210 0.05 % NA-AZIDE; 1 MM CAMBD
REMARK 210 (RESIDUES 396-487 OF RAT SK2);
REMARK 210 250 MM NACL, 0.05 % NA-AZIDE
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; HNHA; 2D
REMARK 210 NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ
REMARK 210 SPECTROMETER MODEL : AVANCE
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : AURELIA 2.7.5, XEASY 1.3.13,
REMARK 210 DYANA 1.5
REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION
REMARK 210 ANGLE DYNAMICS
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 300
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 23
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST
REMARK 210 RESTRAINT VIOLATIONS,TARGET
REMARK 210 FUNCTION
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 22
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465 MODELS 1-23
REMARK 465 RES C SSSEQI
REMARK 465 MET A -1
REMARK 465 GLY A 0
REMARK 465 LEU A 93
REMARK 465 GLU A 94
REMARK 465 HIS A 95
REMARK 465 HIS A 96
REMARK 465 HIS A 97
REMARK 465 HIS A 98
REMARK 465 HIS A 99
REMARK 465 HIS A 100
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 GLU A 4 -173.80 47.26
REMARK 500 1 LEU A 5 177.85 62.06
REMARK 500 1 THR A 6 58.88 37.51
REMARK 500 1 ALA A 8 126.71 66.27
REMARK 500 1 GLU A 9 13.80 -140.47
REMARK 500 1 HIS A 11 131.80 66.71
REMARK 500 1 VAL A 12 130.74 -177.92
REMARK 500 1 ASN A 14 37.64 -92.74
REMARK 500 1 PHE A 15 171.91 -52.31
REMARK 500 1 MET A 17 -54.75 76.41
REMARK 500 1 ASP A 18 105.15 178.41
REMARK 500 1 THR A 19 60.53 -111.97
REMARK 500 1 ARG A 24 -156.95 -79.48
REMARK 500 1 VAL A 25 48.74 -85.51
REMARK 500 1 LYS A 26 29.41 82.61
REMARK 500 1 ALA A 30 -83.50 62.60
REMARK 500 1 LEU A 33 -59.91 69.79
REMARK 500 1 LEU A 38 -44.71 -141.06
REMARK 500 1 TYR A 40 142.12 -34.47
REMARK 500 1 ASN A 42 -60.96 73.81
REMARK 500 1 LYS A 44 58.19 -168.45
REMARK 500 1 LEU A 45 68.66 -104.83
REMARK 500 1 ILE A 49 164.29 -44.33
REMARK 500 1 ASP A 50 112.91 64.00
REMARK 500 1 HIS A 51 -41.99 -170.15
REMARK 500 1 VAL A 54 101.86 66.12
REMARK 500 1 ARG A 55 -150.15 -129.99
REMARK 500 1 HIS A 57 104.56 -174.24
REMARK 500 1 GLN A 58 -59.32 72.33
REMARK 500 1 LYS A 60 165.01 -44.84
REMARK 500 1 ILE A 65 -109.79 -100.97
REMARK 500 1 LEU A 68 177.66 67.98
REMARK 500 1 ARG A 69 80.75 65.87
REMARK 500 1 SER A 70 80.43 -172.60
REMARK 500 1 LYS A 72 117.23 -164.87
REMARK 500 1 GLU A 74 172.99 54.19
REMARK 500 1 GLN A 75 174.43 -48.11
REMARK 500 1 ARG A 76 82.90 62.13
REMARK 500 1 ASN A 79 -39.57 -171.88
REMARK 500 1 GLN A 81 97.37 53.58
REMARK 500 1 ASN A 83 118.12 -171.46
REMARK 500 1 VAL A 86 55.34 -114.80
REMARK 500 1 LEU A 88 31.25 37.70
REMARK 500 1 ALA A 89 -69.39 -155.88
REMARK 500 2 LYS A 2 147.55 69.41
REMARK 500 2 LEU A 5 145.49 -177.14
REMARK 500 2 THR A 6 87.94 39.51
REMARK 500 2 ALA A 8 126.74 -176.56
REMARK 500 2 GLU A 9 13.89 -140.53
REMARK 500 2 VAL A 12 130.09 -175.98
REMARK 500
REMARK 500 THIS ENTRY HAS 1058 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1G4Y RELATED DB: PDB
REMARK 900 THE CRYSTAL STRUCTURE OF THE SAME PROTEIN COMPLEXED WITH CA2+-
REMARK 900 LOADED CALMODULIN
DBREF 1KKD A 1 92 UNP P70604 KCNN2_RAT 396 487
SEQADV 1KKD MET A -1 UNP P70604 CLONING ARTIFACT
SEQADV 1KKD GLY A 0 UNP P70604 CLONING ARTIFACT
SEQADV 1KKD LEU A 93 UNP P70604 EXPRESSION TAG
SEQADV 1KKD GLU A 94 UNP P70604 EXPRESSION TAG
SEQADV 1KKD HIS A 95 UNP P70604 EXPRESSION TAG
SEQADV 1KKD HIS A 96 UNP P70604 EXPRESSION TAG
SEQADV 1KKD HIS A 97 UNP P70604 EXPRESSION TAG
SEQADV 1KKD HIS A 98 UNP P70604 EXPRESSION TAG
SEQADV 1KKD HIS A 99 UNP P70604 EXPRESSION TAG
SEQADV 1KKD HIS A 100 UNP P70604 EXPRESSION TAG
SEQRES 1 A 102 MET GLY ARG LYS LEU GLU LEU THR LYS ALA GLU LYS HIS
SEQRES 2 A 102 VAL HIS ASN PHE MET MET ASP THR GLN LEU THR LYS ARG
SEQRES 3 A 102 VAL LYS ASN ALA ALA ALA ASN VAL LEU ARG GLU THR TRP
SEQRES 4 A 102 LEU ILE TYR LYS ASN THR LYS LEU VAL LYS LYS ILE ASP
SEQRES 5 A 102 HIS ALA LYS VAL ARG LYS HIS GLN ARG LYS PHE LEU GLN
SEQRES 6 A 102 ALA ILE HIS GLN LEU ARG SER VAL LYS MET GLU GLN ARG
SEQRES 7 A 102 LYS LEU ASN ASP GLN ALA ASN THR LEU VAL ASP LEU ALA
SEQRES 8 A 102 LYS THR GLN LEU GLU HIS HIS HIS HIS HIS HIS
HELIX 1 1 GLU A 35 TYR A 40 1 6
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - b 23 2 Bytes