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HEADER PROTEIN BINDING 17-JAN-02 1J57 TITLE NUIA COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUIA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOSTOC SP.; SOURCE 3 ORGANISM_TAXID: 103690; SOURCE 4 STRAIN: PCC 7120; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEASE A INHIBITOR, NUIA, NUCLEASE A, NUCA, PR-1-LIKE, NUCLEASE KEYWDS 2 INHIBITOR, PROTEIN BINDING EXPDTA SOLUTION NMR MDLTYP MINIMIZED AVERAGE AUTHOR T.W.KIRBY,G.A.MUELLER,E.F.DEROSE,M.S.LEBETKIN,G.MEISS,A.PINGOUD, AUTHOR 2 R.E.LONDON REVDAT 3 13-JUL-11 1J57 1 VERSN REVDAT 2 24-FEB-09 1J57 1 VERSN REVDAT 1 04-DEC-02 1J57 0 JRNL AUTH T.W.KIRBY,G.A.MUELLER,E.F.DEROSE,M.S.LEBETKIN,G.MEISS, JRNL AUTH 2 A.PINGOUD,R.E.LONDON JRNL TITL THE NUCLEASE A INHIBITOR REPRESENTS A NEW VARIATION OF THE JRNL TITL 2 RARE PR-1 FOLD. JRNL REF J.MOL.BIOL. V. 320 771 2002 JRNL REFN ISSN 0022-2836 JRNL PMID 12095254 JRNL DOI 10.1016/S0022-2836(02)00460-6 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 1.0 REMARK 3 AUTHORS : NILGES REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1J57 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-FEB-02. REMARK 100 THE RCSB ID CODE IS RCSB001627. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1ATM REMARK 210 SAMPLE CONTENTS : 3.3 MM NUIA 15N, 13C, 1H; 90 MM REMARK 210 DEUTERATED TRIS; REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N- REMARK 210 SEPARATED_NOESY; 4D_13C/15N- REMARK 210 SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 1.8, NMRVIEW 5.0.4, CNS REMARK 210 1.0 REMARK 210 METHOD USED : SIMULATED ANNEALING TORSION REMARK 210 ANGLE DYNAMICS FOLLOWED BY REMARK 210 CARTESIAN DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 160 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H THR A 128 HD3 PRO A 129 1.09 REMARK 500 H MET A 30 H TYR A 35 1.11 REMARK 500 HA SER A 31 HA VAL A 140 1.14 REMARK 500 HA THR A 12 HB3 PRO A 129 1.17 REMARK 500 HD2 PRO A 129 H ASN A 132 1.25 REMARK 500 HG2 GLU A 86 H GLU A 89 1.28 REMARK 500 HB3 LEU A 55 H GLY A 61 1.28 REMARK 500 HB3 PRO A 81 HB2 TYR A 85 1.34 REMARK 500 HG13 ILE A 71 HB2 GLU A 101 1.36 REMARK 500 HA GLU A 89 HB VAL A 92 1.36 REMARK 500 HB3 ALA A 46 HB2 ASN A 132 1.38 REMARK 500 HD11 ILE A 16 HB3 LEU A 107 1.38 REMARK 500 HB2 GLU A 52 HE22 GLN A 62 1.39 REMARK 500 HG2 PRO A 81 HA ASN A 90 1.41 REMARK 500 HA ILE A 53 HE21 GLN A 56 1.42 REMARK 500 HD23 LEU A 55 HB3 TYR A 113 1.43 REMARK 500 HA ASN A 13 HB ILE A 16 1.44 REMARK 500 HB2 SER A 31 HG3 LYS A 139 1.44 REMARK 500 HB2 PRO A 48 H VAL A 49 1.46 REMARK 500 HG22 ILE A 71 HB3 ASN A 109 1.47 REMARK 500 HG SER A 31 HG3 GLU A 32 1.47 REMARK 500 HA VAL A 39 HA ILE A 136 1.47 REMARK 500 HD21 LEU A 55 HD22 LEU A 115 1.47 REMARK 500 HZ PHE A 29 HB2 ALA A 78 1.47 REMARK 500 HD1 HIS A 2 H HIS A 4 1.50 REMARK 500 HG13 VAL A 122 HG22 THR A 138 1.50 REMARK 500 HB2 PRO A 110 HG11 VAL A 124 1.51 REMARK 500 H ALA A 130 H GLY A 131 1.52 REMARK 500 HA ILE A 125 HA3 GLY A 135 1.53 REMARK 500 H GLU A 52 H ILE A 53 1.54 REMARK 500 HD11 LEU A 20 HA SER A 105 1.55 REMARK 500 HA GLU A 43 HD11 LEU A 133 1.56 REMARK 500 HD2 PRO A 129 H ALA A 130 1.56 REMARK 500 HD21 LEU A 20 HG21 ILE A 136 1.57 REMARK 500 HA GLU A 117 HA THR A 143 1.57 REMARK 500 HD1 PHE A 37 HB THR A 138 1.57 REMARK 500 H ASP A 63 H ALA A 64 1.58 REMARK 500 OE1 GLN A 19 H LEU A 20 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 4 -157.72 56.22 REMARK 500 HIS A 6 15.50 -151.44 REMARK 500 LYS A 11 37.29 166.76 REMARK 500 THR A 12 -172.22 -68.33 REMARK 500 LEU A 27 40.97 -90.76 REMARK 500 SER A 31 -152.56 103.56 REMARK 500 GLU A 32 -1.13 -58.79 REMARK 500 SER A 33 -134.67 -162.22 REMARK 500 SER A 45 -178.56 -58.77 REMARK 500 ALA A 46 159.79 84.68 REMARK 500 PRO A 48 -127.24 -100.41 REMARK 500 HIS A 51 83.16 -61.32 REMARK 500 GLU A 52 -6.87 171.12 REMARK 500 THR A 58 -84.21 -104.13 REMARK 500 HIS A 60 96.60 50.64 REMARK 500 ASP A 63 -1.28 -147.29 REMARK 500 THR A 79 -9.36 96.48 REMARK 500 ASP A 83 -27.14 164.27 REMARK 500 TYR A 85 -100.88 12.52 REMARK 500 ASN A 106 -45.93 74.07 REMARK 500 ASN A 109 98.03 -41.12 REMARK 500 PRO A 110 157.47 -48.22 REMARK 500 VAL A 118 -51.04 105.60 REMARK 500 THR A 128 27.56 -170.46 REMARK 500 ASN A 132 108.76 158.96 REMARK 500 LEU A 133 44.35 153.03 REMARK 500 ALA A 134 136.18 -177.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 MET A 30 24.3 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1KTU RELATED DB: PDB REMARK 900 1KTU REPRESENTS THE ENSEMBLE OF 7 STRUCTURES. DBREF 1J57 A 10 143 UNP Q44296 Q44296_9NOST 2 135 SEQADV 1J57 MET A 1 UNP Q44296 CLONING ARTIFACT SEQADV 1J57 HIS A 2 UNP Q44296 EXPRESSION TAG SEQADV 1J57 HIS A 3 UNP Q44296 EXPRESSION TAG SEQADV 1J57 HIS A 4 UNP Q44296 EXPRESSION TAG SEQADV 1J57 HIS A 5 UNP Q44296 EXPRESSION TAG SEQADV 1J57 HIS A 6 UNP Q44296 EXPRESSION TAG SEQADV 1J57 HIS A 7 UNP Q44296 EXPRESSION TAG SEQADV 1J57 GLY A 8 UNP Q44296 CLONING ARTIFACT SEQADV 1J57 SER A 9 UNP Q44296 CLONING ARTIFACT SEQRES 1 A 143 MET HIS HIS HIS HIS HIS HIS GLY SER THR LYS THR ASN SEQRES 2 A 143 SER GLU ILE LEU GLU GLN LEU LYS GLN ALA SER ASP GLY SEQRES 3 A 143 LEU LEU PHE MET SER GLU SER GLU TYR PRO PHE GLU VAL SEQRES 4 A 143 PHE LEU TRP GLU GLY SER ALA PRO PRO VAL THR HIS GLU SEQRES 5 A 143 ILE VAL LEU GLN GLN THR GLY HIS GLY GLN ASP ALA PRO SEQRES 6 A 143 PHE LYS VAL VAL ASP ILE ASP SER PHE PHE SER ARG ALA SEQRES 7 A 143 THR THR PRO GLN ASP TRP TYR GLU ASP GLU GLU ASN ALA SEQRES 8 A 143 VAL VAL ALA LYS PHE GLN LYS LEU LEU GLU VAL ILE LYS SEQRES 9 A 143 SER ASN LEU LYS ASN PRO GLN VAL TYR ARG LEU GLY GLU SEQRES 10 A 143 VAL GLU LEU ASP VAL TYR VAL ILE GLY GLU THR PRO ALA SEQRES 11 A 143 GLY ASN LEU ALA GLY ILE SER THR LYS VAL VAL GLU THR HELIX 1 1 THR A 12 ALA A 23 1 12 HELIX 2 2 GLU A 52 THR A 58 1 7 HELIX 3 3 ASP A 70 PHE A 75 1 6 HELIX 4 4 GLU A 88 LYS A 104 1 17 SHEET 1 A 3 GLN A 111 LEU A 115 0 SHEET 2 A 3 LEU A 120 GLY A 126 -1 O TYR A 123 N TYR A 113 SHEET 3 A 3 ALA A 134 VAL A 140 -1 O ALA A 134 N GLY A 126 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000
Complete list - 25 20 Bytes