Header list of 1iv0.pdb file
Complete list - b 23 2 Bytes
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 08-MAR-02 1IV0
TITLE SOLUTION STRUCTURE OF THE YQGF-FAMILY PROTEIN (N-TERMINAL FRAGMENT)
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: N-TERMINAL FRAGMENT;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS;
SOURCE 3 ORGANISM_TAXID: 274;
SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);
SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET15B
KEYWDS HYPOTHETICAL PROTEIN, RNASEH-LIKE, YQGF, STRUCTURAL GENOMICS, RIKEN
KEYWDS 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 10
AUTHOR M.INOUE,T.KIGAWA,S.KURAMITSU,S.YOKOYAMA,RIKEN STRUCTURAL
AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 3 23-FEB-22 1IV0 1 REMARK
REVDAT 2 24-FEB-09 1IV0 1 VERSN
REVDAT 1 07-OCT-03 1IV0 0
JRNL AUTH M.INOUE,T.KIGAWA,S.YOKOYAMA
JRNL TITL SOLUTION STRUCTURE OF THE YQGF-FAMILY PROTEIN (N-TERMINAL
JRNL TITL 2 FRAGMENT)
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : NMRPIPE 1.8, CNS 1.0
REMARK 3 AUTHORS : DELAGLIO (NMRPIPE), BRUNGER (CNS)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1IV0 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-MAR-02.
REMARK 100 THE DEPOSITION ID IS D_1000005301.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 328
REMARK 210 PH : 6.0
REMARK 210 IONIC STRENGTH : 100MM
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 1MM PROTEIN U-15N, 13C; 20MM
REMARK 210 SODIUM PHOSPHATE BUFFER; 100MM
REMARK 210 NACL; 90% H2O, 10% D2O; 1MM
REMARK 210 PROTEIN U-15N; 20MM SODIUM
REMARK 210 PHOSPHATE BUFFER; 100MM NACL; 90%
REMARK 210 H2O, 10% D2O
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N
REMARK 210 -SEPARATED_NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ
REMARK 210 SPECTROMETER MODEL : AVANCE
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : CNS 1.0
REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS,SIMULATED
REMARK 210 ANNEALING
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10
REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR
REMARK 210 SPECTROSCOPY.
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 GLU A 10 34.65 178.16
REMARK 500 1 ALA A 11 -48.04 168.53
REMARK 500 1 LEU A 24 -70.98 -64.52
REMARK 500 1 ALA A 25 -42.17 170.66
REMARK 500 1 SER A 26 137.66 60.19
REMARK 500 1 ARG A 28 -43.12 179.17
REMARK 500 1 TYR A 30 150.05 179.96
REMARK 500 1 LYS A 34 -149.79 -137.23
REMARK 500 1 LYS A 54 130.97 178.19
REMARK 500 1 LEU A 61 126.99 62.00
REMARK 500 1 THR A 63 126.70 69.19
REMARK 500 1 ASP A 64 138.37 178.48
REMARK 500 1 GLU A 67 145.81 61.92
REMARK 500 1 SER A 68 -150.73 -162.60
REMARK 500 1 ALA A 71 135.38 60.76
REMARK 500 1 LYS A 73 49.38 -86.82
REMARK 500 1 ASP A 92 -149.88 -71.10
REMARK 500 1 THR A 96 129.30 -176.04
REMARK 500 2 GLU A 10 105.79 -178.65
REMARK 500 2 ALA A 25 135.26 76.52
REMARK 500 2 SER A 26 131.14 179.76
REMARK 500 2 ARG A 28 -44.12 -155.33
REMARK 500 2 TYR A 30 140.92 -179.72
REMARK 500 2 LYS A 34 -153.21 -150.49
REMARK 500 2 THR A 35 -158.60 -86.78
REMARK 500 2 LYS A 54 127.05 -178.30
REMARK 500 2 ASP A 64 -170.75 45.35
REMARK 500 2 ALA A 71 -135.10 53.20
REMARK 500 2 LYS A 73 31.87 -158.79
REMARK 500 2 ASP A 92 36.20 -174.35
REMARK 500 2 ARG A 94 37.27 -156.55
REMARK 500 2 PHE A 95 131.46 60.34
REMARK 500 3 LEU A 24 127.29 61.80
REMARK 500 3 SER A 26 137.41 66.71
REMARK 500 3 TYR A 30 150.47 179.79
REMARK 500 3 LYS A 34 -120.30 -128.05
REMARK 500 3 LEU A 36 -68.83 0.08
REMARK 500 3 THR A 63 46.11 -82.20
REMARK 500 3 LEU A 65 46.69 -80.53
REMARK 500 3 LYS A 66 31.54 -95.63
REMARK 500 3 SER A 68 -46.76 -177.79
REMARK 500 3 GLN A 70 134.50 -171.34
REMARK 500 3 LYS A 73 28.91 -154.46
REMARK 500 3 ASP A 92 126.34 68.03
REMARK 500 3 THR A 96 -41.87 -165.89
REMARK 500 3 THR A 97 -54.27 72.26
REMARK 500 4 ALA A 11 -52.85 75.54
REMARK 500 4 LEU A 24 125.63 60.89
REMARK 500 4 ALA A 25 40.50 175.45
REMARK 500 4 LYS A 34 -155.41 -147.97
REMARK 500
REMARK 500 THIS ENTRY HAS 159 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: TTK003001690.1 RELATED DB: TARGETDB
DBREF 1IV0 A 1 98 UNP P83694 P83694_THETH 1 98
SEQRES 1 A 98 MET ARG VAL GLY ALA LEU ASP VAL GLY GLU ALA ARG ILE
SEQRES 2 A 98 GLY LEU ALA VAL GLY GLU GLU GLY VAL PRO LEU ALA SER
SEQRES 3 A 98 GLY ARG GLY TYR LEU VAL ARG LYS THR LEU GLU GLU ASP
SEQRES 4 A 98 VAL GLU ALA LEU LEU ASP PHE VAL ARG ARG GLU GLY LEU
SEQRES 5 A 98 GLY LYS LEU VAL VAL GLY LEU PRO LEU ARG THR ASP LEU
SEQRES 6 A 98 LYS GLU SER ALA GLN ALA GLY LYS VAL LEU PRO LEU VAL
SEQRES 7 A 98 GLU ALA LEU ARG ALA ARG GLY VAL GLU VAL GLU LEU TRP
SEQRES 8 A 98 ASP GLU ARG PHE THR THR LYS
HELIX 1 1 THR A 35 GLU A 50 1 16
HELIX 2 2 VAL A 74 ARG A 84 1 11
SHEET 1 A 5 ARG A 28 VAL A 32 0
SHEET 2 A 5 ARG A 12 GLY A 18 -1 N ILE A 13 O LEU A 31
SHEET 3 A 5 VAL A 3 VAL A 8 -1 N ALA A 5 O ALA A 16
SHEET 4 A 5 LYS A 54 GLY A 58 1 O VAL A 56 N GLY A 4
SHEET 5 A 5 GLU A 87 TRP A 91 1 O GLU A 87 N LEU A 55
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - b 23 2 Bytes