Header list of 1i4b.pdb file
Complete list - 23 202 Bytes
HEADER RNA 20-FEB-01 1I4B
TITLE THE SOLUTION STRUCTURE OF THE MAJOR FAMILY OF THE MUTANT STEM LOOP C
TITLE 2 5'UUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA
CAVEAT 1I4B INCORRECT CARBON CHIRAL CENTER(S)
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: 5'-R(*GP*GP*UP*GP*CP*UP*UP*AP*GP*CP*AP*CP*C)-3';
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES;
COMPND 5 OTHER_DETAILS: THE MAJOR STRUCTURAL FAMILY OF 5'UUA3' MUTANT TRILOOP
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES;
SOURCE 3 OTHER_DETAILS: THIS SEQUENCE IS A MUTANT TRILOOP OF WHICH WILD TYPE
SOURCE 4 SEQUENCE IS NATURALLY OCCURED IN BMV (+) STRAND RNA
KEYWDS RNA, TRILOOP, STEM-LOOP, MUTANT, REPLICATION, BMV
EXPDTA SOLUTION NMR
MDLTYP MINIMIZED AVERAGE
AUTHOR I.TINOCO JR.,C.-H.KIM
REVDAT 5 23-FEB-22 1I4B 1 REMARK
REVDAT 4 24-FEB-09 1I4B 1 VERSN
REVDAT 3 25-APR-06 1I4B 3 ATOM JRNL REMARK
REVDAT 2 01-APR-03 1I4B 1 JRNL
REVDAT 1 21-APR-01 1I4B 0
JRNL AUTH C.-H.KIM,I.TINOCO JR.
JRNL TITL STRUCTURAL AND THERMODYNAMIC STUDIES ON MUTANT RNA MOTIFS
JRNL TITL 2 THAT IMPAIR THE SPECIFICITY BETWEEN A VIRAL REPLICASE AND
JRNL TITL 3 ITS PROMOTER
JRNL REF J.MOL.BIOL. V. 307 827 2001
JRNL REFN ISSN 0022-2836
JRNL PMID 11273704
JRNL DOI 10.1006/JMBI.2001.4497
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH C.C.KAO
REMARK 1 TITL RNA MOTIFS THAT DETERMINE SPECIFICITY BETWEEN A VIRAL
REMARK 1 TITL 2 REPLICASE AND ITS PROMOTER
REMARK 1 REF NAT.STRUCT.BIOL. V. 7 415 2000
REMARK 1 REFN ISSN 1072-8368
REMARK 1 DOI 10.1038/75202
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : FELIX 95, X-PLOR 3.1
REMARK 3 AUTHORS : BRUGER, A. (X-PLOR)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1I4B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-FEB-01.
REMARK 100 THE DEPOSITION ID IS D_1000012886.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 283
REMARK 210 PH : 6.5
REMARK 210 IONIC STRENGTH : 5MM NACL
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 2MM 5'UUA3' TRILOOP, UNLABELED,
REMARK 210 5MM SODIUM PHOSPHATE BUFFER, PH
REMARK 210 6.5
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; DQF-COSY
REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ
REMARK 210 SPECTROMETER MODEL : AVANCE; AMX
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : X-PLOR 3.1
REMARK 210 METHOD USED : SIMULATED ANNEALING
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1
REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 HO2' A A 11 O4' C A 12 1.44
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1ESH RELATED DB: PDB
REMARK 900 THE SOLUTION STRUCTURE OF THE STEM LOOP C 5'AUA3' TRILOOP OF BROME
REMARK 900 MOSAIC VIRUS (+) STRAND RNA
REMARK 900 RELATED ID: 1I46 RELATED DB: PDB
REMARK 900 THE SOLUTION STRUCTURE OF THE MUTANT STEM LOOP C 5'GUA3' TRILOOP OF
REMARK 900 BROME MOSAIC VIRUS (+) STRAND RNA
DBREF 1I4B A 1 13 PDB 1I4B 1I4B 1 13
SEQRES 1 A 13 G G U G C U U A G C A C C
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
Complete list - 23 202 Bytes